Oncorhynchus gorbuscha (pink salmon): 123998789
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Entry
123998789 CDS
T07892
Name
(RefSeq) vacuolar protein sorting-associated protein 26B-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123998789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123998789
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
123998789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_C
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
123998789
NCBI-ProteinID:
XP_046159894
LinkDB
All DBs
Position
LG16:complement(54773667..54802644)
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AA seq
332 aa
AA seq
DB search
MSFFSFGQSAQIDIVLNDAETRKKAEHKTEDGKKDQYFLFYDGDTVSGKVNLTLKNPGKR
LEHQGIKIEFIGKIELYYDRGNNYEFVSLVKDLAQPGELTQSRTFDFEFTNVEKPYEAYT
GQNVKLRYFLRVTVSRRLNNISKEMDIVVHTLSMFPDLNSSIKMEVGIEDCLHIEFEYNK
SKYHLKDVIVGKIYFLLVRIKIRHMEINIIKRETTGTGTNVYHENDTIAKYEIMDGAPVR
GESIPIRLFLAGYEITPTMRDINKKYSVRYYLNLVLIDEEERRYFKQQEITLWRRGDVVR
KSMSLQAAIASQRFECSSSDEKALAHAQDKKP
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttttagttttggtcaaagtgcacaaatcgatatagttttgaatgacgctgag
acaagaaagaaagccgaacataagaccgaagatgggaaaaaggaccaatattttctgttt
tatgatggcgatacagtatctggaaaagtcaacttaacactgaagaatccagggaaaaga
ctcgagcatcaaggcatcaaaatcgagtttattgggaaaattgagctgtactacgacagg
ggaaacaactatgagtttgtatctctggttaaagacttggcccaaccgggagagctaacg
cagtcccggaccttcgactttgagttcacaaatgtggagaaaccatacgaggcctacacg
ggacagaatgtcaaattacgctactttctgcgggtaactgtaagccggagactgaacaac
atcagtaaagaaatggacattgttgtgcacacgctcagtatgttcccagacctcaactct
tctatcaagatggaagtgggaatcgaagactgcctgcacatcgagtttgagtacaacaag
tctaagtaccacctaaaagatgtcatcgtggggaagatttacttcctgttggtacggatc
aagatcagacacatggagattaatatcatcaagcgagagacgactggcacgggcacaaac
gtgtaccatgagaacgacaccatagccaagtacgagattatggatggagcaccagtgaga
ggggagtccatccctattcgactttttctggctggctatgagatcactcctacgatgagg
gacatcaacaagaagtactctgtgcggtactacctcaatctggtgctcatagacgaggag
gagaggcgttacttcaaacagcaggagataactctgtggaggaggggggacgtagtgagg
aagagcatgtccctccaagcggccatcgcctcacagcgcttcgagtgctcgtccagtgac
gagaaagccctagctcatgcccaggataagaaaccgtag
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