Oncorhynchus gorbuscha (pink salmon): 123998187
Help
Entry
123998187 CDS
T07892
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123998187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123998187
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123998187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
123998187
NCBI-ProteinID:
XP_046159153
LinkDB
All DBs
Position
LG15:80645130..80655742
Genome browser
AA seq
711 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRNSRGNKGAGERNRKRDLKDVFGDEVEVGARRDVPETGDGVPVKRKR
VPRFEEVEEPEVLPAPTTESPGMLTKIQIKQMMEAATRQIEERKKQLSFVPVSSQQRLPL
PTPQPDPPFASHLLPAPSAPSSGSAQSIAPSQAATFMNDAIEKARKAAELQARIQSQLAM
KPGILGAIGNTGGPHNLVALANLHAMGIAPPKVAEARESNKPAPLILDDMGRTVDASGNE
VELTHRMPTLKANIRAVKREQFRQQLKEKPGEDLESTIYFDGRVNIAPAQRAKKGFKFHE
QGRFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLALFAPKKMLGDGQVPIIEWWD
SYILPSNIDLSTETNFVAMELFGVTNLVEHPAQISPPVDTDKPGVTLGVYLTKKEQKKLR
RQTRREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEEANAARKLTTEQRKEKKVKKLKEDLSLGVHISVYRIRNLHNPAKKFKVEANANQLYL
TGTVVLHRDVNMVVVEGGPKAQKKFKRLMLSRIKWEEHNSKRDDPDADDETKKNNRCSLV
WEGTAKERNYGEMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLESTDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtggaggagctacggccctgggtggaacggaccgtgaag
aaggtgctggggttctctgagcctactgtcgttactgcggccctgcactgtgtaggcaag
ggcctggacaagagaaagaccacagaccagctgcgtccattcctggatgagtctgccggt
gggttcgtggagagactatttgaggccctggaggagagccgtaattcccgtgggaacaag
ggtgctggggagaggaaccgcaagagagacctgaaggatgtgtttggtgatgaggtggag
gtgggtgcgaggcgggacgtccccgagacaggagatggtgtgccggtgaagaggaaacgt
gtcccccgcttcgaggaggtggaggaaccagaggtcctacctgcacccaccactgagagc
cctggcatgctcactaagatacagatcaaacagatgatggaggctgccaccagacagata
gaggagaggaagaaacagctgagcttcgtcccagtgtcttcccagcagaggctgcccctg
cccactccccagccagacccccccttcgcctctcatcttctccccgctccctctgccccc
tcctcgggctcggcccagtccatcgctccctcccaggcagctactttcatgaacgatgcc
atcgagaaggctaggaaggctgcagaactgcaggcccgcatccagtcgcagttagccatg
aagcctggtatactgggagccattgggaacactggaggacctcataacctagtggcgctg
gctaacctacacgccatggggatagcaccaccgaaggtggcggaggcccgtgagtcaaac
aagccggcccctctgattctggatgatatgggtcggactgtggatgccagcggcaacgag
gtggagctaacacaccgcatgcccaccctcaaagctaatatccgtgcggtgaagagggag
cagttccgtcagcagttgaaggagaagcctggcgaggacctggagtccactatctacttt
gacgggcgggttaacatagcacccgcccagcgagccaagaagggcttcaagttccatgag
cagggacgctttgagaagatcgcccagaggatcagaactaaggcccagttggagaagctg
cagacagagatcgcccaggcagccaagaagactgggatccaggcctccaccaagctggcc
ctctttgcccccaagaagatgctgggggatgggcaggtgcccatcattgagtggtgggac
tcgtacatcctcccctccaacattgacctatccacagagaccaattttgtggcgatggag
ttgtttggcgtcacaaacctggtggagcaccctgctcagatcagccccccagtggacaca
gacaagccaggagtgactctgggagtgtatctgactaagaaggaacagaagaagctgagg
agacagactcgcagggagggacagaaagagcttcaggagaaggtccgactggggctcatg
ccccccccagaacctaaagtgcgcatctctaacctgatgagagtgctgggtacggaggca
gtacaggatcccactaaggtagaggcccacgtcagagcacagatggccaagagacagaag
gcccatgaggaggccaatgcagcccggaagctcacaaccgagcagagaaaagagaagaag
gtgaagaagctgaaagaggacctgagtcttggagttcacatctcagtctataggatccgt
aatctccacaacccggctaagaagtttaaggtggaagctaacgccaaccagctgtacctg
acgggcaccgtggtgctacaccgagacgtcaacatggtggtggtggagggaggtcccaaa
gcccagaagaagttcaagaggctcatgttgagcagaatcaaatgggaagaacacaactcc
aagagagatgatccagatgcagacgatgagaccaagaagaacaacagatgcagcctggtc
tgggagggcacggctaaggagcgtaactacggggagatgaagtttaagcagtgtcctaca
gagaacatggctagagaacactttaagaagcacggaacagaacactactgggacctggct
ctgagccagagtgtgctggagagcactgatgactga
DBGET
integrated database retrieval system
