Oncorhynchus gorbuscha (pink salmon): 123997766
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Entry
123997766 CDS
T07892
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein-like isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123997766
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
123997766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40_CDC20-Fz
Patched
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
123997766
NCBI-ProteinID:
XP_046158257
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All DBs
Position
LG15:complement(64865081..64905180)
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AA seq
1308 aa
AA seq
DB search
MAMDCIGSSDAFKLGILGSIVRRSLDAPRHSVLARPPDGRQLTPPPRMTVRERLREKISA
AFYRHGLLCASYPVPIILFTSASILACCYPLLRLPLPGTGPVEFTTRVRDYTVPSHEPQG
DLGERPDWYRGPPVAYIQQVLVKAAVSPWDSTLVPVDVFRSPLGRVFSLLEEIRNHVHND
GSGVRSLEALCLQVTDLLPGLRRMQTVLPEHGCLLVSPGNYWQNQRELFDSDPDLLKTVH
QHEPKGLHTSATLRDLLFGVPVKHTGVSLYSRKRVVTYTITMVLGSYDARFLSSLRARLR
QLHPSVNCSLREDHMVHVHFKEEIGMAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLA
LAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLE
VKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMFFF
TTVLSIDIRRMELADLNRRLPAEAGMPPPKPGPLRPREAPPPPRPSPYTITLQTPAFRNL
RLPKRLRVVYFLARTRLAQRFIMVGTVIWIGILAYTDPAGLRTYLAAQVSEQSPLGEGGA
GGLPPHLGVASVFPGPGGDPASTLSVLPAPAEPTPLPENQSQGHHGAPREGVPHQAQAPP
LVPQISWGAEDEEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPVTLHLSPREAIETR
HPQDTRHPPPPSLKTNDLPADLTLYKVAALGLAAGVLLVLLLFCLYRVLCPRNYGQNGVA
HGRRRRGDLPCDDYGYSPPISEISPLLLRGHSMDIECLASDGMLLASCCLAGQIRVWDAQ
TGDCLTVIPKHGLRRSSSSGCWEQRDGWDAVGVAEPENLGGGTEPGGEFFDEDEGYPLRR
RTTPRPALFEDQPDLTPLIDTNFDSQPPSHLLLTPPRDGFDFGGLVERAYLEHEPPSPGL
TASYPSPPSGPPPQRRRSLGYIQPPVPQGQGTPDWESAVWAMELRGNLIAAGRSSGKLEL
WDAVEGSLRCSNEDGVSGITALAFLNNRIVAARLDGSLDFFTVDINKPLGLLQYRGPPGR
SNIPPSPCYSSEDVISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDSCC
LFTLQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTS
CVISSGLDDLICIWDRSTGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNSGD
LLQTVYLGQSSDGQGVRQLVVLNNAAIVCDFGSELSLVYVPSVLEKLD
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggactgtataggatccagcgatgccttcaaactggggattttaggaagcatc
gttaggaggtccctggatgccccacggcactccgtcctcgctcgccctcccgatggccgg
cagctgaccccgccccccaggatgacggtgagagagcggctgcgagagaagatctcggcg
gcgttttaccgccatgggctgctttgcgcttcctatccggtgcccatcatcctcttcacc
tctgccagtattctcgcctgctgttaccccctgctgcggctgcctctgccggggaccggg
ccggtggagttcaccacacgggtccgagattataccgtcccttcccatgagccccaggga
gacctcggcgagcggcctgactggtatcggggtcctccggtggcctacatccagcaggtc
ctggtgaaggcagctgtgtctccctgggacagtacgctggtccctgtggacgtgttccgc
tccccactgggccgcgtattcagcctgctggaggagatccgcaaccatgtacacaacgac
ggttctggggtcaggagcctggaggcgctctgcctgcaggtgactgacctgttgccgggg
ttacggcgtatgcagacagtgctgccggagcacggttgtctgctggtctcccccggcaat
tactggcagaaccagcgggagctgtttgactctgaccccgacctgctgaagaccgtccac
cagcacgaaccgaaaggactgcacacctccgccacactgagagacctgctgtttggcgtc
ccggtgaaacacacaggggttagtctgtacagcaggaagagggtggtcacctacaccatc
accatggtcctgggcagctacgacgccaggttcctgtctagcctgcgggcgcgtctccgc
cagctgcacccctcggtgaactgcagcctgcgcgaggaccacatggtgcacgtgcacttc
aaggaggagataggcatggccgagctcatccccctggtcaccacctacatcatacttttc
gcctacatctacttctccacacgtaagattgacatggtgaagtcaaaatggggcttggcg
ctggctgccgtggtaacagtgctcagctctctgcttatgtctgtggggctctgcaccctg
ttcggcctgacgcccacactcaatggaggtgagatcttcccctatctggtggtggtgata
gggctggagaacgtcctggttctcaccaagtctgtggtgtccacccctgttgacctggag
gtcaaactacgcatcgctcagggccttagtaatgagagctggtctatcatgaagaacatg
gccacagagctgtgcatcatcctcataggatatttcaccctggtgcctgctatccaggag
ttctgtctgtttgctgtggtggggctggtgtctgacttcttccttcagatgtttttcttc
accacagttctttctattgacatccgacgcatggagttggccgatctgaaccgccgtcta
ccggccgaggcggggatgccccctcccaaaccgggccccctgcgccctcgggaggcgcct
cctcccccacggccctcgccctacaccatcacccttcagacgcccgccttcaggaacctg
cgtctgcccaagaggctccgtgtggtctacttcctggcccgcacacgtctggcccagcgc
ttcatcatggtgggtacagtgatctggattggcatcctggcctacacggatcccgctggc
ctccgtacctacctggcagcccaggtgtctgaacagagccccctgggggagggcggggcc
gggggtctgcccccccacctgggagtagcctcggtcttccctggaccaggaggggaccct
gccagcaccctcagtgtcctccctgcccccgctgaacccaccccacttccagagaaccag
tcccagggtcaccacggggcccccagggaaggagtaccccaccaggcccaggccccaccc
ctggtgccccagatcagctggggggcggaggatgaggagggctggaggaggctgtctttc
agacactggccctcgctcttcagctactataatattactctggccaagagatacatcagc
atcctgcctgtcattcccgtcacgcttcacctgagcccccgggaggccatcgagacgcgc
cacccccaggacacacgtcaccccccgccgcccagcctcaaaactaacgacctacccgca
gacctcacgctctacaaggtagcagctctgggcctggcggcaggggttctgctggtgctg
ctgctcttctgtctctaccgggtcctctgtccccgcaactatggacagaacggagtggcc
catggacgccgtcgccgcggtgacctgccctgcgacgactacggctactcgccacccatc
agcgagatctcccccctgctgctgcgtggacacagcatggatatagagtgtctggcgagt
gatggcatgctgttggccagttgttgtctggcaggacagatccgtgtgtgggacgctcag
actggagactgcctcactgtcattcctaaacatgggctgcggcggagtagtagcagtggc
tgctgggaacaacgggatggctgggacgccgtgggtgtggccgaacctgagaatctggga
ggcgggacagaaccagggggcgagtttttcgatgaggatgagggctatcccctcaggcgg
cggaccaccccacgcccggccctctttgaggaccaacccgacctcacccccctcatcgac
accaacttcgactcccagcccccctcccacctcctcctcaccccgcccagggatggcttt
gacttcggtgggctggtggagagagcctacctagagcacgagcctccctcgccgggcctc
actgcctcctacccctcccccccatcgggaccccctccccagaggagacgcagcctgggg
tacatccagccccctgttccacagggccagggaaccccggactgggaaagcgccgtgtgg
gccatggagcttcgggggaacctcattgctgctgggaggagcagcggcaaactggagctg
tgggatgcagtggagggctcgttacgctgcagtaatgaagacggcgtctcggggatcacg
gccctggccttcctcaacaacaggatcgtggcggccagactcgacggctctctagacttc
ttcactgtcgacatcaacaagcctctgggcttactgcagtacagaggtcctcccgggcgt
agtaacataccgccctcgccctgctacagcagtgaggatgtgatctcatgccagctgacg
cgctcggtgcagtgtgcccaccagaaacccatcacggtgctgcgagccgctgcaggcaga
gtggtcactggcagccaggatcacacggtcagggtatatcgactggaggactcatgctgt
ctcttcacgctccagggccactctgggggaatcactgccatctacatagaccagaccatg
gttctggccagtggggggcaggacggagcaatctgtctgtgggatgtgctgacgggcagc
cgggtgagccacgtgtacggtcaccgcggcgacgtgacctcgctggtgtgcaccacatcg
tgcgtgatcagcagcggccttgacgacctcatctgcatctgggaccgcagcacgggcatc
aagctctactccatacagcaggaggtgggctgtggtgctagtctgggggtgatctctgag
tctctcctggtgacagggggccagggctgtgtgtccttctgggacctgaactccggggac
ctcctccagacggtctacctgggccagagcagcgacggccagggggtccgccagctcgtg
gtgctgaacaatgccgccatcgtctgtgactttggctccgagctcagcctggtctatgta
ccctctgtgctggagaagctggactga
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