Oncorhynchus gorbuscha (pink salmon): 123997956
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Entry
123997956 CDS
T07892
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123997956 (ascc3)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123997956 (ascc3)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
123997956 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
123997956
NCBI-ProteinID:
XP_046158664
LinkDB
All DBs
Position
LG15:complement(72525013..72711763)
Genome browser
AA seq
2209 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQEDFTEEVYDLKTKRLKRQELFSREGLTWQKIVQFFTQHLEK
AEQQAAAQELKSILQAAKQIVGTEHGQDTIESAAVFLFETFHNKDHVGHEETRAIKQMFG
PFPSSAADASCAAVSRAVAPLGESQVEEFVRSQSSCRAPQRGSAFGRNITFSYDCYTLDP
QEALPWAGGPEDENPGGGLDFHSFLNNHQGRRSNGGEADGGRLSPGGAQSSGNGTILRGE
VEKYLNGGNMISSSPEELCTSLFEMLASTKSDDELQNELFELLGPEGFEMISVLLQRRSS
IVDSLLSIPADRINYPPDGSRGGEGGSKPTYGCQVTIQSGKEKEMMKMHRREEKRERKRG
ERRWDDTESSSDLYFDPKEMRAQREQALLTARRSPVLSRERVYERIRYPNVYDCYAEATK
TSAFVGGAKLMLPEGIKRENNKMYEEVEIPPSDPMSIGFEEKPIYISELDEIGQLVFKGM
QRLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKI
VYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTR
KSVGDVALSQIVKLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPN
YLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKSTNKIQQLHDMEEVCYEKVLEQIR
NGHQVMVFVHARNATVRTAMGLIEMAKNRGESSFFQPDHGPDYGQCEKSIQRSRNKQMKE
MFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVNLPAHAVIIKGTQIYDA
KRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYLTLLTQQNPIESQFLET
MADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGINHKAYQMDPGLELYRKEL
VVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTMETFNELFNSQKTEADILS
IVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGKINILLQTYIGRGEVDSF
SLISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGFAHPLRQFSIL
PHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGLKVKQCVHQIPSILMEATIQPITR
TVLRVRLQITPDFQWHDQCHGSVGEPWWLWVEDPINDHIYHSEYLLLQKKQVVSGEPQQV
VFTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPITAL
GNLEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNQYPTS
KVVYIAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAAADLIVTTPEKWDG
VSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTNKTVRVVGLSTAL
ANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRSHS
PAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDETQMTDIIATVRESNLKLTLA
FGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDGKTR
RYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSD
HLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDISHETINKYLSNLVERSLR
DLECSYCMEIGEDDCTIEALTYGRISSYYYLKHQTVRMFKERLRAELPIQDILSVLTDAE
EYAELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYGTDT
KTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWLNDSSILTLPTIEQQHLY
LFSRWSSKGGKGGARGFHGPIEGLPELIATCEGRENTFAAIVGEELQPHQISQAWSFLSH
LPVVEVRLSVKGWWEGCGEQTERPLPAAGGKLRDDRSWLDVHADQEYVLQVSLQRINTGQ
QRRKQDTKAQAPRFPKNKDEGWFLVLGEVERRELLAVKRIGYCRHRSTISLAFYTPVKTG
KCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAMGGMSVK
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccccggctcaccggcgccctgcgctccttctctactgtcagcaagcaggaa
gacttcactgaagaagtatatgatctgaagaccaagcgtttgaagaggcaggagctgttt
tccagagagggcctgacatggcagaagatagtccagttcttcactcagcacctggagaag
gcagagcagcaggctgcagcacaggagctgaagagcatcctacaggctgccaagcagata
gtggggacagagcatggccaggacaccattgagagtgctgctgtcttcctgtttgagacg
ttccacaacaaggaccatgtgggtcacgaggagactagggccatcaagcagatgtttggg
cccttcccctcctcggcagccgacgcctcctgtgctgctgtgtcccgggctgtggcccct
ctgggagagtcccaggtggaggagtttgttcgttcccagagctcctgtcgcgcccctcag
cgcggctcggccttcggacgcaacatcaccttctcctatgactgttacaccctggacccc
caggaggccctgccctgggcggggggccctgaggacgagaaccctggtggaggcctggac
ttccacagcttcctcaacaaccaccaaggtcgcaggagtaatgggggagaggcagatgga
ggcaggctaagcccgggaggggctcagagctctgggaatgggaccatcctgagaggggag
gtggagaagtacctgaacggaggcaacatgatctcctccagccctgaggaactgtgcacc
tccctgtttgagatgctggcctccaccaagagtgacgacgagctgcagaatgagctgttt
gaactgctgggcccagagggatttgagatgatctctgttctcctccagagaaggtcttcc
atcgtggattctctcctttccatccctgcagacaggatcaactacccaccagatggtagc
cgtggaggagaggggggcagcaagcccacgtacggctgtcaggtgaccatccagtcgggg
aaggagaaagagatgatgaagatgcaccggagggaggagaagagggagaggaagaggggg
gagagacgttgggatgacaccgaatcctcttccgacctctactttgaccccaaggagatg
agagctcagagagagcaggccctgctgacagcacgccggtctccagtgctgagcagagag
cgggtgtacgaacgcatccgctaccccaacgtctatgactgctacgccgaggccaccaag
acctccgccttcgtagggggagccaagctgatgttaccagaggggataaagagagagaat
aataagatgtatgaagaggtggagattcctcctagtgatcccatgtccatcggctttgag
gagaaacccatctacatctctgaattggacgagattggtcagttggtgtttaaggggatg
cagcgtctgaacaggatccagtccatagtgtttgagacagcctacaacaccaatgagaac
ctgctcatctgtgcccccaccggggccggcaagaccaacatcgccatgctgacagtcctc
catgagatcagacagcacctccaacctggaggggtcatcaagaaggatgagttcaagata
gtgtatgtagctcctatgaaggccctggcagcagagatgacgaactacttcagtaagcgg
ttggagccactgggcattgctgtcaaagagctcactggagacatgcagctaaccaaaggg
gagatcctgcgtacacagatgctggtgaccacccctgagaagtgggacgtggtgaccagg
aagagcgttggggacgtggccctgtcccagattgtaaagctcctcatcctggacgaggtg
catctgctacacgaggacagaggaccagttctggagagcctggtggccaggacactacga
caggtggagtcaacccagagtatgatccgtatcctgggtctgtcggccacgctgcccaac
tacctggacgtagcctccttcctccacgtcaacccctacatcggactcttctacttcgac
agccgcttcagacccgtgcccctcggacagagcttcgtcggcatcaagtccaccaacaag
atccagcagcttcatgatatggaggaggtttgctatgagaaggttctggagcagatcaga
aatggacatcaggtgatggtgtttgtccacgctcgtaatgccacggtgaggacagccatg
gggctgatcgagatggctaagaaccggggagaatcttccttcttccagccagaccatgga
cctgactacggccagtgtgagaaatcaatccagcgttccaggaacaagcagatgaaggag
atgttcccagatggttttgggatccaccacgctgggatgctgcgtgctgaccgtagcctg
atggagagcatgttctccaggggttacctcaaggttctgtgctgtactgccacactggcc
tggggagtcaacctgcctgcacacgctgtcatcatcaagggcacccaaatctacgatgct
aagcgtggtaccctggtggacctgggcatcctggatgtgatgcagatcttcgggcgtgcc
gggcggcctcagtttgacaagtacggcgagggcaccatcatcacggcacatgacaagctg
agccactacctcaccctgctcacgcagcagaaccccatagagagccagttcctagagacc
atggctgacaacctcaacgctgaggtatcactagggactgtgactaacgtggaggaagca
gtgaggtggctgagttacacctacctgtacatccgcatgagagccaaccctctggcctac
gggatcaaccacaaggcctaccagatggacccaggtctggagctgtatcgtaaggaactg
gtggtgatggcagccaggaagctggacaaggccaggatgatccgcttcgaggagaggaca
ggatacttcgcctccactgacctgggcagaaccgccagtcacttctatatcaaatacaac
accatggagacgttcaacgagctgttcaactcccagaagacagaggctgacatcctcagc
atcgtctccaaggccgaggagtttgaacaggtcaaggtgcgtgatgaggagatggaggaa
ctagagcagatgctgtgtaactactgtgagctgcctgctgcaggcggagtggagaacgga
tacggcaagatcaacatcctactgcagacctacatcggccggggagaggtggacagcttc
tccctcatctcagacctgtcctacgtagcacagaacgcagctcgtatcgtcagggctctg
tttgagattgctctgaggaagcgctggcctgccatgacctaccgcctgctcaacctgtgt
aaagtgatagacaagcgtctgtggggcttcgctcatcccctgagacagttctccatcctg
cctcacaacgtgctggcccgtctggaggagaagaaactcaccgtggacaaactgaaagat
atgcagaaggacgagataggtcacatgcttcaccacgtgaacatcgggttgaaggtgaag
cagtgtgtccaccagatcccttccatactgatggaggccaccatccaaccaatcacacgc
accgtgctcagggtccgcctccagatcacccccgacttccagtggcacgaccagtgtcat
ggttcagtgggagagccctggtggctgtgggtggaggaccccatcaacgatcatatctac
cattcagagtacctgctcctacagaagaaacaggtggtgagtggggagccccaacaggtg
gtattcaccatccctatctttgagcccatgccctcccagtactacatcagagctgtgtca
gaccgctggctgggctcagaggctgtctgcatcatcaacttccaacacctcatcctgcct
gaaagacatcccccacatactgagctgctggacctgcagccgttgcccatcaccgccctg
gggaacctggagtatgagagtctgtacaagttcacccacttcaatcccatccagacacag
atcttccacaccctctaccacacagacaccaacgtcctgctaggggcgccaacgggctcc
ggtaaaaccatcgctgccgagttggccatgttccgagtcttcaaccagtaccctacctcc
aaggtggtgtacattgcccctctgaaagctctggtcagggagaggattgaggactggaag
atcaggatagaggaaaaactggggaagaaggtcgtggagctgacaggtgatgtgactcca
gacatgcgggccatcgccgcggccgacctgatcgtgaccacaccggagaagtgggacggc
gtgagtcgctcctggcagaaccgcagctacgtccagaaagtagccattctcatcatcgac
gagatccacctgctaggggaggacagaggtcctgtgctggaggtcatagtgtccaggacc
aacttcatctcctcccacaccaacaagactgtccgcgtggtgggcctgtccacggccctg
gccaacgcacgagacctcgccgactggctagggattggacaggtgggtttgtttaacttc
cgtccctctgtgcgtcccgtcccattggaggttcacatccaaggcttcccaggacagcac
tactgcccccgcatggccagcatgaacaagcctgtgttccaagcgattcgcagtcactct
ccagccaagcctgttctgatctttgtgtcgtcgcggcgacagactcgtctgacggctcta
gacctgatagccttcctggccaccgaggacgaccctaaacagtggctgcaccaggacgag
actcagatgacagacatcatcgccacggtgagggagtccaacctgaagctgacgttggcg
tttggtatcggcatgcaccacgctggactacacgagcgagacaggaagactgtggaggaa
ctgtttgtcaactgcaagatccagatactgatagctaccagtactctggcctggggagtc
aacttccctgcccatctggtcattgtcaaaggtactgagtactacgatgggaagaccaga
cgctacgtggactaccccatcacagacgtgctgcagatgatgggccgtgcaggccgccct
cagtatgacgaccagggcaaagctgtgatcctggtccacgacatcaagaaagacttttac
aagaagttcctctacgaacccttccctgttgaatccagtctcctgggtgtcctgtcagac
catctgaatgctgagatcgctgcagggaccatcacctctaaacaggatgctatggactat
atcacctggacgtacttcttccgcaggctggtcatgaaccccagttactacagcctggat
gacatcagccacgagaccatcaacaagtacctgtccaacctggtggagcggagtctccga
gacctggagtgttcctactgtatggagataggagaggatgattgcaccattgaggccctg
acgtacggtcgtatctcctcctactactacctgaagcaccagacagtcaggatgttcaag
gagaggctgagggctgagctgcccatccaggacatcctctctgtcctcacggatgctgag
gagtacgcggagctgcccgtcaggcacaacgaggaccagctgaacagtgagctggctcag
cgtctccccctgcaggtcaacccccacagctacgacagcgcccacaccaagacccacctg
ctgctgcaggcccatttcagccgcgcccagctgccctgctccgactacggcaccgacacc
aagaccgtgctggacaacgccatacgcatctgtcaggccatgctggatgtagcagccaac
gagggctggctggtgactgctctcagcatctgtaacctggtacagatgatcgttcagggc
aggtggctcaatgactcctctatactgaccctacctaccatagagcagcagcacctctac
ctgttcagcaggtggagctccaagggagggaagggcggggccaggggcttccacggacca
atagaagggctccctgagctgattgccacctgcgaggggcgggagaacaccttcgctgcc
atcgtgggagaggagcttcagccccatcagatctcccaggcctggtcattcctcagccat
ctgccagtggtggaggtgcgtctgagtgtgaagggttggtgggaggggtgtggggagcag
acagagcgccccctccctgcggccggggggaagctcagggatgacagaagctggctagat
gtccacgctgaccaggagtacgtcctgcaggtctcactgcagcgcatcaacaccggccag
cagaggaggaagcaggacactaaggcccaggcccccaggttccccaagaataaggatgag
ggctggtttctggttctaggagaggtggagcgcagagagctactggccgtcaaacgcatc
ggatactgccgacaccgcagcaccatttccctggccttctacacccccgtgaagaccgga
aagtgtatctacacactatacttgatgagtgacagttacctgggtctggaccagcagtat
gacctccacctcaacgtgacccctgcctgcatcgctgcccaggtcaacagtgaagtcact
gaggccatgggaggcatgtccgtcaagtga
DBGET
integrated database retrieval system
