Oncorhynchus gorbuscha (pink salmon): 123997558
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Entry
123997558 CDS
T07892
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123997558
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123997558
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
123997558
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123997558
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123997558
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123997558
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123997558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
123997558
NCBI-ProteinID:
XP_046157882
LinkDB
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Position
LG15:complement(57229699..57241047)
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AA seq
853 aa
AA seq
DB search
MAEVSEVLMSVLSTIRVPRPGDRVHKDECALSFSSPESEGGLYVCMNSFLGFGSQYVDRH
HTRSGQRAYLHISRTRKAPKEDEENSGSGDPPKKKPTRLAIGIEGGFNVEQEQYEEEVKV
VLFPDRQEVASDDLATMPDLVRERVSLAMAGLMSADSVSHALQVQQWDGEVRAESRHAVE
LKQLDNGTKIPPSGWRCEVCDLQENLWMNLSDGRVFCGRRYFDGSGGNNHALLHFQQTGH
PLAVKLGTITPDGADVYSYDEDDMVLDPKLPEHLSHFGIDMMTMEKTEHTMTELEIAVNQ
RVGEWEVIQESGATLRPLSGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNIDKIF
DEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGEGSEPSSEPRGDQVGIAARMFKALV
GRGHPEFSTNRQQDAQEFLLHFINMVERNCRSGVNPSEAFRFLVEERIVCQQSQKAKYTQ
RVDYILQLPVPMDQATNTEELQEAERRREEADSSGAPPPTPVRACIPFTACMAALSEPET
LTDFWSSAAQAKTTATKTTRFASFPDHMVIQVKKFTFGQDWVPKKLDVSIDVPDTLDLTA
LRGTGQQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQL
CEMGFPLEACRKAVYYTGNTGIDAAMNWVMGHMDDPDFSAPMVLPGTSSAPGTTPTESVS
EEHLATIVSMGFSRDQATRALRATSNVLERAVDWIFSHLDDLESMEVSEGGRSAAESEGS
REPPPGPKVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPK
DLGYLYFYRRVTE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtaagcgaggttttgatgtcggttctgtccacaattcgggttccgaggccc
ggggaccgtgtccacaaagacgaatgcgccttgtcattttcttctccggagagtgaagga
ggcttatatgtgtgcatgaacagtttccttgggttcggcagccagtatgtggatagacac
cacaccaggagcggacagcgggcttacctgcacatctcccgaactcgcaaagctccgaag
gaagatgaggagaactctggatccggtgacccacccaagaagaagccaacccgattagcc
ataggtatcgagggagggttcaacgtggagcaggagcagtatgaggaggaagtaaaagtc
gtcctcttccctgatagacaggaagttgcatccgatgacctcgccaccatgccggacctt
gtgagagagcgggtatctctagccatggcagggctgatgtctgcagactcagtgtctcat
gccctgcaggtgcagcagtgggacggcgaggtgcgggcggagtcccggcatgccgtcgaa
ctcaagcagctcgacaacggcaccaagatccctcccagtggttggcggtgtgaggtgtgt
gacctgcaggagaacctgtggatgaacctgtcggacggaagggtgttctgcggtcgcagg
tatttcgatgggtccggggggaacaaccatgccctcctgcacttccagcagacgggacac
cctctagccgtcaaactaggcaccatcacccccgacggagcagatgtgtactcctatgac
gaggatgatatggtactggatccaaagctccccgaacacctgtcccactttggcatcgac
atgatgaccatggaaaagacggagcatacgatgacagagctggagatagcggtgaaccag
cgtgtgggggagtgggaggtgatccaggagtcaggggccaccctccggcctctgtcaggc
cccggcctcactggcatgaagaacctgggcaacagctgctacctcaactcggtcatgcaa
gtcctcttcaccgtgcctgacttccagagcaagtacgtctccaacattgacaagatcttc
gatgaagctccaagcgaccccacccaggacttcaaaacccaagtagcaaagctgggctat
ggtctgttgtcgggcgagtattccaaaccagcacctgaccccggagagggctctgaaccc
agctctgaacccagaggtgaccaggttggcatagcggcacgcatgttcaaagcacttgtt
gggcggggccacccagagttctccaccaatcggcaacaagatgcccaggagttcttacta
cacttcattaatatggtggagagaaactgtcgttcgggagtgaacccgtctgaagccttc
cgtttcctagtagaggagaggattgtgtgtcagcaatcacagaaagcaaagtacacacag
agggtggactacatcctccagctacctgtgcccatggaccaggccaccaacaccgaggag
ctgcaggaggctgagcgtcggcgcgaggaggcagactcgtcgggagcccctccccccacg
ccagtgcgcgcctgtatcccgttcacagcgtgcatggcggcgctcagcgaaccggagacg
ctcacagacttctggagctcagccgcgcaggccaagaccaccgccaccaagaccacccgc
tttgcctctttccctgaccacatggttatccaggttaagaagttcacttttggacaggac
tgggtccccaagaaactggacgtaagcatcgacgttcccgacacgctggacctgactgcg
ctccgtgggaccggccagcagccgggggaggagcttctgccagaggtggccccaccccct
ctcatgacccctgacgtggaggtcaaaggtatcctgggttcccacggcaacgaggaggac
gactctctctactccccactactgtccccagtcctggatgactccaccgtgtcccagttg
tgtgagatgggattcccactggaggcctgcaggaaggctgtgtactatactgggaatact
ggaatcgacgcagccatgaactgggtcatgggccacatggacgacccagatttctccgct
cccatggtgttgccaggcaccagctctgctcccggaactacgcccacagagagcgtttct
gaggagcacctcgcaaccatcgtctccatgggcttcagccgagaccaggccacgcgagca
ctgagggccacgagtaatgtcctagagcgtgctgtggactggatcttctcccacttggat
gatctagagtccatggaagtttcggaggggggtcgctcggccgccgagagtgaggggtcc
agggagccccctcctgggcctaaagtcagagacggacctggcaagtatgagctgtttgcc
ttcatcagtcacatgggcacgagcactatgtgcggccactacgtctgccacatcaagaag
gaccaacagtgggttatctttaacgatcagaaagtgtgtgcctcagagaagccgcctaag
gacctgggttacctctacttctaccggagagtcaccgagtga
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