Oncorhynchus gorbuscha (pink salmon): 123998709
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Entry
123998709 CDS
T07892
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04114
Oocyte meiosis
ogo04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
123998709
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
123998709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123998709
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123998709
Factors involved in mRNA localization
Trans-acting binding proteins
123998709
mRNA cycle factors
P-body specific factors
123998709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
123998709
NCBI-ProteinID:
XP_046159756
LinkDB
All DBs
Position
LG16:39497247..39521715
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AA seq
709 aa
AA seq
DB search
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNASQSPGAFINSTTAGNGSNNGSPW
LFSATAAHSSMQDEILGSEKPKAQQQEMQETQEKQLLSPGHPESGIVSELEKARSEENKV
EGGLSEGSNGKEKLRLESPVLTGFDYQETSGLGTPCQSSTSSSLTGFNNWSAAISQTPST
IINEDVSFFNPAASANNGPLLFQNFSHHVSPGFGGNFSPQIGPISQHHPPHPHFQHPHNQ
HQQHRRSPASPHPPPFPHRNAAFSQLPHLSNNLNKPPSPWGSYQSPSPSPSSTSWSPGGG
YGGWGGSQGREYRRGLNGGMTPLNSISPLKKTFPNNHVPSQKYSRTSPGFNPKSWMDESV
SRSENIFPFQERTRSFDGFNMHSLENSLIDIMRAEQDTLKARNYGRRRVHSSLFPMEDGF
PDDERGEQSLPGLGSPHCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFV
DWPHKAESKSYFPPKGYAFLLFQDESSVQALIEACIEEDGKLYLCVSSPTIKDKPVQIRP
WNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY
PKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFA
PFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggtttggagtcttagtgcaaaataacactggcaacaagtctgctttc
ccagttagaattcatccacatctgcaacctccacaccatcatcagaatgcatctcaaagc
cctggtgcttttataaacagtaccacagctggcaatggcagtaacaatgggtcaccttgg
ctgttttcagcaacagctgcccacagcagcatgcaagatgaaattcttgggtcagaaaag
cccaaagcccagcaacaggaaatgcaagaaacgcaagaaaaacagctactatcccctggc
cacccggagtctggaatcgtatcggagttagagaaggcgaggtcagaggagaacaaggtg
gagggcggcctctctgagggtagcaatggaaaagagaagctgcgcctcgagtccccagta
ctgacaggcttcgactaccaagagacatcaggtcttgggactccgtgccagtccagtacc
tcctcgtccctgactggcttcaacaactggtcagctgctatttcccagaccccctccacc
atcatcaacgaggatgtcagcttctttaacccagctgcctctgctaacaacgggcccctc
ctgttccagaatttctcccaccacgtcagcccaggcttcgggggaaacttctctccccag
attggacccatctcccagcaccatcccccacaccctcactttcagcatccccacaaccag
caccaacagcaccgaaggtccccggccagcccccaccctcctcccttcccccataggaat
gctgcctttagccagttgccgcatttgtccaataacctgaataagcccccgtcaccttgg
ggtagctaccaaagcccttctccctccccctcctccacctcctggagccccggtgggggc
tatggtgggtggggaggctcccaggggcgtgagtaccgtcgaggcctcaacggaggcatg
actcccctgaactcaatctccccgctgaagaagaccttccccaacaaccacgtgccgtcg
cagaagtactcccgcaccagccctggcttcaaccccaagtcctggatggacgagagtgtg
agcaggagtgagaacatcttccccttccaggagcgcaccagatcctttgatggcttcaac
atgcactccctggagaactctctcattgacatcatgagggccgagcaagataccctgaaa
gcaaggaattatgggaggagacgagtccattcttccctgttccccatggaggatggtttc
cctgacgacgagcgtggcgagcagagcctgcctggcctaggctcaccccactgcttcccc
caccagaacggggagcgagtggagcgctactcacgcaaggtcttcgttggcggtctcccc
cctgatattgatgaagatgagataacggctagtttccgtcgctttggacacctctttgtg
gactggcctcacaaggcagagagcaaatcttactttcccccgaaaggttatgccttcctg
ctgttccaggatgagagctctgtgcaggccctgattgaggcctgtattgaagaggacggc
aagctctacctgtgtgtgtccagccccaccatcaaagacaagccggtccagatccgcccc
tggaacctgaacgacagtgactttgtgatggacggctcccagcctctggaccccaggaag
accatatttgtgggtggggtgccacgccctctccgtgcagtggagctagcaatgatcatg
gacaggctgtatggaggggtgtgctacgccggtatcgacacagaccccgagctcaagtac
cccaagggagcagggcgggtcgccttctctaatcagcagagctacattgctgctatcagc
gctcgttttgtccaactgcagcatggagaaatcgataaacgggtggaagtgaagccatac
gtcctggacgaccagctgtgtgatgagtgtcagggaacccggtgtgggggcaagtttgcc
cccttcttctgcgccaatgtcacctgtcttcagtattactgtgaatactgctgggcggcc
attcactcacgcgccggccgagagttccacaagccactggtaaaggaaggaggggaccgg
cctaggcacatctccttccgctggaactga
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