Oncorhynchus gorbuscha (pink salmon): 123998197
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Entry
123998197 CDS
T07892
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123998197 (rnf115a)
04121 Ubiquitin system [BR:
ogo04121
]
123998197 (rnf115a)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123998197 (rnf115a)
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123998197 (rnf115a)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123998197 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-Nse
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
123998197
NCBI-ProteinID:
XP_046159176
LinkDB
All DBs
Position
LG15:81243336..81255901
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AA seq
347 aa
AA seq
DB search
MKGCWRTTSLVCRRTDVTVCAILGKMAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCES
GFIEEVTEDSSLLEGGTNGTDDTATQFAEQLWHLLFVERPFTVDGDSPDSEPRIPGGGVG
VGSGGLGLGGLGGLGGGPIGGSVPAGLGGPLVGPLGGGEHWGPGRPPRLHSQRRYRSRGS
SRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLL
GQFENTGPPPAEKEKISSIPTVNVSQDQADCSMECPVCKEDFAVGEPVRQLPCNHFFHSD
CIVPWLEMHDTCPVCRKGLNGEDSNTQNPPESPSLNTDPRTQERWSF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaagggatgttggcggaccacctctttggtatgcaggaggaccgacgtcactgtttgt
gctattctggggaagatggcggaagctgcggcggttcccccgcatcggttcttctgtcat
tgttgtaagggagaagtaagccccaagctcccggagtacatctgtcccaggtgtgagtct
ggctttatagaggaggtaacagaagattccagtctgctagagggtggcactaacgggaca
gatgacacagccacacagtttgcagagcagctgtggcacctgttgtttgtagagaggcct
ttcacagtggatggtgacagtccagactcagagccccggatccctggtggaggggttggg
gtaggatcgggggggttaggtctgggagggctaggaggcctgggaggaggtcctatcgga
gggtcagtccctgctgggctaggaggacccctggtgggtcctctgggagggggggaacac
tgggggcctggtcgcccccctcgcctgcacagtcagcggaggtaccgctccagagggagc
agcagacctgaccgctcacctgccgtagaggggatagtacaacagtttctggctggtcta
tttgccaactctggagttcctggctcacctcccctctcttggacggggatgctacactct
aacccaggggactatgcttggggacaggggggactggacgcagtcatcacacagttgtta
ggtcagtttgagaacacgggacctcctcctgcagagaaagagaagatctcctccatacct
acagtcaacgtgtctcaggatcaagcagactgcagtatggagtgtccggtgtgcaaggag
gactttgcagtgggagagcccgtcagacagctaccctgcaaccacttcttccactcagac
tgtatagtaccctggctggaaatgcatgatacgtgtcctgtgtgtaggaaggggttgaat
ggagaagacagcaacacccagaaccccccagaatccccctctctaaatacggacccccgc
acacaggagagatggtccttctga
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