Oncorhynchus gorbuscha (pink salmon): 123998246
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Entry
123998246 CDS
T07892
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
ogo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123998246 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123998246 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
123998246 (abca7)
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
123998246 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
123998246
NCBI-ProteinID:
XP_046159247
LinkDB
All DBs
Position
LG02:18267937..18323834
Genome browser
AA seq
2354 aa
AA seq
DB search
MGIGTQLLLLLWKNITYRRRNKVQLIIELVWPLFLFLILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWVQGIICNINNPCFHNPTQGETPGRVGNFDNSILSRLLVDSQTILSYSGNQT
AFSGFQDLLDTIRRLGERPGAWPNLPVGEYLRANQTFSNFLLTNGSLSPSALDQLFRARL
NFQVVSLAGTGVMLKDIVCNATVLSQFLTVDQEDSMAELQSQLCAIPADTLQQAEQLFLS
QLDFSKFFTRDRLRANAGDLRVISQAVTSVSKELAVLMDDLSSLASFRELNSELRLLSPE
NRSTLPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDNDMEKDNVTT
PYCKSLIQSLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVRDVMKEVNKTFKDLQVLEEL
NGAWMEVAPGIKTYMESSVEIQLLQDLLRRPEVAVLVNLQLENTSWTAKRIARFLSTPKE
PRKEGAPLTWLDVYSDLNNTITTLAQVTQCFSLNKLEGAATEGQMIDRALELLEEREFWA
GIVFLLPNTSLPGLPPHVTYKIRMDIDDVARTNKIKDRFWDPGPAADPFSDMRYIWGGFV
YVQDLVERAVARVLSGVEQSTGLYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGVVYEKEARLKETMRIMGLGTGQLWVSWFISSLVPFLVSAGLLIALLKWGDILPYSN
PAVVFFFLTAFATATIMQCFLISAFFSRANLAAACGGLIYFALYLPYVLCVAWRDHLTTT
HRVLASLFSPVAFGFGCEYFSQYEEQGVGIQWFNLNSSPMEGDTYNFTTSIIMLHIDACI
YALATWYIEAVFPGEYGVPRPWNFVFSLNYWGGIPLEAGMPIPPAPRGQGGDRIEADPSH
LVLGVAIRNLVKIYKQGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTA
GTVYIKGMDIRTDMDIIRKTLGVCPQHNVLFDILTVEEHVWFYGRLKGLSGDEVRKELDT
LLEDVGLLHKRHEQTRNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLL
LKYRKDRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSPLFLKAKLGTGYYLTVVKKEG
LDTRTPSSASATKLPPATKDSDSSMSDDTGLGSDVSGSDLAALLTLAQRHIPGARLVEDV
GREAVINLPQKSAEDSSLAIFLTELDRRQADLGITSYGLSDTTLEEIFLRVAEETGVDVD
PEDSPGQADTPHGQGQGQGLSGEPSEDPGRKRLRKQEPQETDLLSGDGHGGVPLTGWGLT
WQQLRALFIKRWLYALRSRRGFFAQIVLPAVFVLIALLFSLIVPPFGKYPSLQLQPWMYG
EQYTFFSNDAPGDPAIQNLLDALLDRPGFGTKCMENSTDPQCLQEEEGMFMRPQILYSTW
QLFNRGNWTTDKPSPDCECSSEEVRRMLPDCPEGAGGIPPPQVQRLTGDILQNMTGRNIS
DYLVKTYPQIMKKSLTSATKKWINEFRYGGFSLGGRGTQAVPQAYQMEDSVMSIRSRYKV
AQNSSLDQILGRLPEFLGGLNSQNNVKVWYNNKGWHAMASFVNVMNNGLLRASLPPGPER
MKYGITAYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFSMSFVPASFVLFLIEERVSKA
KHLQFVSGVRPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSETNLPALVLLLLL
YGWSITPLMYPASFLFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDQHLNDINKILK
KVFLIFPHFCLGRGLIDMAKNQAMLDAFQRLGAKQTLDPLEWDFVGKNLFAMAVEGVVFF
LFTILLQYKFFVNCRPCSEPELPPLGPEDEDIARERERVKSGKAQADILTMMDLSKVYKA
GKKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAITYGEAFLSHHSVLTEMER
VHQLMGYCPQFDAICDLLTGREHLEFYARLRGVPEESVAKVAQWGVKKLGLTQYAEREAG
GYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRAVVLTSHS
MEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLSGTKPPEDPCTVDTYIKG
SFPGIELKERHQNVLQYQLPSHSCSLARVFDVLSNNHEELGIADYSVSQTTLDQVFVNFA
KEQSDDDLLREVTVNGGTPAPQPRRAAQPTQPGQTAKPAQTTKPPQSVKSSDGRPRETKP
NGVTDSGMAMTSRPQEKPQSSRGESRGESRRELSSRRSSKESSANGSKGTRETSGSKDPT
SLFLVGSSTQDSSV
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgggactcagctcttgctcctgctctggaagaacatcacttaccgcaggagg
aacaaggtccagttgattatcgagctggtctggcctctgttcctcttcctcatcctcatc
tcagtgcgtcactctcaccctccctacaaacagagccaatgtcatttccccaacaaggca
cttccctcagcaggcactctgccatgggttcaggggatcatctgcaacatcaacaacccc
tgtttccacaaccccactcagggggagaccccagggcgggtgggcaactttgacaactcc
atactctctcgactcttagtggactctcagacaatcctgtcctacagtggcaaccagaca
gccttctctggatttcaggaccttctagatactatacggagacttggagagaggccagga
gcctggccaaatcttcctgtgggagaatacctgcgagccaatcagactttctccaacttt
ctcctgaccaatggcagcctgtctccctctgccctcgaccagctgttcagggctcgcctg
aactttcaggtggtgtctctggcaggcactggggtgatgctgaaggacattgtgtgcaat
gccactgtgctgagccagttcctcactgtagatcaagaggattctatggcagagctgcag
agccagctctgtgccatcccagccgacaccctgcagcaagcagagcagctcttcctctcc
cagctggacttcagcaagttcttcacgagagacagactgagggccaacgccggtgacctc
cgggtcatcagtcaagcggtcacctccgtgtccaaggagttggcagtactcatggatgac
ctgtcctctcttgctagctttagggagttgaactcggagctgcgtctgctctcaccagag
aaccgttcgaccctgccacgggagagcttcagggccttctccaggattatgtgtggccac
cctgaggtgggtggcgagaggatcccttcactcaactggtacgaggacaatgacatcaag
tcgttcctgggcaagaacggcaccgaggacaacgacatggaaaaggacaatgtcaccacc
ccgtactgtaaaagcttgatccagagcctggagtccaacccactgtctcgcatcgtgtgg
agaggtatcaagcccctgttcattggcaaactgctgtacacaccggacacccctgccgta
cgcgacgtcatgaaagaggtgaacaagaccttcaaggacctgcaggtcctagaggagctg
aatggtgcctggatggaggtagcacctggtatcaagacctacatggagagtagtgtggag
atacagctgctgcaggatctgctgaggcgaccggaggtggccgtgttggttaatctgcag
ctggagaacacttcctggacagccaagcgcattgcccgcttcctgtccacacccaaagaa
cccaggaaagaaggagcgccccttacctggctggacgtgtactccgacctgaacaacacc
atcaccactctggctcaagttacccagtgtttctccctgaacaagctggagggtgctgcc
acagagggacagatgattgacagggccttggagctgctggaggagagagagttctgggct
gggatagtgttcctccttcccaacacgtctttacccggtctgccccctcatgtcacctac
aagatccgcatggacatcgacgatgttgcacgcaccaacaagatcaaggacaggttctgg
gacccaggcccagcagcggaccccttcagtgacatgcgctacatctgggggggctttgtg
tacgtacaggacctggtggagagagctgtggcccgtgtgctgagtggtgtggagcagtcc
actggcctctacatccagcagatgccctacccctgctacgtggatgacgttttcctacgc
gtgctgaaccgctcgctgcccctgttcatgacgctggcttggatctactcggtggccatg
atcatcaagggcgtggtgtacgaaaaggaggcacggctcaaggagaccatgaggatcatg
gggcttggtacaggccagctgtgggtcagctggttcatcagcagcctggtgcccttcctg
gtcagcgccggcctcctcattgctctgctcaagtggggggacatcctgccctacagcaac
ccggctgtggtgttcttcttcctgacggccttcgctacggccaccatcatgcagtgtttc
ctcatcagcgccttcttctcccgggccaacctggcagccgcctgcggaggcctcatctac
ttcgccctctacctgccctatgtgctgtgtgtggcctggagagaccacctcaccaccaca
caccgtgtcctagcaagcctgttttctcctgtggcctttggctttggctgtgagtatttc
tcccagtacgaggaacaaggagtgggcatccagtggttcaaccttaactccagccccatg
gagggagacacctacaatttcaccacttccataatcatgttgcatatcgatgcatgcatc
tatgctctggccacctggtacattgaagctgttttcccaggtgaatatggggtccccagg
ccatggaacttcgtgttcagtttgaactattggggaggaattcctctagaggccggcatg
cccatccctccggctcccagaggacagggaggagatcgcatcgaagccgacccctctcac
ctcgtactcggtgtggccatccgcaacctggtcaaaatctacaaacaaggtgccaagctg
gcggtcaaccacctcaatctcaagttctatgaagggcagatcacctctttccttgggcac
aacggtgctggcaaaacaaccaccatgtctatcctgacgggtctgtttccccccacggct
gggactgtgtacattaagggcatggacatccgcactgacatggacatcatcaggaaaacc
ttgggagtgtgtcctcagcacaatgtcctttttgacattctgaccgtagaggagcatgtg
tggttctatggtcgtctgaagggcctatcaggcgatgaggtgaggaaggagttggacact
ctcctggaggatgtgggcctgctgcacaaacgccacgaacagaccaggaacctgtctggt
ggtatgcagaggaagctgtcggtggccatagcatttgtggggggttcgaaggtagtggtc
ctggatgagcccacagctggggtggacccctactcccgtcgaggcatttgggacctgctg
ctcaagtaccgcaaagatcgcaccatcatcctctccacccactacatggatgaggctgac
cttctcggagaccgcatagccatcatctcccaagggaagctgtgctgctgcggctccccc
ctcttcctcaaggccaagctggggacgggctactacctcaccgtcgtcaagaaggaggga
ctggatactcgaacccccagtagtgccagcgctaccaaactgccccctgccacaaaggac
agtgactcctccatgagtgacgacacaggtctgggcagtgatgttagtggctcagacctg
gctgccctgttgaccctggcgcagcgtcacatccccggggcacggctggtggaggacgtg
ggccgtgaggcagtcatcaacctgccccagaagtcggcagaggacagcagtctggccatc
ttcctcacagagcttgacaggaggcaggctgatctgggcatcaccagctatggcctgtct
gacaccaccctggaggagatctttctgagagtggctgaggagacaggggtggacgtggac
ccagaggacagcccaggacaagctgacacaccccatgggcagggtcaaggacagggcttg
tctggagagccatctgaggatccaggaagaaaacggcttcgcaagcaagagccccaggag
acagacctgctgagtggggatggccatggcggtgtccctctgaccggttggggtttgaca
tggcagcagctccgtgctctcttcatcaagaggtggctgtatgccctccgcagtcgtagg
ggcttctttgctcagatcgtgctgcctgctgtgtttgtgttgatcgctctccttttcagc
ctcatcgtccctccgttcggaaagtacccctcgctccagcttcagccctggatgtacggg
gaacagtacacctttttcagcaacgatgcccctggggatcctgccattcagaatctgctg
gatgcccttctggaccggcctggatttggaaccaagtgcatggaaaacagcacggatcct
cagtgtttgcaggaggaggaaggcatgttcatgaggccccagattctctactccacctgg
cagctcttcaacaggggcaactggactacagacaagccatctcctgactgtgagtgcagc
tctgaggaggtccgcaggatgctaccagactgccctgaaggagccggaggcatcccccct
ccacaggtccagagattgacaggggatatcctgcagaatatgaccggccgcaatatctcg
gactacctggtcaagacttaccctcagataatgaagaaaagcctaacttcagccactaag
aagtggatcaatgaattcagatatgggggcttctctctggggggcagaggtactcaggct
gtcccacaggcctaccaaatggaggactcagtcatgtctattcggtcacgttacaaagtg
gcacagaatagctcattggatcagatcctgggtcgcctaccagagtttctaggtggactg
aatagtcagaacaatgttaaggtgtggtataacaacaagggttggcatgccatggcatcg
tttgtcaatgtcatgaacaatggcctgctccgtgccagcctgcccccagggccagagcga
atgaagtatggcataactgcctacaaccaccctctcaacctcaccaaggaacagctcact
gaaattgccatgatgaccacctcagtagatgttctggtgtccatctgtgtgatcttctcc
atgtcctttgtgccggccagctttgtgctgtttctcatcgaggagagggtcagcaaagcc
aagcaccttcagtttgtcagcggagtccggcctattctctactggctggctaacttcacc
tgggacatgctgaactatacagtcccggccactatggtggtcctcatcttcatttgcttc
cagcaacagtcctatgtgtctgaaaccaacctccctgctctggtcctgttgctcttgctt
tatggctggtctatcactcctctcatgtatccagcctccttcctgttcagtgtccccagc
actgcttatgttgtcctcacctcaatcaacctcttcatcggcatcaacggcagcatagcc
acctttgtcttggagctgttcgtagatcagcacttgaacgatatcaacaagatcctaaag
aaagtctttctgatcttcccccacttctgtctgggtcgaggcctcatcgacatggctaag
aaccaggctatgttggatgctttccagagactgggcgcaaagcagaccctggaccccctg
gaatgggactttgtggggaagaacttgtttgccatggctgtggagggtgtcgtgttcttt
ctcttcacaatactgctacagtacaagttctttgtcaactgcaggccctgctctgagcct
gagttgcctcctcttggcccggaggatgaggacatcgccagggagagggagagagtgaag
agtgggaaagcccaagccgatatactcaccatgatggacctgagtaaggtgtacaaagct
ggcaagaagccagcagtagatcgtctgtgtctgggtattcctcgtggtgagtgctttggc
ctgctgggggtaaatggggctgggaagacctccacgtttcgcatgctgactggagacact
gcgatcacctatggagaagcatttctcagtcatcacagtgtgctgacggagatggagcgg
gtccaccagctgatgggctactgcccccagtttgatgccatctgcgacctgctgactggc
agggagcacctggagttctacgctaggctccgaggggtgccagaggagtctgtggctaag
gtggctcaatggggagtgaagaagctgggactgacccagtatgcagagcgagaggccgga
ggctacagtggaggcaacaaacgcaaactctccactgctatctccctgatcggagctccc
cctgttatattcctggatgagcccaccactggcatggaccccaaggccaagagattcctg
tggaactgcatcctgagcgtcatcaaggagggaagggccgttgttctcacctcccacagt
atggaggaatgtgaagctctctgcacacgaatggccatcatggtgaacggaaggttccag
tgtctgggctccgttcaacatcttaagaacaggttcggggacggctacacgatcgtcctg
cgcctgtcggggaccaagcctcccgaggatccgtgcacagtggacacctacatcaagggc
tccttcccgggcatcgagctaaaggagaggcaccagaacgtgctgcagtaccagctgccc
tcccactcctgctccttggcgcgggtcttcgacgtgctttccaacaaccacgaggagctg
ggcatcgccgactactcagtgtcacagaccaccctggaccaggtgtttgtcaactttgcc
aaagagcagagcgatgatgacctgctgagggaagtgacagtcaacggtgggacaccagca
cctcaacccagaagagcggcccagcccacccaaccagggcaaacagccaaaccagctcaa
acaaccaagcctccccagtctgtcaagtcctcagacggcagacccagagagaccaagcca
aacggggtcacagacagtggcatggcgatgaccagcaggccacaggagaaaccccagtcg
agcaggggagagagcaggggagagagcaggagagagttgagtagtcggaggtcaagcaag
gaatcgtctgccaacggatccaagggcacaagggagacttcaggcagtaaggatccgacc
agtctgttcctagtgggtagcagcacacaagacagcagtgtgtaa
DBGET
integrated database retrieval system
