Oncorhynchus gorbuscha (pink salmon): 123998301
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Entry
123998301 CDS
T07892
Name
(RefSeq) cadherin-17-like
KO
K06811
cadherin 17, LI cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123998301
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
123998301
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
RET_CLD1
RibLong
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
123998301
NCBI-ProteinID:
XP_046159348
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Position
LG15:84568272..84600828
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AA seq
865 aa
AA seq
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MAHPTMHLLLLSLLIATAAGKGLEKGPLENKVLDVPEGTPVPYALYQFQTSHVEVDGFRL
TGETEAKISISEDGWLYLEQTLDWAHTQTHTLELEALVGSEPVEGPVIITINVLDVNNHA
PSFNQTDYIGIVKERTPAGVPFARVFATDLDDPESPNAHLSYTLVSQIPNRDNTLFFEIN
SNTGEISTTAEGERLLKARESVIHSRGGDFSDSLKKRFDDYCTPTGDIPYELNPFYSCVQ
RAESRRLNPLEDPDFTLIVRVEDMGGESVSALNGNTRVKIVVQENLWVNPGPINLREQLK
GIYPMPIGKVQSNDPSAFYRLVQKERELTFPFNVTEEGDILLTEELDREDKAMYILVVFA
EDSYGNQVDPPLEVQVVVDDVNDNAPICEEELSVFEVQENEPTGSPVGHLMVHDADDDNT
PNALLSYSLVTQTPSSVFTIDGITGRIQAKQMLQRRDATEYHLTVRVNDPGFSTECKVLI
KVIDINNELPIFQMNDYGSHNLSEDTALGHTLLTVKATDADDPGTGSSRIEFHITAGNED
GVFAMETDDNGEGRLVVAKPLNYETASSYKLQIDARNPEPLVSGLEYGAESSAVVSVAVS
DVDEAPVFDMDILDVTVPEDTKEGATLLKIDAKDPEGKEILFKMEGDTKGWLEIDPATGE
IKIKNKAVLDRETVESFHFTVVAFEKANPELSTEREVSVRLLDVNDNVPKLTENQAFICV
KKPQPIVLTALDADADPFGAPFTFSLAQGKKSPNWDLSAVDGTSAKLTLKKSPSEDKTFL
IPISIKDNAGMGITQKFEVRVCNCTELGYCFTEPGVHVGVLGMPTTIGILAGTVGFIALV
LIIAFHRIKKDNQKKALLGETDAIL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcccacaatgcacctgctgctgctcagcctcctcatcgccaccgctgctggg
aaaggcctggagaagggaccactggagaacaaggttctagacgtaccagaggggacacct
gtaccctacgccctctaccagttccaaacgtcccacgtcgaggttgatgggttcagattg
acaggagagactgaagcaaagatcagcatctcagaggacggctggctctacctggaacaa
accctggactgggcccacacacagacacatactctggagctggaggccttagtgggttcg
gaaccagtagaaggtccagtcatcatcaccatcaacgtgttggatgtcaacaaccacgcc
ccgtccttcaaccagactgactacatcggcatcgtcaaggaacgtacccccgcaggtgtt
ccatttgcgcgtgtgtttgctactgacctggacgacccagagtctcccaacgcccatctg
agttacaccttggtctcccagatccccaacagagacaacaccctgttcttcgagatcaac
agcaacacaggagagatttctactactgccgagggagagcgtctgctgaaggccagagaa
agtgttattcattccagaggaggggacttcagtgattctctgaagaagaggtttgatgac
tactgcacccccacaggggacatcccttatgaactcaaccccttctacagctgtgtgcag
agagcagagtctcggaggctgaaccctctggaagacccagacttcactctgattgttcgt
gtggaggacatgggtggggagtcagtgagcgctctcaacggtaacacgagggttaaaatt
gtcgtgcaggagaacctgtgggtcaatcctggaccgatcaacctcagagaacagttgaaa
gggatataccccatgcccatcggcaaggtccagtctaatgatcccagtgccttctacagg
ctggtacagaaagaacgggagctgacgttccccttcaatgtcacggaggaaggagacatt
ctgctgactgaggagctggacagagaggacaaggccatgtacatcctggtggtgtttgct
gaggatagctatggtaaccaggtagaccctcccctggaagtgcaggtggtggtggacgat
gttaatgataacgctccaatctgtgaggaggaactcagtgtgtttgaagtgcaggagaac
gaacccacaggcagcccagtcggacatctgatggtgcatgatgctgatgatgacaacaca
cccaacgcactgctctcctattcgttggtgacccaaaccccatcctccgtctttaccatc
gatggcatcaccggccgcatccaggccaagcagatgctccaacgcagagatgcaacagag
taccacctcactgtcagagtaaacgacccaggtttcagcacagaatgtaaggtcctcatc
aaggttatcgacatcaacaatgagctgcccatcttccagatgaatgactatggtagtcac
aacctgtctgaagacacagctctaggccacaccctcctgacagtgaaagccacagacgct
gacgaccctggaacaggaagctcccgcatcgagttccacataaccgctggcaacgaagat
ggagttttcgccatggagacagatgacaatggggagggcaggcttgttgttgctaagcct
ctgaactatgagactgcttcctcctataagctacagattgatgctcgtaacccagagccg
ctggtgagcggtctcgagtacggcgctgagtcgtccgccgtggtctcggtagcggtcagt
gacgttgatgaggctccagtgtttgacatggacattctggatgtcacggtgccagaggac
accaaggagggagctacactgctcaaaatagacgccaaggacccagagggaaaagagata
ctgttcaagatggagggagacactaagggttggttggagattgatcctgctactggagag
ataaagataaagaataaagctgtgctggacagagagacggtggagtccttccactttact
gttgtcgccttcgagaaagccaatccagagctgtccacagagcgcgaggtgtctgtgagg
ctgctggatgtgaatgacaatgtccccaagctgacagagaaccaggccttcatctgtgtg
aagaagcctcagcctatagtcctgacggccctggacgcggacgcagaccccttcggagca
cctttcacattcagcctggcccagggcaagaagtcccccaactgggacctaagcgctgtg
gacggtacgtctgctaaactgaccctgaagaaatctcccagcgaggacaaaaccttccta
atccccatcagcatcaaagacaacgctggcatgggcatcacacagaagtttgaggtgcga
gtgtgtaactgcacagagttgggatactgtttcaccgagccgggcgttcatgtaggggtg
ttaggaatgcccaccaccatcggaatcctggctggaactgtcggattcatcgccctggtc
ctgatcatcgctttccatcgtataaagaaggacaaccagaagaaagccttgctgggagaa
acggacgccattctctag
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