Oncorhynchus gorbuscha (pink salmon): 123997739
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Entry
123997739 CDS
T07892
Symbol
myo1f
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-If
KO
K10356
myosin I
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123997739 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
123997739 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123997739 (myo1f)
03036 Chromosome and associated proteins [BR:
ogo03036
]
123997739 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
123997739 (myo1f)
04147 Exosome [BR:
ogo04147
]
123997739 (myo1f)
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123997739 (myo1f)
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Phagocytosis
Others
123997739 (myo1f)
Others
Actin-binding proteins
Myosins
123997739 (myo1f)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123997739 (myo1f)
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
123997739 (myo1f)
Exosome [BR:
ogo04147
]
Exosomal proteins
Proteins found in most exosomes
123997739 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_9
SH3_2
nSTAND3
IQ
NPHP3_N
AAA_16
ABC_tran
AAA_22
Microtub_bd
RapZ-like_N
Sigma54_activat
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
123997739
NCBI-ProteinID:
XP_046158206
LinkDB
All DBs
Position
LG15:34970433..34992682
Genome browser
AA seq
1092 aa
AA seq
DB search
MGSKYHWQSQNVKQSGVDDMVLLSKISEDAIVENLKKRYMDDYIFTYIGSVLISVNPFKQ
MPYFTDREIELYQGAAQYENPPHIYALTDNMYRNMMIDQENQCVIISGESGAGKTVAAKY
IMGYISKVSGGGDKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEP
DGGKISNFLLEKSRVVSQNENERNFHVYYQLIEGANPQQKEALGIMTPEYYYYLNQSGTY
KVDGTNDSKDFQETMEAMNVIGIPEAYQAQGLQIITGILHLGNISFIEAGNYGQVESTDL
LAFPAYLLGVDPTRLQDKLTSRKMDSKWGGKSESIDVTLNQEQATYTRDALAKALYTRLF
DYLVEAINKAIQKPHEEYSIGVLDIYGFEIFQRNGFEQFCINFVNEKLQQIFIELTLKAE
QEEYVQEGIKWTPIEYFNNKVVCDLIENKLNPPGIMSVLDDVCATMHAKGEGADGTLLQK
LSAAVGTHEHFNSWNSGFVIHHYAGKVSYEINGFCERNRDVLFTDLIELMQSSEHDFIRS
LFPENLNTDKKSRPTTASSKIKKQANDLVNTLMKCTPHYIRCIKPNETKRPKDWEESRAK
HQVEYLGLRENIRVRRAGYAYRRVFNKFLQRYAILTAETWPCWRGGEQQGVLHLLRSVNM
DTDQYQMGRSKVFVKAPESLFLLEEMRERKFDMFARTIQKAWRRYIARRKYEQMREEASD
ILYNSKERRRNSINRNFVGDYLGLEQRPELRQFLAKRERVDFADSVNKFDRRFNSIKRDL
ILSPKGIYLIGREKVKKGPEKGQIKEVLKRKLEFESIHSVSLSMRQDDFFIVHEAQYDSL
LESNFKTEFLSLLCKRYEEVTKNKLSLSFNDRLEFRVKKEGWGGGGTRVVVFQRGQGDQA
EIKPAGKTLTINVGDGLPKTSKPTKKGSPQNHGGGRSQPPSRGHQNGAPRVRGAPPPQQP
EQTYSIPQKQNRPPAPPSKLGSLNTRRGSAQTQQGNLDFLNVPDQGVSGMQRKRSISSQR
PPPAPSSRPKAQPRPTGPRCRALYQYAGQDTDELSFDTNDIIDLLNEDASGWWRGRFCGK
EGLFPGNHVEKI
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtaagtatcactggcagagtcagaatgtcaagcagagtggtgtggacgacatg
gtgctactgtccaagatcagtgaagacgccatcgtggagaacctgaagaagagatacatg
gatgactacatcttcacctatattggctccgtgttgatatcagtgaaccctttcaaacag
atgccctacttcactgaccgggaaattgaactctaccaaggggctgcccagtatgaaaac
cctccccacatctacgccctgactgataacatgtacaggaacatgatgattgatcaggag
aaccagtgtgttattatcagtggggagagtggagctgggaagactgtggctgcaaaatac
attatgggttacatatccaaagtatcaggaggaggtgataaagtgcagcatgtgaaggac
atcatcctccagtccaatcctctattagaggccttcggcaatgccaagactgtccgcaac
aacaactccagtcgctttggtaagtactttgagatccagtttagcagaggaggagagccg
gacggtggtaaaatctctaacttccttcttgagaagtcgagggtggtgagccagaatgag
aacgagaggaacttccacgtctactaccagctaatagaaggagccaacccccagcagaaa
gaagccctgggcatcatgactccagagtactactactacctgaaccagtctgggacatac
aaagtggacggaaccaacgacagcaaggactttcaggagacaatggaagccatgaatgtg
attgggatcccagaggcctaccaggctcaggggctgcagatcataacaggaatcctgcac
cttggaaacatcagcttcatagaggcaggcaactatgggcaggtggagagcactgacttg
cttgcctttcctgcctatctgctgggcgttgacccaacacgtctgcaagacaaactgacc
agcagaaagatggactcaaagtggggtggaaagtctgagtccatcgatgtgacactcaat
caagaacaagccacctatacccgagacgccctggctaaggccctctacacacgactcttt
gactacctggtggaggcaataaacaaagccatacagaaacctcatgaagaatacagtata
ggagtacttgacatatatggctttgagatatttcagaggaatgggtttgagcagttctgc
atcaactttgtcaacgagaagctacagcagatatttattgagctgacactgaaggctgaa
caggaagagtatgttcaggaaggcatcaagtggacaccaattgagtatttcaacaacaag
gttgtgtgtgacctcatcgagaataagttgaacccgccaggcatcatgagtgtgctggat
gatgtgtgtgccaccatgcatgccaagggtgagggggcagatggcaccctgctccagaag
ctctctgcggcggtgggcactcacgaacacttcaacagctggaactctggctttgtcatc
caccactatgcaggcaaggtctcctacgaaataaatggcttctgtgagagaaaccgggac
gtgctttttactgacctcattgaactcatgcagagcagtgaacatgacttcatccgcagc
ctcttccctgaaaacctcaacacagacaagaagagcaggcccactactgctagctctaag
atcaagaaacaagccaatgatctggtgaacacgttgatgaagtgcaccccccactatatc
cgatgtatcaaacccaacgagactaagagacccaaggactgggaggagagccgggccaag
caccaggtggagtaccttgggctgcgggagaacatccgtgtgcgtcgagccggctacgcc
taccgcagagtcttcaataagttcctacagaggtatgccatcctgacggcagagacgtgg
ccgtgctggcgggggggagagcagcagggggtcctgcatctcctccgctctgtcaacatg
gacacagatcagtaccagatggggcgctccaaggtctttgtcaaggccccagagtcgctc
ttcctattggaagagatgcgggagaggaaattcgacatgttcgccaggaccatccagaag
gcctggagaaggtatatcgccaggaggaaatatgaacagatgagggaggaggcctcggac
atcctgtacaactctaaggagcggaggaggaacagcatcaacaggaactttgtaggagac
tatctgggcctggagcagaggcctgagctcagacagttcctggccaagagggagcgagtc
gactttgcagactcggtcaacaagtttgaccgcaggttcaattccatcaagagggacctg
attctgtctcccaagggcatctacctgataggcagagagaaggtgaagaaggggccagag
aagggacagataaaagaggtgttaaagaggaagctggagtttgagagcatccactctgtc
tctctcagtatgagacaggatgatttcttcatcgtgcatgaggctcagtatgacagtctg
ctagagtccaacttcaagacagagttcctcagcctgctctgtaagcgctatgaagaggtg
accaagaacaagctgtctctctccttcaacgacagactggagttccgggtgaagaaggag
ggctggggtggaggtggcacccgtgttgtggtgttccagaggggacagggagaccaggca
gagatcaaaccagctggaaagaccctcaccatcaacgtgggagacggcctgccaaagacc
tccaagcccaccaagaagggatctccacagaaccatggagggggcaggagtcagcctcct
agcagagggcaccagaatggtgcacccagagttagaggtgctccaccgccccagcagcca
gagcaaacctactccatcccccagaaacagaaccggcccccagcgccgccctccaaactg
ggctccctgaatacaagacgaggctcggctcagactcagcaggggaacctggacttcctt
aacgtgcctgaccagggcgtgtctggaatgcagaggaagaggagtatcagcagccagcgg
ccacccccggccccatccagccggcccaaggcccagccacgccccaccggcccgcgttgc
cgggcgctgtaccagtatgctggccaagacacagacgagctcagcttcgacaccaatgat
atcatcgacctgctcaatgaagatgcatcaggctggtggagaggcaggttttgtggcaag
gaaggactcttccctgggaaccacgtggagaagatctga
DBGET
integrated database retrieval system
