KEGG   Oncorhynchus gorbuscha (pink salmon): 123997738
Entry
123997738         CDS       T07892                                 
Name
(RefSeq) nestin-like isoform X1
  KO
K07609  nestin
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ogo04812]
    123997738
Cytoskeleton proteins [BR:ogo04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type VI
     123997738
SSDB
Motif
Pfam: Filament CATRA-C
Other DBs
NCBI-GeneID: 123997738
NCBI-ProteinID: XP_046158204
LinkDB
Position
LG15:63986049..63997003
AA seq 2151 aa
MELHRLRHHHSHRTDDKLQMLNLNQRLETYLGRVRLLEEENKLLCQEIQALRGSGQGGRM
GLEDKLSLARQEVEEVWREKDRVELELGSLGEELYVLGLQRQWEADAHGEVKKKLADSRK
QMEEERRAQIWLGEKVSQLEKQIQFQIKTHQEDVAGFQATLIHVRPALPPPPPQTGTQLP
SLQELGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRLAQVGQEKNESQLKLHALE
NELQSAQDRRQCLERSVAKQRDMQRQEIQNLQAHLDVLEMEKGALGNQIDTLLTESRGLL
QLKMSLGMEVATYRALLDNESLKGDFSSTNQLRSTYISDGVPSSRGVKQSFQTQLATSHM
IRPISTIHRASPRSNVTLMSTSPIWTQNRVTLNETPESCRKTGEHIDFGVGSNHQVSCST
PFPKVPQDGISAHPFSPQDVHKEVNYAEPLSPPTEEAGADVVSWLGSDHKEQSMWDLEKE
EEDQNIVRTWFAEEKPVLESAMSHRVETSFSMPTVFSTDAQELYSPSVSYERAGSVTGAH
SAFSANDDNDVPFEMSFEKEEPLLDLPYGPMNASEERDLETAKKDAEWVGNEGLESETAS
VLEQAFETFTSSQAFEYGAGKSYNKPIEFNQEDNMSYESTQASHGSEEAFRHVKRLEEDV
IHPPKEDENDMSNKHEEQLEDELHPYGYGKEDRERLGGFIKENDMTERIDKFNQEEMISY
ESAQASHWSEEVFHHVERVEEGDIHFTKVDDENDMSNKREEQHALNPNGEVKDAWDRVGG
YNEENGIGERMYDWKEAKYHVKEEEMWNNRETKPNRSDQEYIPSNEEKLKQFEQEQIPSG
GEKLNQSEQRYINSNGEKLNQSEQRYINSNGEKLNQSEQEQIPSGGEKLNQSEQRYINSN
GEKLNQSEQEHIPSGGEKLNQSEQEQIPSGGEKLNQSEQEHIPSGGEKLNQSEQEQIPSG
GEKLNQSEQEQIPSGGEKLNQSEQEQIPSGGEKLNQSEQEQIPSGGQKLNQSEQEHIPSG
GEKLNQSEQEQIPSGGEKLNQSEQEQIPSGGEKLNQSEQEHIPSGGEKLNQSEQEQIPSG
GEKLNQSEQEQIPSGGEKLNQSEQEHIPSGGEKLNQSEQEQIPSCGEKLNQSEQRYINSN
GEKLNQSEQEHIPSGGEKLNQSEQEHIPSGGEKLNQSEQEQIPSGGEKLNQSEQEHIPSG
GEKLNQSEQEQIPSGGEKLNQSEQEQIPSGGEKLNQSEQEQIPSGGEKLNISDNDKEDHD
EANYCQNNSVSCRAELEGDSYAQDNTLADTHPLIRYKSDETDVNTQASHMGESDSSDGEE
DREVCQTGTDTWGEGKSKQFDTMEDLCEESEGDVIDQERNMGSTHQEDMDASQTKEHATQ
ENDEENAVDQLIQEAEEEQSYEELTEPGEYSMVCSDEDYNEERIDRLVEQELENLSISSY
SEHFTGQMIESESVLSLQIESHTELNQTQDILYSEEVEQIHSERLNQSEQEYIPSGGEKR
NLNAQEHIPSDGENLNQSEQEYIPSGGEKLNLYVQENIPSDGEKLNQSEPEYIISGGEKL
NQSETEDITSGGETLDICEQEHISSDREKMNQSEQENIPLGGETLDICEQEHISSDREKM
NQSEQEDITSGGEKLNQSEPEYIISGGEKLSQSEQENIPSGGEKMNQSDPEYIPSCAEKL
NQSEQECIPSGAEKLNQSEQECIPSGAEKQNQSEQECIPPGAEKQNQSEQERIPSGGEKL
NQSEQERIPSGGEKLNQSEQECIPPGAEKLNQSEQERIPSGGEKLNQSEQECIPSGGEKL
NQSEQERIPSGGEKLNQSEQERIPPGAEKQNQSEQECISSEVMYSVHSRILMTPEHTSVR
EGSVEISKAEYLAQGKVFSGGLGTEAVPDKIEGQDDQNLYMSTHADFTESHSIYSSLNSR
PESQTDMNNLDIEESNSTDDESPNASQYLQPVTKANLTADQEDLLDVAVSHYEDCNTLIK
HSAEEVTSYQASNECLQTDEWEVLESPNKHLESGDPFAGHKRDSERSSKTDSEGRDLHSF
LSSGVQNNFWGSNLETGAPYQPDEPYDHVTDLPNQNLALANNLSWVDLENPQATNWNTKM
DSDTPKASTLEEEDKQMPSQVKQLVCKDVVEGVNVTSEGSEDGDSWSSGEE
NT seq 6456 nt   +upstreamnt  +downstreamnt
atggagctccaccgcctccgacaccaccacagccaccggactgacgacaagctccagatg
ctgaacctcaaccaacgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagatccaggccctgaggggcagcggccagggggggcggatg
ggcctggaggacaagctgagcctggccaggcaagaggtagaggaagtctggagggagaag
gatcgggtggagctggagctagggagcctgggtgaagagctctacgtcctggggctgcag
agacagtgggaggcggacgcccatggggaggtgaagaagaagctggcagacagcaggaag
cagatggaggaggagaggagggctcagatctggttaggagagaaggtgagccagctagag
aaacaaatccagttccagataaaaacccaccaggaagatgttgccggcttccaggctaca
ctaatccatgtcagacctgcactgccaccccctccaccccaaacgggcacccagctgccc
agcctccaggagctgggtgaggagtactcccagatggctgtcagggcgtggcatgaggcg
gccatggtgtttcagggccaggtggacagcctggacgagtctctaaaccaggccagaacc
cggttggcccaggtgggccaagagaagaatgagagccaactgaaacttcatgccctggag
aatgagctgcaatcagcccaggatagaaggcagtgtctggagaggagtgtggccaaacag
agagacatgcagaggcaagagatacaaaacctgcaggcccatctggacgtgttggagatg
gagaagggggcgctgggaaatcagattgacactctcctgacagaaagtaggggtctgctg
cagctgaagatgtctctgggcatggaggtggccacatacagagctttactggacaatgaa
agtctgaagggggatttctcttcaacaaatcagctaaggagcacctacatctctgatgga
gtgcccagctcccgaggggttaagcaaagcttccagacacagctggctaccagtcacatg
atcaggcccatctctaccatccatagagcaagcccacgatccaatgtgacattgatgtcc
acatcaccaatctggactcaaaatcgggtaactctgaatgaaacacctgagagttgtcga
aagacaggagagcatatcgactttggcgtagggtccaaccaccaggtaagttgttcaacg
cctttccccaaagtaccacaggacggaatttcagcccaccccttcagtccccaagatgtc
cataaagaagtcaactatgctgagcctctctcacctcccactgaagaggcaggtgctgat
gttgtatcttggcttggatctgaccacaaggaacaatccatgtgggatttggaaaaggag
gaagaggatcagaacatagtcagaacctggtttgctgaagagaaacccgttctggaatct
gccatgagtcaccgggtcgagaccagcttcagtatgccaactgtgttcagcactgatgct
caagagctctacagcccttcagtgagctatgagagagcaggttcggtgacaggggcacat
tctgctttctcagcgaatgatgataatgatgtaccttttgaaatgtcttttgaaaaagag
gaacctctactagatctgccttatggtcccatgaatgcatcggaggaaagagatcttgaa
acagcaaagaaagatgctgaatgggtgggaaatgaaggcttggaatctgaaactgcatca
gtgctagaacaagcatttgagaccttcacaagcagtcaagcttttgagtatggggcgggg
aaaagttacaacaagccaatagagttcaaccaagaggacaatatgtcatatgaatccact
caagcctcccacggttcagaagaggcatttcgccatgttaaaagactggaggaagatgtt
attcatcccccaaaagaggatgaaaatgatatgtctaacaaacatgaggagcaattggaa
gatgaattgcacccctatgggtatggtaaggaggatcgtgaaagattgggaggattcatt
aaggaaaatgatatgacagaaagaatcgataagttcaaccaagaggagatgatctcatat
gaatctgctcaagcttctcactggtcagaagaggtatttcaccatgttgaaagagtggag
gaaggtgacatacatttcacaaaagtggatgatgaaaatgatatgtctaacaaacgtgag
gaacaacatgcactgaaccccaatggggaggtaaaggatgcatgggatagagtgggaggg
tacaatgaagagaatggaattggagaaagaatgtatgattggaaagaagcaaagtatcat
gtgaaagaggaagagatgtggaataacagagaaaccaaacccaatcggtctgatcaagag
tatataccttcaaatgaagagaaactaaagcaattcgagcaagagcaaataccttcaggc
ggagagaaactgaatcaatctgagcaaaggtatatcaattcaaatggagagaaactgaat
caatctgagcaaaggtatatcaattcaaatggagagaaactgaatcaatctgagcaagag
caaataccttcaggcggagagaaactgaatcaatctgagcaaaggtatatcaattcaaac
ggagagaaactgaatcaatctgagcaagagcatataccttcaggcggagagaaactgaat
caatctgagcaagagcaaataccttcaggcggagagaaactgaatcaatctgagcaagag
catataccttcaggcggagagaaactgaatcaatctgagcaagagcaaataccttcaggc
ggagagaaactgaatcaatctgagcaagagcaaataccttcaggcggagagaaactgaat
caatctgagcaagagcaaataccttcaggcggagagaaactgaatcaatctgagcaagag
caaataccttcaggcggacagaaactgaatcaatctgagcaagagcatataccttcaggc
ggagagaaactgaatcaatctgagcaagagcaaataccttcaggcggagagaaactgaat
caatctgagcaagagcaaataccttcaggcggagagaaactgaatcaatctgagcaagag
catataccttcaggcggagagaaactgaatcaatctgagcaagagcaaataccttcagga
ggagagaaactgaatcaatctgagcaagagcaaataccttcaggcggagagaaactgaat
caatctgagcaagagcatataccttcaggcggagagaaactgaatcaatctgagcaagag
caaataccttcatgcggagagaaactgaatcaatctgagcaaaggtatatcaattcaaac
ggagagaaactgaatcaatctgagcaagagcatataccttcaggcggagagaaactgaat
caatctgagcaagagcatataccttcaggcggagagaaactgaatcaatctgagcaagag
caaataccttcaggaggagagaaactgaatcaatctgagcaagagcatataccttcaggc
ggagagaaactgaatcaatctgagcaagagcaaataccttcaggaggagagaaactgaat
caatctgagcaagagcaaataccttcaggaggagagaaactgaatcaatctgagcaagag
caaataccttcaggaggagagaaactgaacatatccgacaatgacaaagaggatcatgat
gaggcaaactactgtcaaaataattctgtttcatgtagggctgagctagaaggcgacagc
tatgctcaggacaacacactagccgacacacaccccttgatccgttacaagagtgacgag
actgatgtcaacactcaggcttcacacatgggcgagagtgactccagtgatggtgaagag
gacagggaggtttgccagacaggaacagacacctggggcgaaggcaagtccaaacagttt
gacaccatggaggatctgtgtgaagagtcagaaggggatgtcatagatcaggaacgtaac
atgggctccactcaccaagaggacatggatgctagccaaacaaaggagcatgctacacag
gagaacgatgaggagaatgctgtagatcagttgattcaggaggcggaagaggagcaatcc
tatgaggaacttacagaacctggagagtactccatggtgtgctctgatgaggactataat
gaagaaagaattgatagattggtggagcaagagcttgagaacttatctatatccagttac
agtgaacactttactgggcagatgattgagagtgagtcagtactgagtcttcaaattgag
tctcacactgaacttaaccagacacaagacatattatacagtgaggaggtagagcagata
cactcagagagactgaatcaatctgaacaagagtatataccctcaggcggagagaaacgg
aatctaaatgcacaagaacacataccctcagatggagagaatctgaatcaatctgaacaa
gagtatataccctcaggcggagagaaactgaatctatatgtgcaagaaaacataccctca
gatggagagaaactgaatcaatctgagccagagtatataatttcaggcggagagaaactg
aatcaatccgagacagaggatataacttcaggcggagagacactggatatatgtgagcaa
gaacatatatcctcagacagagagaaaatgaatcaatccgagcaagaaaatataccttta
ggcggagagacactggatatatgtgagcaagaacatatatcctcagacagagagaaaatg
aatcaatctgaacaagaggatataacttcaggcggagaaaaactgaatcaatccgagcca
gagtatataatttcaggcggagagaaactgagtcaatctgaacaagagaatataccttca
ggtggagagaaaatgaatcaatccgatcccgagtatataccttcatgtgcagagaaacta
aatcagtctgagcaagagtgtataccttcaggtgcagagaaactgaatcagtctgagcaa
gagtgtataccttcaggtgcagagaaacagaatcagtctgagcaagagtgtatacctcca
ggtgcagagaaacagaatcagtctgagcaagagcgtataccttcaggtggagagaaactg
aatcagtctgagcaagagcgtataccttcaggtggagagaaactgaatcagtctgagcaa
gagtgtatacctccaggtgcagagaaactgaatcagtctgagcaagagcgtataccttca
ggtggagagaaactgaatcagtctgagcaagagtgtataccttcaggtggagagaaactg
aatcagtctgagcaagagcgtataccttcaggtggagagaaactgaatcagtctgagcaa
gagcgtatacctccaggtgcagagaaacagaatcagtctgagcaagagtgtatttcctca
gaggttatgtattcggtgcactctaggattctaatgacacctgaacacacatctgttaga
gaaggttcagtagaaatatccaaagcagaatatttggctcaaggtaaggtattcagtggg
ggactgggaactgaagctgtaccagacaaaatagaaggacaggatgaccagaacctttat
atgtcgactcatgcagacttcactgaaagccattctatctacagcagtttaaacagcagg
cctgagagtcaaactgacatgaacaacttggatatagaagagtccaacagcacagatgat
gagtcgccaaatgcaagccagtatttgcaacctgtcaccaaagcaaatctaactgcagat
caggaagacttgttagatgtggcagtctctcactatgaggattgcaatactcttattaaa
cattctgcagaagaggtcactagctatcaggcaagtaatgaatgtcttcagacagatgaa
tgggaagtcttagaaagtccaaacaaacacctggaatctggagatccttttgcaggtcac
aagagagactccgagagatcatccaaaactgacagcgaaggccgggacctccacagcttc
ctcagctctggtgtacaaaacaacttctggggttccaatctggagacaggagccccctat
caaccggatgagccatatgaccatgtgaccgatctacccaatcagaacctagccttggct
aacaacctatcttgggtggatttggagaatccacaggcaactaattggaacacaaagatg
gacagtgacacacctaaagcttccacccttgaagaagaggacaaacagatgccctcacag
gtgaagcagcttgtttgtaaagatgtggtagagggtgtgaatgttacttctgaaggttct
gaagatggagactcctggtcatctggggaagaatag

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