Oncorhynchus gorbuscha (pink salmon): 123998783
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Entry
123998783 CDS
T07892
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123998783
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123998783
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
123998783
NCBI-ProteinID:
XP_046159873
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All DBs
Position
LG16:complement(38935506..39082799)
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AA seq
620 aa
AA seq
DB search
MFGIQESIQRSGSSLKEEPIGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFLGFVEKEKESTGEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAAAPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRNHN
QLSGLGNSSVHAGMMGVNSFPGQLAVNVSESSQGANQGEGAGRYGCGAIVIETGFSRNTS
SVSPHGYVPSSTPQQTNYSSVTTSMNGYGNTVMSNLGGSPSFLNGSAANSPYAIVPSSPN
MASSTSLPSNCSSSSGIFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNGLQDQ
SFVDSSKYSTASSLQGLAFS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggagagcatccagaggagtgggagtagtttgaaagaggaacccatc
ggatccggtatgaacgcagttcggacatggatgcagggagccggggtgttggatgcgaac
accgccgctcaaagtggagtgggtcttgcccgggctcactttgagaagcaaccgccgtca
aatcttcggaaatccaatttctttcacttcgttttggctctatatgacagacaaggacaa
ccagtggaaatcgaaaggacgtctttcctcggttttgtcgagaaggaaaaggaatccact
ggagaaaagaccaacaatggtatacactacagactgcaacttctctacagtaatggcatc
aggacagagcaggacttttatgtgcgactcatcgactccatgactaaacaggccattatt
tatgaaggtcaagacaagaacccagagatgtgccgagtgttactgacacacgagatcatg
tgcagccgctgctgtgacaagaagagctgtggcaaccgcaacgagaccccgtctgaccca
gtcatcatcgacaggttcttcctgaagttcttcctgaaatgcaaccagaactgtctgaag
aatgcagggaacccgcgggacatgcgccgcttccaggtggtggtgtctactacggtcagt
gtggatggacatgtcctggcggtctctgacaacatgtttgtccacaacaactccaaacac
ggccgccgggctcgtaggctggacccctcggaaggtacgccatcatacctggaacatgca
gctgccccctgcatcaaagctatcagccccagtgagggctggacaacagggggcgcaact
gtcatcatcataggggacaacttctttgacggcctacaggtcatctttggcaccatgctg
gtctggagtgagctcatcacaccccatgccatccgggtgcagactccgccccgccacatc
ccaggggtggtagaggtgaccctctcctacaagtccaagcagttctgtaaaggcacgccc
ggacgcttcatctacacagctctgaatgagcccaccatcgactacggctttcagcggctg
cagaaggtcatcccccgacaccctggagatccagaacgccttccaaaggaggtgattctg
aagagggcagcagaccttgtggaggctttgtatgggatgccccacaacaaccaggagatt
attctgaagcgggcggcggacatagcagaggctctctacaatgttcccaggaaccacaac
caactgagcggcctgggcaatagctccgtccacgcaggcatgatgggggtcaactccttc
cctggccagctggccgtcaatgtgtccgagtcctcccagggagccaatcagggtgagggg
gcgggtcgatacgggtgtggcgctatcgtcatagaaaccggtttcagtcggaacacgagc
agcgtgtctccacatggctatgtgcccagctccaccccccagcagactaactacagctct
gtgaccaccagcatgaacggctacggcaacactgtcatgtccaacctgggaggatccccc
agcttcctcaacggcagcgctgccaactcgccctacgccatcgttccctccagccccaac
atggcgtcctccaccagcctgccctctaactgtagcagctcttctgggatcttttccttc
tcccctgccaacatggtgtcggccgtcaagcagaagagcgccttcgctcccgtggtgcga
ccccagacctcacccccgcccacctgcaccagcaccaatggcaacggtctccaagatcag
tcttttgtggactctagcaagtactccacagccagctcgctgcagggcctggccttctcc
tga
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