Oncorhynchus gorbuscha (pink salmon): 123998308
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Entry
123998308 CDS
T07892
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123998308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
123998308
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
123998308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_GCN1
HEAT_MROH2B_C
HEAT_GCN1_C
HEAT_EF3_N
TPR_CAND1
TPR_IPO5
Vac14_Fab1_bd
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
123998308
NCBI-ProteinID:
XP_046159361
LinkDB
All DBs
Position
LG15:84658312..84684659
Genome browser
AA seq
942 aa
AA seq
DB search
MTKCKKKKRQDDFQKVKLKVGKTKPKADNATNINFRTKGINLTEQLKKDANAPSTHRKLN
IKDLLSQLHHYSGTVKQGALVGLRELLTLHPSELDQHLSSLLSEAAAVFTDKDPNVRMSA
TRLLRFIAQSVPAERTSPFFPLLSAHLSCAMTHIETGIQEDALKVLDVLLDHYPALLAAR
PALLLTNFLELISHRSTGGGARKGQEGKGRSWALSVNPNRNVTGQQWRLTVLLRLGRFLQ
AVVEERRAEDGVACVSGDMFSVLNGQGGANAPLELNWEELTYRKGGFQVFEHSGAMPTPH
STFKLRPETEPGAGVSEGLGTGEAIRGFASTLVPLLLDVWVEASASDRSKTDSAHLLTPD
AMSLMYQVLSILQLLRKLAPQREYQDTLDVWFRSEYLGDFKQHFMKNFPYGNLDTPKQRR
KTDPKRSKQATTIPGQTVEPLALNVLLCQVMVSMVTLSQREGQAQEPDAEWLMPLRGFVQ
ETLSSGAKLSQRHLHTLLETVWRMVITQRSRAVTEDLLQAVYVQYQQMNLNLQTRTLLLS
FYSRLYLQEHNHTHIARSRVLSRWLAALPLQLSQLGHRNPALSDRLLLSIQAAASRGNKA
LLNSLHTHACRLYDPQEGSVVLLPAESQQRLVQVLYFLPVMSQGLLANLSRCCTAGRVSA
GLAASLIRIIHLRSSLSGWSVGSQDATLRDVDYISFLFSTLTGFSSDELATLQEAGDESV
LPPSPLSPLSLYPTPLEQFTHHWDVVEEVCHCLETLGSRSQCFDVLQNGICKNLTGLSVV
PDSMAAGLLRAVARLLDLSFLPSEPLLRFLSRCCLSLLSLLLTLQQDTASENNHKREAVW
GACVAVLSSIPRLLRLVLQSLRVRDLCEEELPQLAQILSLLLQHTALRNHMLANATLLQH
IIQDLTRYCRGEAKEQWMTDLLYCYSVTMATHRGNLGLRDIY
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatgcaagaagaagaagaggcaggatgacttccagaaggtcaagctgaaggtg
gggaagaccaagcctaaagctgacaacgccaccaacatcaacttccgcaccaagggaata
aacctaactgaacagctgaagaaagatgctaatgcacccagcacacaccggaagctcaac
atcaaggacctgttgtcccagctgcatcactacagtggtacagtgaaacagggagctctt
gtgggactgagggagctgctgacccttcacccctcagagttagaccaacacctctccagt
ctgctcagcgaggctgctgccgtcttcacagacaaggacccgaatgtacggatgtctgcc
acacgcctgctcaggttcatagcccagagtgtgccagcggagcggacgtctccattcttc
cctctcctctctgcccacctctcctgtgccatgacccacatcgagacgggtatccaggag
gatgccctgaaagtcctcgacgttttgctggaccactatcctgccctgctggccgctcgt
cccgccctgctgctcaccaacttcctggagctgatctcacacagaagtaccgggggcggg
gcaaggaaggggcaggaggggaaggggaggagctgggccctgtcagtcaaccctaacagg
aacgtgactggtcagcagtggagactcacagtgctgctcagactggggcgttttcttcag
gcggtagttgaggagaggcgagcggaggatggggttgcatgtgtctcaggtgacatgttc
agtgttttgaatggacaaggaggagctaacgcacctttggagctcaactgggaggagctt
acctacagaaaaggtggatttcaggtgtttgaacattcaggagccatgcccactccgcat
tccaccttcaaactcaggccggagactgagcctggggctggggtgagtgaggggctgggc
acaggggaggctatacggggctttgcctccaccctggtgccccttctactagacgtctgg
gtagaggctagtgccagcgaccggagcaagactgacagtgctcatctcctcacccccgac
gccatgtcactgatgtaccaggtcctctccatactacagctgctacgcaagctggcgcca
cagagagaataccaggatacactggatgtgtggtttcgtagtgagtacctgggggatttt
aagcagcacttcatgaagaacttcccctatggaaatctggacacccctaaacaaaggcgg
aagacagaccccaagaggagtaagcaggccactacaatcccagggcagacagtggaaccc
ttggctctgaacgtgctgctctgccaggtcatggtttccatggttaccctcagccagagg
gaggggcaagcccaggagcccgatgctgagtggctgatgcctctgagagggtttgtccaa
gagactctgtccagtggggccaagctgagccaaagacacctacatacactcctggagact
gtctggagaatggtcatcacacaacgcagcagggcggtgacggaggatctgttacaggcg
gtgtatgttcagtaccagcagatgaacctgaatctgcagaccagaacactgctactttcc
ttctatagcagactgtacctacaggaacacaaccacacacacatcgccaggagtagagtg
ttgtctcggtggctggctgctctaccgctccagttgtcccagctgggccaccgtaaccct
gccctctcagacaggctcctgctctccatccaggctgctgcctcccgcgggaacaaggcc
ctgctgaactccctacacacgcatgcatgcaggctctacgacccacaggagggcagtgtg
gtattgttaccggctgaatctcagcagcgattggtccaggtactctacttcctgcctgtg
atgtcacagggtctgttggccaatctgagtcgctgctgcactgcgggacgcgtctctgcc
ggcctggctgcctccctcatacgcatcatacacctcaggtcctctttgagtggctggtca
gtagggtctcaggacgcgaccctgcgtgatgttgactacatcagcttcctgttctccacc
ctcacagggttttcgtctgatgagctggccaccctgcaggaggctggggatgagagcgtg
ctccctccctcccccctctcccccctcagtctctaccccacccccctggagcaattcaca
caccactgggacgtggtggaggaagtgtgccactgcttggagacgctggggtctcgttca
cagtgctttgacgtgctgcagaacggcatctgcaagaacctgactggtctgtctgtggta
ccagacagtatggcagcagggttgttgagagcagtggccagactgttggacctgtccttc
ctccccagtgaacctctactgaggttcctgtcccgctgctgcctcagcctactgtctctg
ctactgaccctacagcaggacaccgcctcagagaacaaccacaagagggaggcagtgtgg
ggcgcgtgtgtggcagtgctgagcagcattccccggctgttgcggttggttctgcagtca
ttgcgagttagggacctgtgtgaggaggagctgcctcagctggcccagatactgtccctg
ctgctgcagcacacagcgctacgcaaccacatgctggcaaacgcaactctactacaacac
attatacaggacctcacgaggtactgtcgaggtgaggccaaggagcagtggatgactgac
ctgctgtactgctacagcgtaaccatggcgactcatcggggaaacctggggctccgagac
atctactga
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