Oncorhynchus gorbuscha (pink salmon): 123998723
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Entry
123998723 CDS
T07892
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04080
Neuroactive ligand-receptor interaction
ogo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123998723
04081 Hormone signaling
123998723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123998723
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
123998723
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123998723
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
123998723
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
123998723
NCBI-ProteinID:
XP_046159777
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Position
LG16:33059087..33179245
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AA seq
416 aa
AA seq
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MEPISNVEDPNSSEGDEKRWPDGPKRKRKNSTCSVKSMSALSLSVQGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFRK
CIAVGMAMDLVLDDSKRVAKRRLIEENREKRKKDEIVKTLQTRPEPDSSEWELIRHVTEA
HRHTNAQGSHWKQKRKFLPEDIGQSPGVPTPDGDKVDLEAFSEFTKIITPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALLQAVLLMSSDRSGLTSVDKIEKCQETYLLAFEHYIN
HRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatttccaacgtcgaggaccccaactcatcagagggagatgagaaacggtgg
cctgatggcccaaaaaggaagagaaagaacagcacatgttcggtgaagagcatgtctgca
ctgagcctctctgtccaaggatacatccccagctacttggagaaggatgagccgtgtgtg
gtatgtggagacaaggccaccggctaccattaccgctgcatcacctgtgagggctgcaag
ggtttcttcaggcgcaccatccagaagaaccttcatccggcttactcctgtaagtacgat
ggctgctgtatcatcgacaagatcacaaggaaccagtgccaactgtgtcgcttcaggaag
tgcatcgcagttggcatggccatggacttggtgctggacgactctaagcgggttgccaag
cggcgtctgattgaggagaaccgggagaagaggaagaaagacgagattgtgaagacattg
cagacccgtccggagcccgacagctcggagtgggagctgattcgccatgtgacagaggcc
caccgccacaccaacgcgcagggctcccactggaaacagaaacgcaagttcctgcctgag
gatataggtcagtcccccggggttcccaccccagacggagacaaggtagacctggaggcc
ttcagcgagttcaccaagatcatcacccctgccatcacacgcgtcgtcgactttgccaaa
aaactacccatgttctcagagctgccttgtgaggaccagatcatcctattgaaaggatgc
tgtatggagatcatgtccctgcgtgccgccgtgcgctatgacccagagagcgagacgctt
accctgagcggcgagatggcggtgaagagggagcagctgaagaatggcgggctgggcgtg
gtgtcggacgccatctttgatttgggcaagagtctggcacagtttaacctggacgactct
gaggtggccctgctgcaggctgtgctcctcatgagctcagatcgctcgggcctgacgtca
gtagataagatcgagaagtgccaggagacgtacctgcttgccttcgagcactacatcaac
caccgcaagcacaacattccccacttctggcccaagttgctgatgaaggtgacggacctg
aggatgatcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gagctcttccctccgctcttcctggaggtcttcgaggaccaggaagtatga
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