Oncorhynchus gorbuscha (pink salmon): 123997846
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Entry
123997846 CDS
T07892
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04514
Cell adhesion molecules
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123997846
04514 Cell adhesion molecules
123997846
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123997846
09142 Cell motility
04820 Cytoskeleton in muscle cells
123997846
04810 Regulation of actin cytoskeleton
123997846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123997846
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin alpha subunits
123997846
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
123997846
NCBI-ProteinID:
XP_046158407
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Position
LG15:complement(67508666..67568091)
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AA seq
1056 aa
AA seq
DB search
MCAYRMYAFGGMLCRVVSVLWPVLSVVSGFNLHAERPAVYRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPLNPDPTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVYFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSSFLQEQAYILLDCGEDNECIPDLQLSASIDRTEL
VVGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIEALSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDSSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKENPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTDGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRY
RRATNAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTAMGTLVLWGTPDVAFAIPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARPPADDVSDREQLTSGQLADA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcctataggatgtatgcatttggtgggatgttgtgtcgcgtggtgtcggtgcta
tggcctgtcctttcggttgtctcgggcttcaacctgcatgcggagcgccctgcggtgtac
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtattggtgggagcacccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccctaaaccctgaccccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtactgtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggtggacctggcagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagggtccctggagagaaacacacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggccgttactgacctcaacggagatgggtatgatgatgtactggtaggagca
cctctctacatggagagagagagggagagtaaacccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacacc
tttggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaac
gacgtggcggtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctg
aaccctgatgaccgatcctgcctcctgacagaatctgataccatggtgacctgtctaagg
gtagatatttgtgcaaaggtgagcggtgtggggatcccagactctgtagtcctgaatgca
gagctgcaactggattggcttaaaggtgtgaggggcggagttaagagagtttatttcctg
gattcccatcagccccagcacacaggggtcctaacgcttggccacagccgtcctcactcc
tgcctgaactatactgtctacctacgaggggaggatgagtttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctgtc
ctcaaccgttacagcagtagcttcctgcaggaacaggcatatattctgctggactgtggg
gaagacaacgagtgtattccagacctccagctatctgcaagcatagaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagactgagttacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagaggctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgccggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacagctccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
ccgcattgggagcccaaagagaatccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagtagtatccgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacagac
ggaccaatcagctgccggagcaacaccagcctcaaccccctgggcctacagacatcctct
gtccaggacactccagaactgttgggctttctgaggaacagtagctctcctcaccgctac
agacgagccaccaatgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactctaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcc
ttaccccaacacaccactgcaatgggtacactggtgctgtggggaactcctgatgtggcg
tttgctattcctctgtgggtcatcatcctagccatccttctgggactgctggtcctggcc
atgctgacactggccatgtggaagtgtggtttctttgaccgggctcggccgccagcggat
gacgtgtcagaccgtgagcagctgacctctggccaattagcagacgcctaa
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