Oncorhynchus gorbuscha (pink salmon): 123998085
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Entry
123998085 CDS
T07892
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123998085
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
123998085
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123998085
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
123998085
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
123998085
NCBI-ProteinID:
XP_046158919
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Position
LG15:complement(62439521..62457238)
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AA seq
448 aa
AA seq
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MFDYMDFLAVGPGETLDFYTASPCMLQDPSVTACFTGLTETDWQIHRIAQSAVETQSSSS
EDLFASPLSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDS
NCIINKITRNRCQYCRLQRCFAAGMSKECVAHKGNHTRAVRNDRSKKKEKETPKMTIIET
YELSAELGGVVENICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCII
KVVEFAKRVPGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQI
HNAGFGPLTDQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLE
ALKIYSRKRRPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEM
ENLQKQSEEEQRADKNITPTHTPCPHST
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggagaaacgctggacttctatact
gcaagtccttgtatgctccaggatccatctgtaaccgcatgcttcactggactaacagaa
acggattggcaaattcatcggatcgcgcaatcagctgtggaaacccagagctccagctca
gaggacctgttcgccagtcctctctcacctccgccccctcctcgcacctacaaaccctgc
ttcgtgtgccaagacaagtcttcaggctaccactatggcgtcagtgcttgtgagggctgt
aagggtttcttccgtagaagtgtccagaagaacatggtttacacgtgccaccgggacagt
aactgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgc
ttcgccgcgggcatgtccaaggagtgtgttgcccacaagggaaatcacaccagagctgtc
aggaatgaccggagcaagaagaaggagaaggagactcccaagatgaccatcatcgagaca
tatgagctgtcagcggaactgggcggtgtcgtggagaatatctgtagggctcatagagag
acattcccttccctctgccagttgggcaaatacactacaaactcaagctcagacactagg
atccagttggacctggggctgtgggataagttcagtgagctggccaccaaatgtatcatc
aaggttgtggagtttgccaaacgggttcctggcttcaccggcctgactataactgaccag
atcaccctcctcaaagcggcctgtctggacattctgattctgcggatctgtacgaggtac
acacctgaccaggacactatgaccttctcagacgggctgaccttgacccgtacacagatc
cacaacgctggctttggcccgctcacagaccaggtgttcaccttcgccggccagctgctg
cccttggagatggatgacacagaaagtggcctactcagcgccatctgtctggtgtctgga
gaccgccaggacctggaggagccgtctaaggtggaggtcctgcaagagcccttactggag
gccttgaagatctactcccgtaaacgccggcccagcatgccccttatgttccccaaggtc
ctcatgaagataaccgacctgcgcagcatcagcgccaaaggagctgagcgagtggtgacg
ttgaagatggagatcccaggttccatgcctcctcttatccaggagatgctggaggagatg
gagaacctgcagaagcagtcagaggaggagcagagagcagacaagaacatcacacccaca
cacacaccatgtccacacagtacatag
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