Oncorhynchus gorbuscha (pink salmon): 123997908
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Entry
123997908 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123997908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123997908
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123997908
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
HECT type E3
123997908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
123997908
NCBI-ProteinID:
XP_046158562
LinkDB
All DBs
Position
LG15:70025968..70071467
Genome browser
AA seq
2898 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNFNSHPHLNLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELTKPDGNDGSKLSGSGSGTGRSSRPGRTSDPPWFLSGSDT
LGRLAGNTLGSRWSSGVNGGSGGGGGGGGSSSSVGGAGGGGVGGAVSGGGGGGGSSGRSS
TAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVIIRE
LQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDAD
AMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASF
DTERGSTSREGEPSLDKKNIPVQSPVSLGEELQWWPDKDGVKFVSIGSLFSELVAVSSKG
ELYQWKWSEPEPYRNTQNPSIRHPRVSFLGLTNEKITLLSANSIRATVATETNKVATWMD
DTLSSVASKLEHSAQAYPELQGERIVSLHCCALYTCAQLESSLYWWGVVPFSQRKKMLEK
ARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKVGLLLESVWNM
NDSCRFQLRSPESLKNMDKAIKTQEIKTESKPELVKTEMGPPPSPASTCSDTSSIASSAS
LPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSS
VSSQPSQTSAPAPITDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPE
KAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERNVAIF
TAGQDSPVILRDGNGTIYPMAKDCMGGIRDPEWLDLPPIASLAMGVHSLANLPTNSTIKK
KAAIIILAVEKQTLMQHVLRCDFDACRQYLVNLEQAVLLEQSTNVLHSFLGHRCDGNRNI
LHACVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSS
SRGLRLREMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFI
LAPAVGSLTTASTGTSQGPSTSTIPGPSSEPSVVESKDRKANAHLILKLMCDSMVLRPHL
RELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMTKVGDTSMTEKVEADSVFMEMIC
PTGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGH
DCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTSPNSRGEHILLFL
VQTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWNAL
KSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITFID
TLLGTLVKELQNKYTPGRREEAVVVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIGK
CRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPL
PPRPSPDQSSNSSQTASSYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEGVA
GEEDHHEDQEEQGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASGR
RSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLLDEPLERTT
TASHVNSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPAAASSTGLIYIDPSNLRRSSAI
STSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPAAVK
LTYQDAVNLQNFVEDKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHASQHS
ARRERMTAREEASLRTLEGRRSGRAATLLTVRQGMMSARGDFLNYALSLMRSHNDEHSDV
LPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTTQMDRKRSREILELGLDNEDSEHEND
EDTNQSCFLVLEGRQARRKAVRQKRGKKKRAAPKGSTLQDKEDDAVPAEMGQNHPFFRRS
DSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSYTASKGLA
EATLDRSCMEVNMGSSQILPTKMSYSANLKNVMSMETSQRGREDQPMDQELVAPKPGPSP
HDLAAQLKSSLLAEIGLTESDGPPLPSFRPHCSFMGMVISHDMLLGRWRLSLELFGRVFM
EDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQSRDLALEVDRDRDQLIQQTMRQLNT
HFGRRCTTTPMAVHRVKVTFKDEPGEGSGVARSFYTAIALAFLSNDKLPNLDCVQSVSKG
MQASSTCHHDYNSSMTLNLMQRLRNRDRERERRSGGLRAGSRRDRDRDSRRQLSIDTRPF
RPASEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASKITGMLLELSPAQLLLLLASE
DSLRARVEEAMELLIAHGRENGADSILDLGLLEAPEKAQQQENRKRHGSTRSVVDMELDD
PEDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRILGLCLLQNELCPITLNRHV
IKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQAGEADAVFAAMDLAFAIDLCKEEGAGQ
VELLSGGVNMPVTPLNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNALEDLTAED
FRLLVNGCGEVNVQMLISFTSFNDESGTKTLARIHKESQRENADKLLQFKRWFWSIVEKM
SMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQ
ILKQKLLLAIKTKNFGFV
NT seq
8697 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatacacttcgtggttcacccgttgcccgggactgaggaccagctcaatgac
agacttcgtgaagtgtcggagaaactcaacaaatacaactttaacagtcatccacacctc
aacctgctggagcaggccaccttaaaacagtgtgtagttggaccaaaccatgctggcttt
ctgcttgaggatggacgtgtgtgtcggatcagctttgctgtccagcctgatcgtctggag
ctgaccaaaccagatggcaacgatggttcaaagttgagtggcagtggttcagggacagga
aggagctccaggccaggcaggactagtgatcctccctggttcctgtctggctctgacaca
ctgggcagactggcaggcaacacccttgggagtcgctggagctccggggtgaacggtgga
tcaggtggaggaggtggcggcggtggcagcagcagcagtgtaggaggtgcggggggagga
ggtgtaggaggagctgtcagtggaggtggtggtggtggaggctcctctgggaggtcgtct
acagctgccagggactcgagacgtcagaccagggtgatccgcacagggagggaccggggc
tctggtctcctgggcagccagccccagcctgtcatccctgcctctgtcatcccagaggaa
ctcatctcccaggctcaggtggtccttcaggggaagtctaggagtgtgatcatccgggag
ctccagaggaccaacctggatgtcaacctggccgtcaacaacctactgagcagagacgat
gaggacggtgacgatggcgatgacacagccagcgagtcctacctccctggagaggacctg
atgtccctgctggacgctgacatccactcagcccaccccagtgtcatcatcgatgctgac
gccatgttctctgaggacatcagctactttggctacccctccttcagacgctcctccctg
tcccgcctgggttcctcgcgagttctccttcttcccttagagcgtgactcagagctgttg
cgtgagcgtgagtctgtgttgaggttgcgggagcggaggtggctggatggggcctcattt
gacacagagagaggctccaccagccgcgagggggagcccagcctggacaagaagaacatc
cccgtccagagccctgtctctctgggcgaggagctgcagtggtggcctgacaaggatggt
gtaaagtttgtgagcatcgggtccttgttctctgagctggtggcagtgagctctaagggg
gaactctaccagtggaagtggagtgaaccagaaccatacagaaacacacagaacccttct
atccgccacccccgagtgtccttccttggcctgaccaatgagaagatcaccctgctgtcg
gctaacagcatcagagccaccgtggccacggagaccaataaggtggcgacctggatggat
gacaccttgagcagcgtggcgtccaagctggagcacagtgcccaggcctaccctgagctg
cagggggagcgcattgtgtctttgcactgctgtgccctctacacttgcgcccagttggag
agcagcctgtactggtggggtgttgtgccttttagtcaacggaaaaagatgcttgaaaag
gctagagccaagaacaagaagccaaagtccagtgccggcatctcctcaatacccaacatc
accgtgggaacgcaggtgtgcctgaggaataaccccctctaccacgccggtgccgttgcc
ttttctgtcaacgctgggatccccaaggtgggactgctcctcgagtctgtctggaacatg
aacgacagctgcaggttccagctgcgatcaccagagagcctcaagaacatggacaaggcc
atcaagacacaggagatcaaaacggagagcaagccggagttggtaaagactgagatgggc
ccccctccttccccggcctctacctgcagtgacacctcctccatcgctagtagtgcctcg
ctgccctacaaacgaaggcgctcgaccccggctcccaaagaggaggagaaggtgaacgag
gagcagtggcctcttcgggaagtggtgtttgtggaagatgttaaaaacgtccctgtggga
aaggtgctcaaagtggacggtgcgtatgtagctgtgaagtttccagggacgtcaagcagc
gtgagctcacagccgagtcagactagtgctccagctcccatcactgactctgacccctcc
tcactgctgcaggactgtaggctgctcagaatagacgagttacaggtggtaaaaactggt
ggaactcctaaagttccagattgcttccagcgtacacctaaaaaactctgcatcccagag
aaggctgagattctggctgtgaatgttgactccaaaggagtccacgcagtgctgaagact
ggtaactgggtgaggtactgtatatttgacctggccacaggcaaagcagagcaggagaat
aacttccccaccagtaacctggccttcctggggcagagtgaacgcaatgtagcgatcttc
accgctggacaggactctccagtcatccttcgggatggaaacggcacaatttacccaatg
gccaaagactgtatgggtgggatccgagaccctgagtggttggacctgccgcccatcgcc
agcctggccatgggggtacactccttggccaacctccccaccaactcaaccatcaagaag
aaagctgctattatcatattagctgtggagaagcagacgttgatgcagcacgtgctgcgt
tgtgactttgatgcctgtcgtcagtacctggtcaacctggagcaggctgttctcctggag
cagagtaccaacgttctccactccttcctgggccaccgctgcgacggcaaccgcaacatc
ctccacgcctgcgtctccgtctgcttcccagtcagcaacaaggagaccaaggaggaggaa
gaagctgaacggtctgagaggaatacgtttgcagagagactgtcagcagtggaggccatc
gccaacgcaatctccgtggtgtctagcaacagctctgggaacaggacaggctcttctagc
agcagagggctgcgtctgagggagatgatgaggcgctctctgagagcagcggggcttggc
cgtcatgagtctggcccctcctccagcgaccaccaggatcctgtgtccccacctatcgcc
cctcccagctgggtgcctgacccccctcccatggacccagatggtgacatagacttcatc
ctggcccctgcagtgggatctctcaccacagcctccacagggaccagccagggccccagc
acctccactataccaggcccctcctccgagccttcggtggtggagtctaaagaccgcaag
gccaacgcccacctcatcctcaaactgatgtgtgacagcatggttctcaggccacacctc
cgcgagctgctatccgccaaggatgcccgtggaatgaccccgttcatgctggcagtcagc
gggagagcttacccagctgccattactgttctggaggctgctcagaaaatgaccaaggtg
ggagacaccagcatgactgagaaggtggaagcagactctgtgttcatggagatgatttgt
cccacggggaccaaccctgacgactctcctctctacgtcctctgctgcaacgacacctgc
agcttcacctggacaggagctgaacacatcaaccaggatatctttgagtgccggacctgc
ggcctgttggagtctctctgctgctgcactgagtgcgccagggtgtgtcacaaaggacac
gactgcaaactcaagaggacctctcccactgcgtactgtgactgctgggagaagtgtaag
tgtaagactctgatcgctggacagaaagctgctcgcctggacctactgtacagactgctc
accaccactaacctggtcaccagtccaaacagccggggggagcatatccttctgttcctg
gtgcagactgttgctaggcagagtgtggagcactgccaataccggccccctcgcatcaga
gaagacaggaaccgcaaggctgccaatgctgaagactctgacatgccggaccatgacctg
gaacctccacgcttcgcccagctggccctggagagggtgctgcaggactggaatgctctc
aagtccatgataatgttcggatcccaggagaataaagacccgttgagtgccagcagccgt
atcgcccatctccttccggaggagcaggtgtacctgaaccagcagagtggcaccatccgc
ctggactgcttcacacactgcctcattgtcaagtgtgcccctgacattacatttattgac
accctgctggggaccttggtgaaggagctgcagaacaagtacactcctggccggagagag
gaggccgtcgtcgtcaccaggaggttcctgcgctccgtggccagggtgtttgttatcctc
agcgtcgagatggcttcgtccaaaaagaaaaataacttcattccccagcccattgggaaa
tgcaggcgtgtgttccaggccctgctgccctatgcggtggaggagctgtgcaacgtggcg
gagtcgctcatcgtgcctgtgaggatgggcatcgcccggcccactgcccccttcaccctg
gccagcaccagcatcgacgccgtgcagggcagcgaggaactcttctctgtggaacccttg
ccaccgagaccctccccagaccagtccagcaattctagtcagactgcatcgtcctacatc
atcaggaacccccagcctcgccgcagcagccagtcccagccggttagagggcgagacgag
gagcaggatgacattgtgtctgctgacgttgaagaggtagaggttgtcgagggtgttgcc
ggggaggaggatcaccatgaagaccaagaggaacagggagaggagaacgctgaggcagag
ggacagcatgatgaacatgatgaggatggaagtgacatggagttggatctgctggctgct
gcggagacggagagtgacagtgagagtaaccatagcaaccaggacaatgccagtggtcgg
aggagtgttgtcaccgcagcaactgccggctccgaagcaggtgccagcagtgtccctgct
ttcttttcagaggacgactctcagtccaacgactcgagcgactcggacagcagcagcagc
cagagcgacgacgtggaccaggagaccttccttttggatgagcccttggagaggaccacc
accgcctcgcacgtcaacagtgctgcccaggcgccacgctccatgcagtgggctgtacgc
aacacccccagccagagagccacgggcagcgccccctccagctcctccacccccgctgca
gcgagctccaccggtctgatctacatcgacccgtccaacctgcggcgcagcagtgccatc
agcactagcgcggccgctgcggctgcagctctggaggcctccaactcgtccagctacctg
acgtcagcctccagcttagcccgggcctacagcatcgtcatcagacagatctctgaccta
atgagcctcatccccaagtacaaccacctggtctattcccagtaccctgctgcagtcaaa
ctcacctaccaggacgctgtcaacctgcagaactttgttgaggacaagctgatccctacg
tggaactggatggtgtccatcatggactctacagaggctcagctgcgttacggctcggcc
ctgtcctcagcaggcgaccccggacacccatcccaccccctccacgcctcgcagcactcc
gcccgcagggagcgcatgacagcccgcgaggaagccagcctccgcaccttggagggacgc
aggtctgggcgtgctgccactctgctgacagtgcgtcaggggatgatgtcagcacgggga
gacttcctgaactacgccctgtctctgatgcgttcccataatgacgagcactctgacgtt
ctgcctgtgctggatgtgtgttctctcaaacacgtggcctacgtcttccaggccctcatc
tactggatcaaagccatgaaccagcagacaactctggacacaacacagatggaccgcaag
aggagccgagagattctggaactgggactggacaatgaagactctgaacatgagaatgat
gaggacaccaatcaaagttgttttctggtattggaaggcagacaagccagaagaaaggca
gttaggcagaaacgaggcaaaaagaagagggcagctcccaaaggttccacgctccaggat
aaggaggatgacgcggtccctgctgagatgggacagaaccacccgttcttccggcgctct
gactccatgaccttcttgggctgtatcccccccaaccccttcgaggtccccctggctgag
gccatccccctggcagaccagcctcacctcttgcagcccaatgcaaggaaggaggatctg
tttggccgtcctagtcaaggcctgtactcgtcctcgtacacagcaagcaaaggcctggcc
gaggccaccctggaccgcagctgcatggaggttaacatgggctcctctcagatcctaccc
actaagatgtcctactcagcgaacttgaagaacgtgatgagtatggagactagtcagcgt
ggccgagaggaccagcccatggaccaggagctagtggctccaaagccaggcccctcaccc
cacgacctagctgcccagctgaagagcagcctcctggctgaaataggcctcactgagagt
gatggccccccgctcccttcctttagaccccactgtagtttcatggggatggtgatctcc
catgacatgctgctgggccgctggcgtctgtctctggagctgttcgggcgcgtcttcatg
gaggatgttggagcagagcctggatcgattctgaccgagctggggggttttgaggtgaag
gagtcgaagttccgtcgggagatggagaaactccgtaacctccagtcccgtgacctggcc
ctggaggtggaccgtgaccgtgaccagctgatccagcagaccatgaggcagctcaacacc
cactttggacggcgctgcaccaccacacccatggctgtgcaccgcgtcaaggtcaccttc
aaggacgagccgggcgagggtagtggcgtggcccgtagcttctacacggccatcgccctg
gccttcctgtccaatgacaagctgcccaacctggactgtgtgcagagcgtcagcaagggc
atgcaggccagcagtacgtgtcatcacgattacaactcaagtatgacattgaatctgatg
cagcggctgaggaacagagaccgggagagggagcggaggagtggagggctccgagccggc
tctaggagagaccgagacagggactcgaggagacagctgtccattgacacccggcccttc
aggccagcctcggagggaaaccccagtgatgaacctgaccccctgcctgcccacagacag
gccctgggagagaggctgtacccccgcgtccacgctatgcagccggcgtttgccagtaag
atcactgggatgctgctggagctctccccagcccagctgctcttgctcctggccagtgag
gactctctcagggccagggtggaggaagcaatggagctgctcattgcacatggaagggaa
aatggtgctgacagcatactggacctgggtctcctggaggctcctgagaaagcacagcag
caggagaaccgtaagcgtcatggctccacccgcagtgtggtggacatggagctggacgac
cctgaagatggagatgacaacgctcccctgttctaccagcccgggaagagaggcttctac
tctccccggcctggcaagaacacagaggccaggctcaactgcttcaggaacatcggcaga
atactagggctgtgtctgctgcagaatgagctctgtccaattactttgaacagacatgtc
atcaaggtgctgctcggcagaaaggtgaactggcatgactttgccttctttgacccggta
atgtacgagagcctgcggcagttgatccgtcactctcaggctggagaggcggatgctgtg
tttgcagccatggacctggcctttgccatagacctgtgtaaggaggaaggggctggacag
gtggagctgctgtcaggtggggtcaacatgcctgtgactcctctcaacgtttacgaatat
gtgagaaagtacgctgaacacaggatgctggtggttgccgagcaacctcttcatgcaatg
aggaagggtctgttggatgtccttcctaagaacgccctggaggacttgacagctgaggac
ttcagactgctggtcaatggctgtggagaggtcaacgtgcagatgctcatcagcttcact
tccttcaatgatgaatctggtacaaagaccttggcccgtattcacaaagaatctcagagg
gaaaatgctgataagttgttgcagttcaaacgctggttttggtccattgtggagaagatg
agcatgactgagaggcaagatctggtgtacttctggacctccagtccatctctgccagcc
agtgaggaaggcttccagcccatgccctccatcaccatcaggcctccggatgaccagcac
ctgcccacggccaacacctgcatctcgcgtctctacgtgccactctactcctccaaacag
attctaaaacagaaactcttactagccattaagaccaagaactttggttttgtgtag
DBGET
integrated database retrieval system
