Oncorhynchus gorbuscha (pink salmon): 123998741
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Entry
123998741 CDS
T07892
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123998741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123998741
03036 Chromosome and associated proteins [BR:
ogo03036
]
123998741
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123998741
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123998741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
123998741
NCBI-ProteinID:
XP_046159810
LinkDB
All DBs
Position
LG16:66366451..66390321
Genome browser
AA seq
1827 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNTGFGATTGGFGASAFGATNNTGGLFGATQNKPV
VTANPQQIHTGAGRGGGLFGSSTFSQPVTSSTSSGFGFGTASGTSTSLFGSTNTGGGGGL
FSQQSNAFGAAKPASFGTFGTSTANTGGLFGATNSNPFGGASASLFGASGFTQQAAQPGT
TVKFNPATGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMA
APTGGLFGAAAAATPSTGAAGLFGSSATNTGFSFGQAKTNFGTSTGGFGTATGSLFGQQQ
QPQQAQQAASLFKPFGQATTTPNTGFSFGNTSTMGQPQQTSTMGGLFGSTAASQAGGLFG
NTAQTTPATGFGTGTGLFGQTNTAFGNVGTQQSLFGNKTAGFGATTTSASSFGTGTGLFG
NKSALTLGTGTNPSNFGFGPTAAGGSLFGNKTAAGGLGTGLGAGFGAAVGTGQMSLFGNN
KTLGSTLGTIGAFGPQGFSTGTSTLGFGAQQQPVALTDPNAAAAQQAVLQQQINALAYSP
FGDSPLFRNPLSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALTSSGSSK
SQLFDGLDDDEPSLTNGAFMPRKSIKKLVLKNLNGSSLYSSPINRDTDDLASPPEYPLNG
LSASVDEDDYVREVVEGGAEDDLEINKFYTKPSLQDTISELNAHRVGARGRNGLEVSSED
ISLGEDSIQEEREEEVQEVPPHPAGIVLCRVGYYTIPAMDELAKMVDENGVCVVENFTVG
RKGYGSVFFHGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPAEGEGLNRRAEVTLDGVWP
NDKTTCTQIKNPERLSEMNYEGRLENASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDS
DEDEEVPLKVDPKKLKTATTLPPGLQQPPPSQQQVAPQAQSTAVLELLSRMSEVDSDMAD
ITQDAPGESMLEVGESGVGEDKGSRLGTVTPTEHNPVSASSQIASSMGINPHTLQIMKAS
LFAEDDDGDMFLEQGGMKSSLDRASPRILLPGTQGRPSIGGLLQTRFSGAGLFPQLPDVP
FGGGLPGRLSLSRPSAVVPEPSRLSPWPSLGPSFLLPAPAAEATVRTVGARRLGGPVAPE
NSVTLGKGRLLMDAALFTGRSFRVGWGPGWTLVHCGDRLSGAGDKEQDQGDSGAGGFGFL
PKHAKSKRLSDSPFKVVIEQVVGLEPRDSEESQAVYQRPLEIGLKHSTISTEGACPFIQP
QSGVAALHEYVEWITDLSQEAGAGDGVLAHWALVWTLCEALWGRLGTTEPEPGTSGYLQQ
LERRRSFSAWLSHSATQRIEQEVGLSHGGGHVEAIFSYLTGHRISDACRLAQKSGDHRLS
LLLSQAVGSQYGRELLALQLGDWNRMQTDSFLQEERLRIFALLAGKPVWQSTDCVVNVCS
ELDWKRCVAVHLWYMLPPTASIADALAKYEAAFQGSAEGQKYACAPLPPYLDQSFPLDME
EEESKRPLYDICFHLLKLYSDRHYSLQELLDPLTVTWERLDYRLSWHLWSVLQALHYTHL
SPARQGLIHTSYAAQLESAGLWDMAIYVLLHISEDMLRERAVREMLQLHCPLLETEESAQ
KERFLTERLLIPEQWLHLAKATRARRETDRHREALHLYRAGHWNLCHRLVIQHLASDCII
NDNHEYLLEFLEGLAVPERCAVIQDWDTAGRVYLDYIRVIQTLHAIQQMDSAGYKLERLH
TEVTSLCSRIELLPCSTAKDRLAQSEMAKRVANILRVVLSLQQGGEGGEIPLSQLAPHIG
RLPMPEDYALEELRSLTQSYLRQLIVS
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggtgctcctttcgggggagggaccggaggatttggaacttca
tccacatttggacaacaaaacactggctttggggcgacgacaggtggcttcggggcctca
gcatttggggcgaccaacaacactggaggactctttggtgcgacgcagaataaaccagtg
gtgacagccaatcctcaacaaatccacactggtgcaggtagaggaggtggcctgtttggt
tccagtacgttcagccagcccgtaacgtcgtccaccagtagcggctttgggtttggcacg
gccagcggcacgtccactagcctgttcggcagcaccaacacgggcggcggtggaggactc
ttctcccagcagagcaatgctttcggagccgccaaaccagcctcctttggcacgtttggc
acgagcacggccaacaccggggggctgtttggggcgaccaactccaaccccttcggaggg
gcgtctgcctccctgttcggagcttcagggttcacccagcaagccgctcagccaggcacc
actgtcaagttcaaccctgcaacaggaagtgacaccatggtgaaagggggtgtgaccacg
agcattaacaccaagcaccagtgcatcacggccatgaaggagtacgagaacaagtccctg
gaggagctgaggttggaggactaccaggcaggaaggaagggccccactaaccccatggct
gcaccaacggggggtctctttggggctgcggccgcagccacccccagtacgggggctgca
gggctgtttggctcctcggccaccaacacaggcttttccttcggccaggccaaaaccaac
ttcggcaccagtactggtgggtttggtacagccacaggcagtctgtttggccagcagcaa
cagccccagcaagcccagcaggcagccagcctgttcaagcccttcggtcaagccacaacc
acacccaacacaggattctccttcggcaacaccagcaccatgggccagccccaacaaacc
agcaccatggggggtctgtttgggagcaccgcggcgtctcaggcaggggggttgtttgga
aacacagctcagaccacaccagccactggctttgggacaggcaccggtctcttcggacaa
accaacaccgccttcgggaacgtcggcacacagcagagcttatttggtaataagacggca
gggtttggcgccaccaccaccagcgcctcatcgtttggcacaggcaccggcctctttggt
aacaaatccgccctcaccctcggaacaggcaccaacccatctaactttggttttggaccc
actgctgctggcggaagcctctttgggaacaagactgcagcaggaggactggggactgga
ctgggagccggctttggagcagcggtgggcactgggcagatgtctctgtttgggaataac
aagacactgggttccactctgggaacaataggagcgtttggaccgcagggattcagcaca
ggaaccagcactctgggcttcggagcacaacaacaacctgttgcgctgacggaccctaac
gcggcggcggcccagcaggcagtgctgcagcagcagatcaatgctctggcctactccccc
tttggtgactcccccctcttcagaaaccccctctctgaccccaaaaagaaggaggagcgt
ctaaagcccaccaatccggcggcccagaaggcgttgaccacgcccactcactacaagctg
acaccgcggcctgcgacacgtgtgcggcccaaagctcttacatcttcgggctcctccaag
tctcagctgtttgacgggctggatgatgacgagccttctctcaccaatggagccttcatg
cccaggaagagcatcaagaagctggtgctgaagaacctgaatggcagcagcctgtacagc
agcccaatcaacagagacacagatgacctggcatctccaccggagtaccccctcaacgga
ctcagtgccagtgtggacgaggatgattatgtgagggaggtggtggagggaggggctgag
gatgacctggagatcaacaagttctacacgaagcccagcctgcaggacaccatctcagag
ctcaatgcccatagggtgggggccaggggcaggaatggcctggaggtgagcagcgaggac
atatcgctgggagaggactccatacaggaggagcgagaagaggaggtgcaggaggttccc
ccacaccctgcaggtatcgttctgtgccgtgtgggctactataccatccccgccatggac
gagctggccaagatggtggacgagaacggcgtgtgtgttgtggagaacttcacagtgggc
agaaaaggttacggctcagtgtttttccatggcgaggtgaatgtgactgggctgaacctg
gatgagattgttcacttcagacgcaaagaggttatcgtctaccccgacgacaagaacaag
cctgctgagggggaggggctcaacaggcgagcggaggtgactctggatggggtgtggcct
aatgataagaccacttgtactcagataaagaaccctgagcgtctgtctgagatgaactac
gagggccgtctggagaacgcctcacgcaaacagggcgcccgcttccttgagtaccgcccc
gagaccggctcctgggtgtttgaagtggcccacttctctaagtatggcctgcaggactct
gatgaggatgaggaagtgcctctcaaagtggaccccaagaagctgaagacggccacaaca
cttcccccggggctgcagcagcctcctccctcccagcagcaggtggcgccacaggctcag
tccacggctgtgctggagctgctgagccgcatgtctgaggtggacagtgacatggctgac
attacccaggatgccccaggggagagcatgttggaggttggggagagtggcgtgggggag
gataagggcagtcggctgggcactgtgactcccacagaacacaaccctgtctctgcatcc
agtcagattgcctcctcgatgggaatcaaccctcacactctccagatcatgaaggcatct
ctttttgctgaggatgatgatggtgacatgttccttgagcagggagggatgaagagctct
ctagacagggcctctcctcgcatcctcctgcctggcactcagggcaggccctccatcggt
ggtctcttgcagactcgtttcagcggggcaggtctcttccctcagctccctgacgtgccc
tttggagggggccttcccgggaggctgtccctgtctcggccgtccgcggtggttcctgag
ccctcgcggctctccccctggccctcgctggggccctctttcctgctgccagccccagcg
gcagaggccactgtacggacggtgggggctcgacgcctggggggccctgtggccccagag
aactcagtcacactggggaagggccgtctgctgatggatgcagctcttttcacgggccgg
tctttccgggttggctggggtccaggctggactctggtccactgtggagacaggctgagt
ggggctggggacaaggagcaggaccagggagactcaggagctggaggttttggatttttg
cctaaacatgccaagagcaaacgactctcagacagtccgttcaaggtggtgatcgagcag
gtggttggtctggagccgcgggacagtgaggagagccaggcggtgtaccagcggcccctt
gagattggcctgaagcacagcaccatcagtacagagggggcctgccccttcatccagccc
cagagtggggtggccgccttgcacgagtacgtggagtggatcactgacctcagccaggag
gctggtgccggagacggggtcctggctcactgggctctggtgtggactctgtgtgaggcc
ctgtggggtcggctgggtacgacagagccagagcctggtaccagcggctacctgcagcag
ctggagaggaggaggagcttctcagcctggctgtcccacagcgccacccagaggatcgag
caggaggtgggcctgagccatgggggaggacatgtggaggccatcttcagctacctcact
ggacaccgcatcagtgacgcctgcaggctggctcagaagagtggggaccaccgcctctcc
ctgctgctgtcccaggcggtgggctctcagtacggccgggagctgctggcgctgcagctt
ggagattggaacagaatgcagacagactcatttctgcaggaggagaggctacgcatcttc
gccctgctcgccgggaaacctgtgtggcagtctacagactgtgtggtgaacgtgtgttca
gagctggactggaagcgttgcgtggcggttcacctgtggtacatgcttcctcccaccgcc
tccatcgctgacgccctggccaagtacgaagcagccttccagggctctgcagagggtcag
aagtacgcctgcgcccccctgcccccctaccttgaccaatcattcccgctggacatggag
gaagaagagtctaaacggccactctacgacatctgtttccacctgctcaaactatacagc
gacagacactatagcctgcaggagttgttggacccgctgacggtgacgtgggagcgtctg
gactaccgtctgagctggcacctgtggtcggtcctgcaggcgctgcactacacacacctg
agccccgcccgacagggcctcatacacaccagctacgctgcccagctggagagcgctggc
ctctgggacatggccatctatgtactgctgcacatatctgaggacatgctccgtgagcgt
gcggtgagggagatgctccaactgcactgccctttgctggagactgaggagtcggcccag
aaagagcgcttcctcacagaaagactactgatcccagaacagtggctccacctggccaaa
gctactagagccagaagagagacagacagacacagagaggccctgcacctgtacagagca
ggccactggaacctctgccacaggctggtcatacaacacctagcctcagattgtatcatt
aatgataaccatgagtacctgttggagttcttggaggggctggctgttccagagcgctgt
gctgtgatccaggactgggacacggcaggcagagtctacctggactacatcagagtcata
cagaccttacacgccatacagcagatggatagtgctggttataagctggaacgtctacac
accgaggtgacatcactctgcagcaggatagagctcctcccctgctccaccgccaaggac
cgcctcgcccaatcagagatggccaagcgcgtggctaacatcctgcgtgtggtgttgagt
ctgcagcagggtggtgagggtggcgagatccccttgtcccagctagcgccccacatcggc
cgtctgcccatgcctgaggactatgccctcgaggagctccgcagcctcacccaatcatac
ctgagacagctcattgtcagctaa
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