Oncorhynchus gorbuscha (pink salmon): 123998264
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Entry
123998264 CDS
T07892
Name
(RefSeq) nibrin-like isoform X1
KO
K10867
nibrin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03440
Homologous recombination
ogo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123998264
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
123998264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
123998264
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123998264
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123998264
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123998264
BRCA1-C complex
123998264
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
123998264
NCBI-ProteinID:
XP_046159275
LinkDB
All DBs
Position
LG15:83769919..83792458
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AA seq
840 aa
AA seq
DB search
MWTLNPLESGGVTHYLLPEKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDSPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLH
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTEALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNRMADSESMRKKPTIPGATLSQNAPVDETVMPAVSQNITAYAVNTEPS
QGISGVEVAGVSAVGETPERDQSRTTSHLNRSKPSGRELSGTCTVAETMMSSFSASDSAG
GGGSDRKKGELQHTGGGKGDAITRLLATAPRTNGGVQTMSPQKRSSQKQQVSQKCSPQKQ
SALTNFFQPVGKKRPREGKESPTVQSEAKFSRREEEKEKMKRTVPQHSETSNPTHTPTGR
SQGQHSSGAHLFPGQTEALSEGFSNPAQQGLQSRKRKEMEEETKGSGASEIEMDELESIM
SEDMDELDEPMSVSQGQRLKLREQSSTNQGQRSQLIDKNSTNRKSLLETVDLTSANKKQR
VYSVEPIAANHRSGLDSEERSSASRRQRVEPVAEVKDEEVSFIESKPVNGVTPGHLEEPE
TDVKQEASGLGGENLPSRLIVVEFKSLTVATPARPKPRPMETHGNVIRKDFKRFRKVPVP
GAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPTKKR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagagaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgatcagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctatcaggagactcccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcat
cttctgggtggccggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcaccgaagccctgcaacagaaacaaccacctccaaaagct
gagagtttctttccagagatagacgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactggcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccgttgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgccccactccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccttccaatcgaatggctgactcagaatcc
atgagaaagaaacctaccatccctggcgccacgctatcccagaatgcaccagtggacgag
actgtaatgccagcggtgtctcagaacatcacagcctatgctgtaaacacagagccgtca
cagggcatcagtggggtggaggtggctggggtgagcgcagttggagagacccccgagagg
gaccagagccggaccacctctcatcttaaccgatccaaaccctcaggccgagagctgtca
gggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagtgctggt
ggtggcggctcggacagaaaaaagggagagctacaacatacaggtggagggaaaggtgat
gctatcaccagattactggccacagcccctcggaccaatggaggagtgcagacgatgtct
ccacagaagcgctcctcccagaaacaacaggtatcgcagaaatgttccccccagaaacag
tctgccctcactaatttcttccagccggtcggcaagaaaagacctcgggaaggcaaggag
tcccctactgtccaatcagaggccaagttctccaggagggaagaagagaaggagaagatg
aagaggacagtaccacagcactcagagacctccaaccccacacacacccccacaggcagg
tcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctgtca
gaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagatggag
gaggagactaaagggagtggggcttcagagatagagatggacgaactggagtccatcatg
tctgaggacatggacgaattggatgagcccatgtcagtcagtcaaggccagcggttaaag
ctgagggaacagagttcaaccaatcaaggccagaggtctcaactgatagacaagaactca
accaatagaaaatcgctcctagagacagtggatcttacctctgccaataagaaacagcgg
gtttattcagtggaaccaatcgcagccaatcataggtcaggcttggattcagaagagcga
tcgtcagccagcagacgacagcgagtggagcctgtagctgaggtcaaagacgaagaggtg
tctttcattgaatcaaaaccagttaatggtgtgacccctggtcatctggaagagccagag
actgatgtcaaacaggaagcctcaggtttagggggtgagaatctccccagcagacttata
gtggtggagttcaaatccctcaccgtggcaacaccggcaagacctaaaccacgccccatg
gagacgcacggcaatgtcatcaggaaggactttaaacgcttccgcaaggtcccagttccc
ggcgcccagggtttgcccaacatcatcggagggtcagacctgttggcccacaaccgaggc
aagaactctgagctggaggagtggctgagagacgcagcagaggatgagcgtcagaacaag
aaagaggagactttgggagatgacctcttcaggtacaaccccaaacccaccaagaaaaga
tga
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