Oncorhynchus gorbuscha (pink salmon): 123997775
Help
Entry
123997775 CDS
T07892
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
ogo04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123997775 (smc1b)
04114 Oocyte meiosis
123997775 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123997775 (smc1b)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123997775 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
123997775 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Stimulus_sens_1
Motif
Other DBs
NCBI-GeneID:
123997775
NCBI-ProteinID:
XP_046158315
LinkDB
All DBs
Position
LG01:complement(13765573..13782898)
Genome browser
AA seq
1236 aa
AA seq
DB search
MGFLKQLDVDNFKSWRGKQVIGPFKRFNCIIGTNGSGKSNVMDALSFVMGERAATLRVKH
TRDLIHGAHIGKPVSTTASVTMRYCDDNGEELNFCRSISGDSSEYRINGRQITLAKYTEE
LEKIGIVTKARNCLVFQGAVESIAMKNPKERTKMFERISQSLELSDDYDRKKEALQKAKE
DTQFHFNKKKTATAEKKQVSSEKVEAQKYQELVDDLNQGRLQLNLFQLYHNQQGLSALSK
TLRKRQEAVAGQKTGLNGWEQSIKAQKKEHGRFTRELQQIEKEIRGQEQTLSLRRSQYIK
AKVNTAHHLKKVDDTRGALEKSQRMGAKKEEELAEFHQELQELERAWRDYERHAQEELTD
RNADIQLEEEQLERYKELKELARKQGALLSQQTKKMHWEVKADHQKIEFDQRRKKEVEVS
IKHSHTQLGDFTRRADKLEEYTNTCKSSLEESRQQEEVLSAELQRGRVRVEEVNQELGEV
LGELQNARLDSQESKRQQQRNEVLENLRRLCPDSLFGRLVDLCSPIHKKYQLAVTKVFGR
YMNAIVVSSEKVARDCIRFVKEERAEPETFLPIDYLDVSPLNERLRGVRGAKMMVDVVQC
SPTAPQLKKVIQFVCGNALVCETLKEARAIAFDGPERLKTVALDGTMFSKSGVISGGSSH
LRSKARRWDEKDMTKLKELKEQLTAELRGLVKLKRKEPELKQIQSQAQGVQTRLKYSHTE
LDTLRKKSIPNCHAEMSRLEAELANVESQLEMQKENMEIKELEMKKLQDRINQMEDVVFS
DFCAEIGVANIREYEQEHLKQQQDVDRKRLEFESQRTCLKAQLEYEQGQLEQQRKKMKKL
EETIAKEQCRVEEQKQEEEKLLVVMEESQSKVLDLKNHLLGKKTQAFDSKAQVDQTMKSL
QESSREQVKLQREVISAETALEQLRIWKHNLLLGCKIQGLPITLLSGSLDEISEVQLDSE
SLTESTCTTMDIYEREALMVIDYSGLGAELKDLAGEEVDPQVERLKETVSSLEGVLQRST
APNLKALEKMRVVKDKYQGVVDAFDASTKAARRSNQEFEQVKAKRSRLFSQCFEHVSVVI
DQIYKQLCRNTSAQAILSAENPDEPYLDGINYNCIAPGKRFMAMDNLSGGEKAIAALALV
FAIHSFRPAPFFVLDEVDAALDNTNIGKVTSFIREQSRESLQIIVISLKEEFYSRADALL
GVYPEFNDCMFSRMLTLDLSPYPLNEENGTERGKEM
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctaaaacagctagatgtggataattttaagtcttggcgagggaagcaagta
attggaccttttaaaaggtttaactgtattattggcacaaatggatccggtaagtcgaac
gtgatggatgccctgagcttcgtgatgggggaacgggcagcgactctccgcgtgaagcac
accagggacctcatccacggagcccacattggcaagccggtgtccaccacggccagcgtc
accatgcgctactgcgacgacaacggagaggagctcaacttctgtaggagcatatcgggg
gactcctctgagtatcgcatcaatggcagacaaatcacccttgccaagtacacagaggaa
ctggagaagataggcattgtgactaaagctagaaactgtctggtattccagggggcggtg
gagtccattgccatgaagaaccccaaggagcggaccaagatgtttgagcgcatcagccag
tctctggagctgtctgatgactatgacaggaagaaggaggctctgcagaaggctaaagaa
gacacgcagttccacttcaacaagaagaagacagccaccgcagagaagaaacaggtctcc
tcagagaaagtggaggcccagaagtaccaggagttggtggacgacctgaaccaggggagg
ctgcagctaaacctgttccagctgtaccacaaccagcagggcctgagtgccctgtcaaag
accctgaggaagagacaggaggctgtggccggtcagaagacaggactgaatgggtgggag
cagagcatcaaggcccagaagaaagaacatggacgctttaccagagagctgcagcagatt
gagaaggagatccgtgggcaggagcagaccctgtccctgcgtcggtcccagtacatcaag
gccaaggtgaatacggcccaccacctaaagaaggtagatgatacccgtggggccctggag
aagagccagaggatgggtgccaagaaagaggaggagctggctgagttccatcaggagctc
caggagctggagagggcctggagggactatgagagacatgcccaggaggagttgaccgac
cggaacgctgacatacagctggaggaggaacagttggagcgctataaggagctgaaggag
ctggccaggaagcagggggccctcctgtcccagcagactaagaagatgcactgggaggtc
aaggctgaccaccagaaaatcgagtttgaccagcggaggaagaaagaagtggaggtaagc
attaagcacagccatactcagctgggggacttcacgaggagagcagataaactggaggag
tacaccaacacctgcaagagctctctggaggagtctcgtcagcaggaggaggtgctgtct
gcggaactgcagagagggagggtgagggtggaggaggtgaaccaggagttaggggaggta
ctgggagagctgcagaacgccaggctggacagccaggagagtaagaggcagcagcaacgc
aacgaggtcctggaaaacctccgcagactctgccctgactcactgtttggtcgtttggtg
gacctgtgcagccccatccataagaagtaccagctggccgtcaccaaggtgtttggacgc
tacatgaacgccatagtagtgtcgtcagagaaggtggctcgggactgcatccgctttgtc
aaagaggagagggccgaaccagaaaccttcttacccatagattacctggacgtgagccct
ctgaatgagcggctgcgcggggtgcgtggagctaagatgatggtggacgtggtgcagtgt
tcccctaccgctcctcagctgaagaaagtcatccagtttgtgtgtggcaacgctctggtc
tgtgagacactcaaagaggccagagccatcgccttcgacgggcctgagcgactcaagacg
gtggctctggatggtaccatgttctccaagtcaggggtgatctctgggggctccagccac
ctgcggagcaaggcccggcgctgggacgagaaggacatgaccaagctgaaggagctcaaa
gaacagctgactgcagagctacgtggtctggtgaagctgaagcgtaaggagcctgagctg
aaacagatccagtctcaggctcagggggttcagacccgtctgaagtactcccacactgaa
ctggacaccctccgcaagaagagcattcccaactgccacgcggagatgtctcgcctggag
gctgagctggccaacgtggagtctcagctggagatgcagaaagagaacatggagatcaag
gagctggagatgaagaagctccaagacaggatcaaccagatggaggacgtggtgttctcg
gacttctgtgctgagataggagtggccaacatcagggagtatgaacaggagcatctcaaa
cagcagcaggatgtagacaggaaacggttggagtttgagtctcagcggacctgtctgaag
gcccagttggagtatgaacagggtcaactggagcagcagaggaagaagatgaagaaacta
gaggagaccattgccaaggagcagtgcagagtggaagaacagaagcaggaggaagagaag
ctgctggtggtgatggaagagagtcaatctaaagtgttggatctgaagaatcatctgctg
gggaagaagacccaggcttttgactctaaggcccaggtggaccaaacgatgaagagtctt
caggagagctccagagagcaggtgaagctgcaaagggaggttatctcagctgagacagcc
ctggagcagttgaggatctggaaacacaacctgctgctaggttgtaagatccagggcctg
cccatcacgctgctgtctggcagcttggacgagatcagtgaggtgcagctggactcagag
tcactcacagagagcacctgcaccactatggacatctacgagagagaagcgctgatggtc
atcgactactctggcctgggagctgagctgaaggatcttgcaggggaggaggtggacccc
caggtagagcgtcttaaggagacagtgtcctctctagagggggtcctacagcgctccaca
gcccccaaccttaaagccctggagaaaatgagggtggtcaaggacaaataccagggggtg
gtggacgcgtttgatgccagcaccaaggcagccagaaggagtaaccaggagtttgagcag
gttaaagccaaacgctccagactcttcagtcagtgctttgaacacgtctctgtcgtcatc
gaccagatctacaaacaactgtgcaggaacaccagcgctcaggccattctgagtgctgag
aacccagatgagccctacctggatggcatcaattacaactgtattgctcctgggaaacgc
ttcatggccatggacaacctttctggaggagagaaggccatcgctgccctggctctggtg
ttcgcaatacacagcttccgtccagctccgttctttgtcctggatgaggttgatgcagcc
ctggacaacaccaatattggcaaagtgaccagctttatcagggagcagtcgagagagagc
ctccagatcatcgtcatctctctgaaggaggagttctactctagagctgacgctctgctg
ggggtctaccctgagtttaacgactgcatgttcagccgcatgctgacgctggacctaagt
ccctatcccctgaacgaagagaacggaacagagagagggaaggagatgtaa
DBGET
integrated database retrieval system
