Oncorhynchus gorbuscha (pink salmon): 123998762
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Entry
123998762 CDS
T07892
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420
Nucleotide excision repair
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123998762 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
123998762 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ogo03051
]
123998762 (rad23ab)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123998762 (rad23ab)
Proteasome [BR:
ogo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123998762 (rad23ab)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123998762 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Ubiquitin_2
Rad60-SLD_2
UBA_2
CUE
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
123998762
NCBI-ProteinID:
XP_046159852
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All DBs
Position
LG02:19941540..19954019
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AA seq
457 aa
AA seq
DB search
MLSITLKTLQQQTFKIEIDPELTVKSLKEKIETEKGKDGYPATGQKLIYAGKILNDDIPL
KDYRIDENNFLVVMVTKPKPPATPQIAPLAAPASTPAPAPAPPAVSGLSLSDIARPTSSP
APMEISTLSPTSTPAPASSLTQAMEFFTPPAPAPASIPPAALGTSAAPAAAASSHSEVKP
EGEHPEQPFATPPALSSSSLVDDLSLLEEAASILVTGQAYENLVSEIMSMGYEREQVIAA
LRASYNNPDRAVEYLLMGIPAEADLLPPEAFLHTALANLNPTAPAPATDRAQPPPAATTG
AVSSTQQPLSPGGLTGGLTGGTGGSTGDENPLEFLRNQPQFQQMRQVIQQNPALLPALLQ
QLGRDNPQLLQQITQHQERFVQMLNEPQGGEMVEEGVQSQGAPQTNYIQVTPQEKEAIER
LKALGFPEGLVIQAYFACEKNENLAANFLLQQTFDDE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgataacgttgaagactcttcagcagcaaacgtttaaaatagaaatagatcca
gaactaacggtaaaatccctgaaggagaagattgagactgaaaaagggaaggatggctat
ccagccacagggcaaaagttaatctacgcaggcaaaatcttgaatgatgacatacctcta
aaagactacagaattgatgagaacaactttctggtggtcatggttacaaagcccaaacct
ccagctactccacagattgctcccctggcagccccagcctctacccctgctcctgcccct
gcacctcctgctgtttctgggctgtccctctctgacattgcccgacctacctcatcccct
gcccccatggagatctccaccctgtcccctacatccacacctgcccctgcctcaagcctc
acacaagcaatggagttcttcacaccccctgcaccagcccctgcttctattccccctgca
gccctggggacgagtgcagccccagctgcagcagcatcctcccactcagaggtcaagcct
gagggggagcaccctgaacagccctttgctacaccaccagccctctcctcctccagcctt
gttgatgacttaagtctcctggaagaagcagcgtcaatactggtgacaggacaggcatat
gagaatctagtgtctgaaatcatgtctatgggatatgaaagggagcaggttattgcagcg
ctgcgagccagttacaacaacccagacagagccgtggagtatctgctaatggggattcca
gccgaggctgaccttcttccaccggaggcgttcctacacacagctctggccaacctcaac
cccactgcccctgctccagccacagatagagcccagcccccgccagcagccacaacaggc
gcagtgtcttcaacccagcagcccctctcacctggtgggctgactggtgggcttactggt
ggtactggtggaagtactggggatgagaaccccctggagtttttgaggaaccagccacag
ttccagcagatgagacaggtcatccagcagaacccagctctccttcctgccctgctccag
cagctaggcagagacaacccccagctgctgcagcaaattacccagcaccaggagcggttt
gtgcagatgctgaacgagccccaaggaggagagatggtagaggagggagttcagtcccag
ggggcgccacagactaactacatccaggtcactccacaagagaaggaggccatcgagagg
ttaaaagccttgggatttccagagggacttgtcattcaagcatatttcgcatgtgagaag
aacgagaatttagctgctaatttcctgctccaacaaacatttgatgacgagtga
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