Oncorhynchus gorbuscha (pink salmon): 123997704
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Entry
123997704 CDS
T07892
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
ogo03015
mRNA surveillance pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123997704
09122 Translation
03013 Nucleocytoplasmic transport
123997704
03015 mRNA surveillance pathway
123997704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123997704
03041 Spliceosome [BR:
ogo03041
]
123997704
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123997704
Spliceosome [BR:
ogo03041
]
Complex C
Other components
EJC/TREX
123997704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
123997704
NCBI-ProteinID:
XP_046158147
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All DBs
Position
LG15:63412592..63416308
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AA seq
175 aa
AA seq
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MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagagaaggcaaagaggagaaagggtcgaggtttt
ggttcagaggagggagcaaggtccagagtgagagaggactatgataccgtggagcaggat
ggagatgagccaggtcctcagagatctgtggagggttggatcctttttgtgactggggta
catgaagaggccactgaggaggacatccacgacaagtttgccgagttcggagagatcaag
aacctacatctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacatacaaagaagcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagccgatcagtgtggactggggcttcgtcagaggaccacccaagagcaagaggagg
ggtggtggacgtagacgcagcaggagtccagacaggagacgacgttga
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