Oncorhynchus gorbuscha (pink salmon): 123998113
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Entry
123998113 CDS
T07892
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
123998113
Enzymes [BR:
ogo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
123998113
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123998113
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
123998113
NCBI-ProteinID:
XP_046158991
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All DBs
Position
LG15:complement(77950476..77957242)
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AA seq
750 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KKLLIEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDDDDDDDDKGKSGDEDMDENDTVQANLDEMDKFILPGAEEIAKEGVLLVDLQTIHQRIK
DNVDVLSHFATKREEGKGRTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEAN
EIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAG
HYMLQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKS
VVGNIHRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDI
QRLAHLQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGL
DFGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEET
KPSEAVEVTADSSDEDGPSKAGSKNKSKKQKPVPGKPAMSQKATANGKPAKSIGKKTTNP
STLKKSEKPTGQKKAKIAKMDGGTVKVDGELKKSNTVKTEGETTKELKEGSRFEKKGDKQ
RKSPMQSKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcagatccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaatagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataacgaggacgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
aaaaaactgctaattgaaggagacggtgacgatgatgacctggttgatgactacggtgca
ttggaggacagcagtgaaggagagggagaagtagacggtgatggagaggagctgctcccc
atcgagcgagctgccaggaagcagaagaagctgcaggaagccatgggccaggagagtgat
gacgacgacgacgatgatgatgatgataaggggaagagtggagatgaagacatggatgaa
aatgacactgtacaggctaatttagatgagatggacaaattcattctacctggagcagag
gaaatagcaaaagagggtgttttgcttgtagacctgcagaccatccaccagagaataaag
gacaatgtggacgttctctctcactttgctaccaagagggaggaggggaaagggagaaca
gagtacctctctctcctcaaaaaggatctttccacttactacagctacaacaatttcctc
atagacaaactgctggatatcttcccagtgtcagagctgattgatttcctggaggccaat
gaaattcagcgacctgtcaccattcggaccaatacactgaagacaaggaggagggacttg
gctcaggccctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaagtg
ggcctggtcatctttgactcctcagtacccatcggtgcgaccccagagtacctagctggt
cactacatgctgcagggagcctccagcttcctgcctgtcatggctctttctccccaggag
ggggagactgtgctcgacatgagctcagctcccggggggaagaccacctatatggcccag
ttgatgaggaacacaggagtgattgtggccaatgatgccagtgctgacagactgaagagt
gtggtgggcaacatccaccgtctgggagtcaccaactcaatgatctgtaactacgacggg
aggcagttccccaaggtaatgggggggtttgacagagtgctgcttgatgctccctgctca
ggcacaggagtaatctccaaagaccctgctgtgaagaccagtaaagacgagtctgacatc
caacggttggcccacctgcagaaggagctcatcctggcggccatcgactcggtcaacgct
gagtctccctctggaggctatctggtgtactgcacatgctctatcatggtggaggagaac
gagtgggtagtggactacgctctcaagaaaagaaacgtcaaacttgtccagactggactg
gactttggcaaagaaggcttcaccagattcaaagagagacgattccatccctctctgaaa
ctctcacgccggttctatcctcattcccacaacatggacggtttctttgtggccaagctg
aaaaagttctccaacacggtcccaaccacagcagttgacaaagacggagaagaggaaacc
aagccatctgaggcagtagaggttacagctgattcctctgatgaggacgggccatctaaa
gcagggtctaagaacaagtccaagaagcagaagccagtccctggcaagccagctatgtca
cagaaggccaccgccaacgggaagccagccaaaagcatcggcaagaaaacaacaaaccca
agcaccttgaaaaagagtgagaaaccaactgggcagaaaaaggcaaagatcgctaagatg
gatggtgggactgtgaaagttgatggagagctcaagaagtcaaacacagtcaaaacagaa
ggggagacgaccaaagaattaaaggaagggagcaggtttgagaaaaagggcgataaacag
aggaaatcccccatgcagagcaagaagagaatggggaagaacaaattcaataagttgaag
aagctgctgaaaaaagaagaggttggacaatga
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