Oncorhynchus gorbuscha (pink salmon): 123997587
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Entry
123997587 CDS
T07892
Name
(RefSeq) multiple PDZ domain protein-like
KO
K06092
InaD-like protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123997587
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
DctP
Motif
Other DBs
NCBI-GeneID:
123997587
NCBI-ProteinID:
XP_046157939
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All DBs
Position
LG02:complement(14236395..14467286)
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AA seq
1665 aa
AA seq
DB search
MYENVPTVSMVERQQVLQALERLQAKMAQREEWTHSERLGVLRDALQSPLLGHILTLQHS
IKQLKDQGRQTEHISLPKPLSGGLGFSVVGLGAEGTGDHGVFIRHVQPRSIAHGDGRIQE
NDQILVINGTPLDQSVTQHQAIALLQQPGDRVDLVVARDPATIAQHTHTLPPQLPPGPSH
KEQWGHMEEMELLNDGSGLGFGIVGGKATGVVVRTLVPNSVADKDGRLRTGDHILRIGET
PTGGLTSDQVIKVLQGCGSHVRMLIARDPSGQYSTFPPPPPPPSTSPVSVLPSGVEPQSR
IHRTPNLEGYEIHKVPLRKKEGQSLGITIIGYNSLTREDAVGVFVKNVVPGSAAEQSGNI
RIYDRIIELDGVSLQGFTNQEVLEVMKQTGQTVLLTLVRKIASPKPSLERSLDKGVEEIS
LSELELKDKWEQSLGPQYDVLVVELDPVIEDDAELQNYSKLLPIHTMRLGVELDSFDGHH
YISSVAPEGPVAKHGLLRPEDELLEVNAVQLYGKSRREAVAFLREVPPPFTLVCCRHLTE
ENSDYQHDRDDKWRSPSTAASLSEMEAKLSSVWVSQAYRRDPTGDQLQQDRATLKEISEE
DRATLKEISEEDRATLKEISEEDRATLKEISEEDRATLKEISEEDQATLKEITEEEQVPT
WNEEGELALWSPDIQLLELEKRERGLGFSIQDYQVKEEGGDGTVEKLESRALFDQLSLGQ
SVNSWVETGDSEADLDSRNGRSELILTDTDSVHLIGTERRKRRGQGGGRHSDLPEREEGE
GEETPAFSHWGPPHRVEVWQEDCESLGISIVGGHSVIKRLKNGEELKGIFIKQVLPESPA
GRTRSLKTGDKIVQVSGVDLQNASHEEAVQVIKTAPSPVVFIVQSLSATPRPVSLTAPSY
RKHKAKSRVMPQKAEVGGAPPPMRLPPPYRPPGQLTEDQDEELEGVKELIRLRYGELCGE
LLCVELDRERQGLGLSLAGNKDRSCLSIFVVGISPGGPAAKDGRIRVGDELLEINNQVLY
GRSHLNASAIIKSASSKVKITLIRNEDAINQMAVPPFPNPPVVLSSTETPKPAAVASPAP
TEKSQTPESLALGRGPLEASISISEVKSSVGSSGSTATELVSREATLKILRDTSSKKASE
NKAESSESVTVLAAETPLGQTANLSKTCRLSCKLPVVSSVKGELVPPPASILPSSCSSPD
FEYCSKDTATCPIVPGQEIIIEIAKGRSGLGLSIVGGKDTQLDAIVIHEVYEEGAAARDG
RLWAGDQILEVNGVDLRSVAHEDAITALRQTPAKVCLKVLRDEARYRDQENLDVFSVELQ
KKAGRGLGLSIVSKRNGTGVFISDVVKGGAAELDGRLMQGDQIISVNGDDMRSAMQETVA
AILKCARGVVLLELGRLKAASWLSSRRPSQGSQQMSHVSANSTIFTPHPLPNSTPSTSQL
LNNVRKPMTVGMTSSQSAETGIRTVEITRGPTDALGISIAGGKDSPLGDIPIFLAMIQAN
GVAAKTHRLKVGDRIVSINSQSLEGLSHGDVVTMLKNAYGSIILQVIADTNISAIASQVE
SMSTSSCSETQPGETEAPKPKSICLEKGSDGLGFSIVGGFGSPHGDLPIYIKTVFSKGAA
AVDGRLKRGDQILSVNGESLEGTTHELAVAILKRQKGAVTLDVRS
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaatgtcccaacagtctccatggtggagcgccaacaggtattgcaggctttg
gagcggctgcaggccaagatggcccagagggaggagtggacccacagtgagaggctgggg
gtgctgagggatgctctacagagcccactgctaggacacatcctcacgctgcagcattca
atcaaacaactcaaagaccaggggaggcagacagagcacatcagcctgcctaagcccttg
tctgggggcctgggcttcagtgtggtgggtctaggggccgaagggacaggggaccacggg
gtcttcatcagacacgtccagcctaggagcatcgcacacggggatgggcgcatacaggag
aacgaccagatcctggtgatcaacgggacgcccctggaccagagtgtcacccagcatcag
gccatcgctctcctgcagcagcctggggacagggtggatctagtggtggccagggatcct
gccaccatcgcacagcatacacacaccctcccgccccaactcccgcctgggcccagtcac
aaggagcagtggggccacatggaggagatggagctgctgaacgacggctcgggcctgggc
tttgggattgttggaggcaaggccactggggtggtggtgcggactctggttccaaacagt
gtggctgacaaggatgggcgcctgcgtacaggtgaccacatcctgcgtattggtgagacc
cccacaggtggcttgaccagcgaccaggtgatcaaggtgctgcagggctgcgggagccac
gtgcgcatgctcatcgcccgtgacccctcgggacagtactccaccttcccgccgcctcct
cccccgccctccaccagccccgtctctgtcttaccctctggagtcgaaccccagagtagg
atccacaggacgcccaacctggagggttatgagattcataaagtgcctctgaggaagaag
gagggccagagcctggggatcaccatcatcggatacaactccttaacccgcgaagacgcg
gtcggggtgtttgtgaagaacgtggttcctgggagtgccgctgagcagagcggaaacatc
cggatctatgacagaataatagagctggacggggtgagcctgcagggcttcactaaccag
gaggttctggaggtgatgaagcagacaggccagacggtcctcctcaccctggtcaggaag
atagcctcgcccaaaccgtcactggagaggtccctggacaaaggtgtggaggagatctct
ctgtctgagctggagctgaaggacaaatgggagcagtctctggggccacagtacgatgtt
ctggtggttgaactggaccctgttattgaagatgatgctgaactacagaattactccaag
ctactacccatccacaccatgcgtctgggggtggagttggactcgtttgacggccaccac
tacatctcctctgtggccccagaaggtcctgtggccaaacacggcctcctgagaccagag
gacgaactactagaggtaaacgcggtgcagctgtacggcaagtcgaggcgcgaggcggtg
gcgttccttcgtgaggttccccctcccttcaccctagtgtgctgcagacacctgacagag
gagaactcagactaccagcatgaccgggacgataagtggcgctcgcccagcactgctgcc
agcctctctgagatggaagccaagctgtcttctgtatgggttagtcaggcataccgccga
gaccctactggtgaccagcttcagcaggaccgagccaccctaaaggagatctcagaggag
gaccgagccaccctgaaggagatctcagaggaggaccgagccaccctgaaggagatctca
gaggaggaccgagccaccctgaaggagatctcagaggaggaccgagccaccctgaaggag
atctcagaggaggaccaagccaccctgaaggagatcacagaggaggagcaagtgcccaca
tggaatgaagagggagagctggctctgtggtccccagacatccagttgttggagctggag
aagagagagagaggcctgggcttcagcatacaagactaccaggtgaaggaggaaggtgga
gatggtactgtggagaagctggagtccagagccctctttgatcagctctctctaggtcag
tctgtgaattcctgggtggagactggggacagcgaggcggacttggactccaggaacgga
agatcagaactcatcctcacagacacagactcggtgcatttgattggcacagagaggaga
aagaggaggggccagggaggaggacgacacagtgatctacctgagagggaggaaggagag
ggagaggagacccctgccttcagtcactggggacccccacacagagtggaggtgtggcag
gaggattgcgagtctcttggcatcagcatcgtgggcgggcacagcgtcatcaagagactg
aagaatggagaggaactcaagggcatctttatcaagcaggtactgccggagagcccagcg
ggacgcactcgctccctcaagactggagacaagatagtgcaggtatcaggtgtggacctc
cagaatgccagtcatgaggaggcagtccaggtcatcaagacagctcccagtcccgtggtc
ttcatcgttcagagcctctctgccacgccaaggcctgtctcactaacggcgcccagttac
agaaaacacaaggcaaagagcagagtcatgccgcagaaagcagaagtaggaggtgcccct
cccccgatgagactccccccgccctaccggccacccggtcagctgacagaggaccaggac
gaagagctggagggagtcaaagagctgatcaggttgcgttacggagagctgtgcggggag
ctgctgtgtgtggagctggacagggaacgccagggcctgggtctgagcctggctggaaac
aaggaccgctcctgcctcagcatctttgtggtaggcatcagccccgggggccccgccgcc
aaggacggacgcatccgcgtaggggacgagctgctggagatcaacaaccaggtcctgtat
ggccgcagccacctgaacgcctcggccatcatcaagagcgcctcgtccaaggtcaagatt
accctgatcaggaatgaagatgctatcaaccagatggccgttcccccctttccaaaccct
cctgttgtcctctcctccactgaaacccccaaaccagctgcagtagcatccccggccccc
acagagaagtctcaaaccccagagagcctggccctcggcaggggacccctggaggcctcc
atctccatcagcgaggtgaagtccagtgttgggtccagtgggagcacagctacggagctt
gtgtccagagaagcaacactcaagatcctgcgagatacttcgtcaaagaaggcctcagag
aacaaggcggagtcttcagagagtgtgactgtgctggctgccgagacccccctggggcag
actgcgaacctgtccaaaacctgtcggctctcctgtaagctgcctgtggtgagctctgtg
aaaggggagctggtgccccctcctgcctctatcctaccttcctcctgcagcagcccagac
tttgagtactgcagcaaagacacagccacgtgccctatcgttccaggccaggagataatc
atagagatcgccaagggtcgctctggcctgggtctcagcattgtagggggaaaagacacc
cagctggatgccatagtgatccatgaggtatatgaggagggggcggcggcacgtgatgga
cgactctgggctggagatcagatcctggaggtaaatggtgtggacctgcgtagcgtggcc
catgaggatgccatcacagccctaaggcagactccggccaaggtgtgtcttaaggttcta
cgggacgaggcgaggtaccgcgaccaggagaacctagatgtgttcagtgtggaactgcag
aaaaaggctggccgtggcctgggcctcagtatcgtcagcaagaggaacggcacaggggtg
ttcatctcggacgtggtgaaagggggcgccgccgagctggatggccggctgatgcaaggg
gaccagattatctctgtcaacggagatgacatgaggtctgccatgcaggagacggtagct
gccattctcaagtgtgccaggggcgtggtgctcctggagctgggccgactgaaggctgcc
tcctggctctcttccagacgtccctcccagggaagccagcagatgagtcacgtgagtgcc
aacagcacaatcttcacgccccaccccctgccaaactccaccccttccacctctcagctc
ctcaataacgtcaggaagccaatgacagtgggcatgacatcatcacagagcgcagaaaca
gggatacgcactgtggagattacaaggggtcctactgatgcattggggatcagtatagct
ggggggaaggacagtcctctgggggatatccccatcttcctggccatgatccaggccaac
ggggtggcagcaaagacacaccggctcaaggtgggtgataggatcgtgagtatcaactcc
cagtctctggaaggtctgtcccatggggatgtagtcaccatgctgaagaatgcttacggc
agcatcattctccaggtgattgctgacaccaacatcagtgctatagccagtcaggtggag
agtatgtcgactagcagctgctccgagacacagccaggggaaacagaagcccccaaaccc
aagagtatctgcctggagaagggttctgacggcctgggcttcagcatcgtaggaggcttc
ggaagccctcatggagacctgccaatctacatcaagactgtcttcagcaagggggcagca
gcggtggacgggcgtctgaagaggggtgaccagatcttgtctgtgaacggagagagtctg
gaagggaccacacacgagctggctgtggccatactgaagagacagaaaggggccgtcacc
ctggatgtgcggtcctag
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