Oncorhynchus gorbuscha (pink salmon): 123998193
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Entry
123998193 CDS
T07892
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123998193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123998193
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123998193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS
PAS_3
PAS_11
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
123998193
NCBI-ProteinID:
XP_046159164
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All DBs
Position
LG15:81002676..81027550
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AA seq
833 aa
AA seq
DB search
MLFNPDMDSSNPDIPDDSLGLGAGGAQASSSAVVPKGSNKRRAAPDFDDDDDDGSKLFRS
SLSLTRCDDDGGGGDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLT
ILRMAVSHMKSLRGSGNTAADGTYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVS
DSLTPVLNQSQSDWLGSSLYDQLHPDDGDKLREQLSTAESNNTGRMLDLKTGTVKKEGQQ
SSVRMCMGARRSFICRMRCGSCPVEPMSMNRLNFLRSRNRNGLGPPKDGEPQYVVVHCTG
YIKSWPPTGVNLTDEEADNIQGSRYCLVAIGRLQVTSCPSDTDINSISVPVEFISRHNCQ
GLFTFVDHRCMATVGYQPQELLGKNILELAHPEDQELLRDSFQQVVKLKGQVLSVMFRFL
SKTRDWLWIRTSSFTFQNPFSEEIEYIICTNANVKTSTQDTLTPLSSSGVSLPPSLGESS
PNFPPVPHSPGQVAARQLQQQQQAELGGGGRDGLYEAGQVTLPQMPVQAVTAAGTDHSKT
RDKAEMHPSMYPNPDQAKFLPSTSAPGVPIYPQDNNYTTANRSNETYSRSVGMAQMVQPS
HSAGQVLAQMVQPSHSAGQVLAQMVQPSHSAGQGMAQMAQPSHSAGQVLAQMVQPSHSAG
QVLAQMSRQNGAPPSNSSPLQGGAVVSWPGPAAGARPPFNNQQVVPQAGKALSPQFAMGS
FVGGSSSSFGAMPTTAAPTPTMGANYPNINPRASLNTNGYDGLGSGQQFSSRAAEAVWPQ
WQGQQQAQNRAEQHLHTQNNQPDIFPDVLAMLDQPANFNNDDFEIPIYPSFNE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgttattcaacccggacatggactcttctaacccagacataccagatgactctctgggt
ttgggagccggtggggcccaggcaagcagcagtgctgttgtgccaaaagggtccaataag
agacgagctgcgccagactttgatgatgatgatgatgatggaagcaagctcttcagatct
tctctgtctttgaccaggtgtgatgacgatggaggaggaggagacaaagagcgatttgcc
agggagaaccacagtgagatagagcggcggcggaggaacaagatgactgcttacatcaca
gagctgtcggacatggttcccacctgcagcgcgttggcacggaaaccagataagctgacc
atcctgcgcatggccgtgtcccacatgaagtctctgagagggagcggcaacactgcagca
gacgggacatacaaaccatccttcctcaccgaccaggagctgaagcacctgatcctggaa
gctgctgatggcttcctgtttgtggtgtcgtgtgagagtgggcgggtcgtctacgtgtca
gactccctgacccctgttcttaaccaatcacagtccgactggctaggctcctcactctac
gaccagctccacccggacgacggagacaaactacgagagcagctctctactgcagagagt
aacaatacagggaggatgttagacctgaagacaggaacagttaagaaggagggacagcag
tcctccgtcaggatgtgtatgggagccagacgatccttcatatgtaggatgagatgtggt
tcgtgtccagtggagcccatgtctatgaacagattgaatttcctgcggagcaggaacagg
aatggtctgggcccacccaaggatggagagcctcagtatgtggtggtccactgcactgga
tacatcaagtcctggccccccacaggggtgaatctaacagatgaggaagcagacaatatt
caggggagtcgctactgtctagtcgccatcggtagacttcaggtgacctcttgcccgagc
gacacagacataaacagcatcagcgttccggtggagttcatctctcgtcacaactgccag
ggcctctttacattcgtagaccaccgctgcatggccacagtgggctaccagcctcaggaa
ctgctgggtaagaacatcttggagctggcccaccctgaggaccaggagctgctgagagac
agcttccagcaggtggtcaagctgaagggtcaggtgctgtccgtcatgttccgcttcctg
tccaagaccagagactggctctggatcaggaccagctccttcaccttccagaaccccttc
tctgaggagatagagtacatcatctgtaccaacgccaacgtcaaaacctcgactcaggac
accctcacccccctctcgtcctcaggggtgtctttgcccccctcgctgggggagagcagt
cctaacttcccccctgtgccccacagcccagggcaggtggctgccagacagttgcagcag
cagcagcaagcagagttggggggaggagggagagatggtctgtacgaggcagggcaggtt
acacttccacagatgcctgtccaggccgtgaccgcagctggaactgaccacagtaagacc
agggacaaggcagagatgcacccctccatgtaccccaacccagaccaggccaagttcctg
ccctccacctctgcccccggagtacccatctaccctcaggacaacaactacaccactgcc
aaccgctccaacgaaacatacagcaggtcagtagggatggctcagatggtgcagccatcc
cactccgcaggccaggtgctggctcagatggtgcagccatcccactccgcaggccaggtg
ctggctcagatggtgcagccatcccactccgcaggccaggggatggctcagatggcgcag
ccatcccactccgcaggccaggtgctggctcagatggtgcagccttcccactccgcaggc
caggtgctggctcagatgtcccgtcagaacggggcacccccctccaacagcagcccccta
cagggaggggcagtggtgagctggccggggccagcagcaggggctagaccccccttcaac
aaccagcaggtggtgccccaggcagggaaggccctgtctccccagtttgccatggggagt
tttgttgggggctcttcctcctcatttggggcgatgcccaccactgccgctccgaccccc
accatgggggctaactacccaaatatcaacccccgcgccagcctcaataccaacggatac
gatggcttggggtcggggcagcagttctcctccagggcagcggaggcagtgtggccccag
tggcagggccagcagcaggctcagaacagggcagagcagcacctccacacacagaacaac
cagcctgacatcttccctgatgttctcgccatgctggaccagccggccaacttcaacaac
gatgactttgagattcccatctacccctctttcaacgagtga
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