Oncorhynchus gorbuscha (pink salmon): 123998754
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Entry
123998754 CDS
T07892
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin C
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03320
PPAR signaling pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04137
Mitophagy - animal
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123998754 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123998754 (ubb)
04137 Mitophagy - animal
123998754 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
123998754 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123998754 (ubb)
Ubiquitin system [BR:
ogo04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123998754 (ubb)
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
123998754
NCBI-ProteinID:
XP_046159833
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All DBs
Position
LG16:complement(62086904..62090035)
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AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacaggcaagaccatcacccttgaggttgagccaagc
gacaccattgagaacgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatatttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aacgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
tttgccggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtgaagaccctg
acaggcaagaccatcacccttgaggttgagccaagcgacaccattgagaacgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaatatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtgaagaccctgacaggcaagacc
atcacccttgaggttgagccaagcgacaccattgagaacgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctctcagactacaatatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtgaagaccctgacaggcaagaccatcaccctcgag
gttgagccaagcgacaccattgagaacgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatctttgccggcaagcagctagaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctaatc
tttgccggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtgaagaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccattgagaacgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggaccttaa
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