Oncorhynchus gorbuscha (pink salmon): 123998216
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Entry
123998216 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: calsyntenin-3-like
KO
K22661
calsyntenin 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123998216
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Cadherin related
123998216
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
123998216
NCBI-ProteinID:
XP_046159203
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Position
LG15:complement(57321385..57360488)
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AA seq
960 aa
AA seq
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MDRMSFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPTGSSSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPSVPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAV
VPDSVAAAVSGDHFTLQLWMRRGGINTQPPTNQARGNRREEETIVCSTVKNGQSNDDSFS
HYSLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTF
DPALIHDNGVIPNPAPRQRLVIGACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGV
TVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAV
QQVTYRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGP
HLARPAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPL
GEELHPEREELLVDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSAR
FERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGH
TLPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGTRGGSKEDSGQWDD
SALTIIVNPMESYESRMGISADTEGEGEEDEEVVESPDNANDDQRIIIKKEGRDGNPRRY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagttttctctcctttctcctcctttgcttgacttcggttgccaatggc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggtatcgtcatggag
aatgacaacaccgttcttctcaacccaccactgttcgccctggataaagatgctccactg
cactatgcgggtgagatctgtggcttccgggtgcacaatgggcccacgggatccagttca
gtacagtttgaggcggtggttctggaccgctcgacaggggagggcctggtccgctctaaa
gagcccctggactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgt
ggagagggccccgatggagccaacagcaagaagtcccacaaggctacggtgcatgtacgt
gtgaatgacgtaaacgagttctccccagtgttcgtggagcgtcgctatgaggcctccgtc
ccagaaggccgtctgttcgaccgcatcgtgcgcgtcgaggccctcgacgcagactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccagtgttccctttgtcatc
gataacgatggtaacattaagaacaccgagccattggattcgaagcgccagcgtgtccac
accttctgggtgacagcgtttgactgtggcaagaaccgtgctcaggccgacgcccaggtc
gtcgtcacggtcaaaccgtcctgcaaacccggctggatcggttggtcgaagcgggtggag
tatacccccgggtcaggcagcattcccctgttccccagtttgcacctggagacctgtgaa
gagactgtgtggaacatccaggccaccgtagagctgcagactggccatattgggaagggc
tgtgacagggacagctactcagaccgatcagtgcgcagactctgtggtgctgtgagaggt
gaagtggatttactcccgcccccatccccagcagccaattggacctcagccttgcccacc
ctcccttcttctgattcgtccctggtgttctccttcaatggctccacccatgttgctgtg
gtacccgactccgttgccgcggccgtatccggagaccatttcaccctccagctgtggatg
cgaaggggtgggatcaacacccagcctccgactaatcaggccagaggaaaccgcagggag
gaggagactatcgtctgcagtaccgtcaagaatggtcagtcaaatgacgactccttctcc
cactactctctctccgttcacggctgccgtctctctcttttctactggcccgacgtctcc
gctgcgcggcccgtgaaattcctctggaaactggagcaggtgtgtgacagcgagtggcat
cacctgtccctcagtgtccagttcccctctgtgacactgtatgtggatggagtcaccttc
gaccccgccctcatccacgacaacggagtcatacccaaccctgccccacgacagcgactg
gtcattggcgcctgctgggagacagaagataaacagaaggacattcttaacaacaccatc
cctgaagggaaagacacagggaagtatgtgggtggttaccgtggcctgttgtcaggggtg
acggtgcgtccagggagtgtggagccccacagtgtggtggagtgtctgtatgcctgcaga
gaggggctggactttggggacctggagaccttgggctcaggcatgaaggtgcatgtgaac
ccaagtcagtctgtgctggttctggagggtgatgacattgagagcttcaacagggccgtg
caacaggtcacctacaggaactctctccgcttcgccacccctggagtcaggccactcaaa
ctgaccacctctctcaggtgtttcaatgaggagagttgtcttacgctcaggcagttggag
ggctacctggtggtccttcagcctgacgcccctcagatctccctgtctggggtcggcccc
cacctggcccgccccgcgcctgaattcgagggcccccgtggtgtacccctcttcccagag
ctgaggatcgtgtgctccctgtctcatgctgttaacacagccgctcagggcatggaagga
ggagctctgatgtcagacgccgtggcccacactctggacggctgtgaggtccagcccctg
ggggaggagctacacccagagagggaggagctcctggtggacatggatgccctgagagag
aggggtctggagataatcaacaccactgcttacatcgccatcacaggagcggagtccatc
tccgtgtatgaggatgtccttcggtccgtccgttaccggctggctaaaggctcggcccgc
tttgagaggcggttccgtctgtcctgctccgagatgaatggcagatacaccagtaacgag
ctcacactggaggtgaacttcctgcactccctggacagtctgtaccacccgtctcacctc
ctggcctcccagcagcagttccttcacccgtctcatcactctggggagctgagcggacac
accctgcctaacccccaccgcaactcagtggtgccaggagcggccacagtcatcatcatg
gtgtgcgtgggcttcctggttgtcatggtgatcctgggagtgtttcgaatccgctccatc
caccgccgtggcgagggcaccaggggagggtctaaagaggacagcggccaatgggatgac
tctgctctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggcatctca
gctgacactgaaggtgagggggaggaggacgaggaagtggtggagtcgcctgacaacgcc
aacgacgaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgtcgctac
taa
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