Oncorhynchus gorbuscha (pink salmon): 123998251
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Entry
123998251 CDS
T07892
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123998251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123998251
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123998251
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
123998251
NCBI-ProteinID:
XP_046159298
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All DBs
Position
LG01:16330544..16342175
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AA seq
684 aa
AA seq
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MSADTPPKVLFEHEGVFIHSNTEDSEDQDLLVSGFLRIIDKDGEIIVEYKPLEDTVDPSN
MLCAGKDSSSVMEWAYCPGEERSSPQQAVVLEQQQSYETEWDMINAVSFPKRKPCSNGEG
ALNHTHEKSKWSFTFSVWDLRSITVKEEGWSRLVFGMKEPPTSLPSLHFHQGGSEGFLDC
LRRYIIITEAPDDETCLLVSTPNRALSQSFENLLDDNNYGLVTKLKKDPYVTTLGGFSKV
TNYIFDAFRGPELEQQQRKPHEEVADLDILGLGEDIPGLGEVIPGLEINQQEEPGFEVIT
RMDLGARPEVTRREPLSAEDWAKHQDQEGRVENVPQLKKIIFKGGLCHAVRKEAWKFLLG
YYTWDSTYDERKGQQRRKTDEYFRMKLQWKSVSEEQERRNSRLRDCRSLIEKDVNRTDRT
NRFYEGIDNPGLVLLHDVLMTYCMYDFDLGYVQGMSDLLSPILYVMDNEVDAFWCFVSFM
DQMHQNFEEPMQGMKTQLIQLSTLLRLLDLAFWNYLESQDSGYLYFCFRWLLIRFKRELS
YPDVLRLWEVMWTGLPCQNFHLLVCCAILDSEKRKIMEENYGFNEILKHINELSMKLDIE
EILHKSEAICMQIRSCKDLPYSISEILGFNTESKFPRLEGREFGTLDSPQSPRPTQRQEV
FSNGHNRHYREPPTHNGCKVSFIS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgatactcctcccaaggtgttatttgaacatgaaggtgttttcattcactca
aatactgaagacagtgaagaccaagatctgcttgtttctgggttcctacggattattgat
aaggatggtgaaatcattgtggaatacaaacccttggaggacactgttgatccatccaac
atgctctgtgctggcaaggattccagctcagtgatggagtgggcctattgtcctggggag
gagaggtcgtcacctcagcaggccgtggtgctggagcagcagcagagctacgagaccgag
tgggacatgatcaacgcagtctcctttcccaagaggaaaccctgctccaatggagagggt
gcattgaaccacacgcatgagaaaagcaagtggtccttcaccttcagtgtgtgggacttg
aggtctatcacagtgaaggaggagggctggtcccgtctggtgttcggaatgaaggagcca
cccacctcactgccatccctccacttccaccaggggggcagtgaaggcttccttgactgc
ctgaggagatacatcataatcacagaggccccagatgatgaaacctgcctgctggtcagc
actcccaaccgagctctctctcagtccttcgagaaccttctggatgacaacaactacggc
cttgttactaagctgaagaaggatccctatgtgacgacgttgggtggcttctccaaggtc
accaactacatcttcgatgcgttccgcggcccagagctggagcagcagcagcggaagccc
catgaggaggtagctgacctggacatcctgggactgggagaggacatcccgggactggga
gaggtcatccccggcctggagatcaaccagcaggaggaacctggctttgaggttatcacc
aggatggacctgggcgccaggccagaggtaacaaggagggagccactgtctgcagaggac
tgggctaagcaccaggaccaggaaggaagggtggaaaatgtccctcaactcaagaaaatc
atattcaaaggcggcttgtgccatgcggtgaggaaagaggcctggaagtttctgctgggg
tattacacctgggacagcacctacgacgagcggaaaggccaacagaggaggaaaacggat
gagtacttcaggatgaagctccagtggaagtcagttagtgaggagcaggaaaggagaaac
tccaggttaagagactgcaggagcctgatagagaaggacgtgaacagaacagacagaacc
aacaggttctatgaaggcatagacaacccaggcctggtgttactacatgacgtcttgatg
acgtactgcatgtatgattttgatctgggttatgttcagggtatgagtgacctcctctcc
ccaatcctctatgtgatggacaacgaggtggatgccttctggtgttttgtctccttcatg
gatcaaatgcaccagaacttcgaagagccgatgcagggcatgaagactcagctgatccag
ctcagtactctgttgaggctgctggacctggccttctggaactacctcgagtcacaggat
tcaggttacctgtatttctgtttccggtggttactgatccgcttcaagagggagctcagt
tatccagatgtccttcgtctgtgggaggtcatgtggactggcctgccctgccaaaacttc
catctgctggtgtgctgtgccatcctagactcggagaaaaggaaaatcatggaggaaaac
tatggcttcaatgagatcctcaagcacatcaatgaactatcaatgaagctggacattgaa
gaaatccttcacaaatcagaagctatttgtatgcagatcagaagttgtaaggatttgcct
tattcaataagtgagatcctgggattcaacacagaaagcaaatttcccagattagaaggg
agggagtttggaactcttgattcccctcagtcccccagacccacacagagacaggaggtc
ttctctaatggtcacaacagacattacagagaaccccctactcacaatggctgcaaagtc
tccttcatatcatag
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