Oncorhynchus gorbuscha (pink salmon): 123998628
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Entry
123998628 CDS
T07892
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome-like isoform X1
KO
K28154
splicing regulator ARVCF
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123998628
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123998628
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
V-ATPase_H_N
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
123998628
NCBI-ProteinID:
XP_046159631
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All DBs
Position
LG16:complement(77814660..77843153)
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AA seq
902 aa
AA seq
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MRGVLSSFSMEQIPEGPSSLGGMILEPKEPPGEHPLPADDDLDTPTSNTSVVTSTNGSST
TETQYSEAEDPKAVKLGNDQADTPDTTALQLPPAPQPPSVPRIPLVSDDPSLKPSPLTNG
QHSSESLTTPITTTVTTNTLPPPYNNTNSEPQTEKPEGQNSAYTLPDPPFPGLGGGMCAG
YGSLSRGGVHQSSLHTYWPSRNYQPQPGGHYTLPLPRDIYGKVGLTNQTEREGPGDDTLG
GIHQLRPITTMELLREPSRTRPLSFPCLSPPSPLNPSIPLYFFRGGYEEALMSQVDGDPI
SFFQAMSRAQMLQFPHKRSSMVSLDSIRKDPRWRDPNLSEVITMLSHPMDPVKSNAAAYL
QHLCYENDRIKQDVRQLKGVPVLVGLLDHPKAEVHRKACGALRNISYGKDHHNKVAIKNC
DGIPALVRLLRKSSNMEVTELVTGTLWNLSSHEPLKMMVINHGLQTLTDEVIIPHSGWRR
DLTEHSRPQETEWTTVFKNTSGCLRNVSSDGAEARQRLRECEGLVDALLHALQSAVANKE
TDNKSVENCVCILRNLSYHVHKEVPGAERFQEPVANQVPRSGSGGKKKNEGDCFGGKKPK
EEWFNQSWRNGPDDKKYGTLDLPKRTQPTKGLELLYQPEVVRLYLSLLTRSQNHNTLEAA
AGALQNLAAGHWAWSSYIRATVRKEKGLPVLVELLRSDGDKVVRAVAIALRNLAIDRRNK
DLIGSYAMRDLVSNLPSGQQRPAKNLEGDTVVAILNTIHEIISDSPENARGLIQGHGIQK
LVAINKTSQSVRETKAASHVLQTVWAYKDLRNSLYKGGWNKSHFKSTTSGIPKKTKTGKA
AYDDITLPLMEKNQDGYSTVELSDRVGDGLLQSIPERKHFIRAGRPAVGLVERKPPPLDS
WV
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtgtcctgtcctcattttcaatggagcagatcccagaggggccctcctcactg
gggggcatgatcctggagcccaaggagcccccgggggagcatccattgcctgcagatgat
gacctggacacacccacctccaacacctccgtggtcacctccaccaatggcagttccact
acagagacacaatactcagaggcagaggaccccaaggctgttaaactggggaatgaccaa
gcagacactccagacaccaccgcccttcagcttcccccagccccgcagcctccctcggtt
ccccggatccccttggtttcagacgacccatctctgaagcccagccctctaaccaacggc
caacactcctctgagtccctcacaacccctatcacaaccactgttaccaccaacactctc
cctcctccctacaacaacaccaacagtgagccccagacagagaagcctgaaggacagaac
agcgcctacaccctccctgaccctccctttcctggcctgggtggtggcatgtgtgctggg
tatggcagcctgtctcgtggtggtgtccaccagagctccctccacacctactggccctcc
aggaactaccagccccagcctgggggtcactacaccctgcccctccccagggacatctac
ggcaaggtgggcctgaccaaccaaaccgagagggaaggaccaggggacgacaccctgggt
ggaattcaccagctcagacccatcactaccatggagctcctgagggaaccttccagaacc
aggcctctctctttcccttgtctcagccccccctccccacttaacccctccatcccttta
tattttttcagaggtggatacgaggaggctctcatgtcccaggtggatggggatcccatc
tccttcttccaggccatgtccagggcccagatgctacagttcccccacaagcgcagtagc
atggtcagcctggacagcatccgtaaggacccccgctggagggaccccaacctgagtgag
gtcatcaccatgctcagccaccccatggacccggtcaagtccaacgccgccgcctacttg
cagcacctgtgctacgagaacgaccgcataaagcaggacgtcaggcagctaaagggggtt
ccagtactggtgggcctcctggaccaccctaaagccgaggtccaccgcaaggcgtgtgga
gccctgaggaacatctcctacgggaaagaccaccacaacaaggtggccatcaagaactgt
gacggcatcccggccctggtcagactgctgaggaagtccagtaacatggaggtcacagag
ttggtcacaggaaccctgtggaatctgtcctcccatgagcctctgaagatgatggtcatc
aatcacgggctccagacgctgactgatgaggtcatcatcccccactctggctggaggaga
gacctcactgagcactcaagaccccaggagaccgagtggacaaccgtgttcaagaacacc
tcagggtgtctcaggaatgtgagctcagatggggcagaggctcgccagaggctgagggag
tgtgaggggctggtggacgctctcctccatgccctacagtcagcggttgccaacaaggag
acagacaataagtcagtagagaactgcgtctgtatcctgagaaacctctcctaccatgtc
cacaaagaggtgccaggagcggagcgatttcaggaacccgtagccaatcaggtgccacgg
tcaggatcaggagggaagaagaagaatgagggagactgttttggagggaaaaagcccaag
gaggagtggttcaatcaaagctggagaaacggaccagatgacaaaaaatatggtacactg
gatttacccaaacgcacacaaccaacgaaaggtctggagctgctgtaccagccagaggtg
gtgaggctgtacctgtctctcctcactcgcagtcaaaaccacaacaccctggaggcagca
gccggagctctgcagaaccttgctgcaggtcactgggcttggtccagttacatccgggcc
acagttaggaaggagaaaggtctgcctgtcctggtggagctactgcgttcagatggtgat
aaagtggtccgagctgtagctattgctctacgcaacctggccatagatcgacggaacaaa
gacctcataggaagctatgccatgagggacctggtcagtaacctgcccagtggtcagcag
cgaccagccaagaacctggaaggggacacagtggtggccattctgaacactatccatgag
atcatctcagacagccctgagaatgcccgtggtctcatacagggtcacggcatccagaaa
ctggtggccatcaacaagacaagccaatctgtgcgggagaccaaagcagcatctcatgtc
ctacagacagtgtgggcctacaaggacctgagaaatagcctctacaagggaggctggaac
aagagccactttaagtcaaccactagtggaatacccaaaaaaactaagaccggaaaggca
gcctatgatgacatcacactccctctgatggagaaaaaccaagatggatactccaccgtg
gagctgagtgacagagtgggtgatgggttactccagagtatcccagagaggaagcacttc
atccgggctggaaggcctgcagtgggtctggtggaacgcaaacctccacccctcgattcc
tgggtctga
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