Oncorhynchus gorbuscha (pink salmon): 123998907
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Entry
123998907 CDS
T07892
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123998907
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123998907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
123998907
NCBI-ProteinID:
XP_046160088
LinkDB
All DBs
Position
LG16:complement(5676244..5702904)
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AA seq
2138 aa
AA seq
DB search
MEPGPPGSSQYLDQNMLAHSQSQCHQPHQASAPVYTSPHHQPHPANPGQSPLMYPQSHLH
YPQHPSSPSPSSSSYMEKGGYRPPPQNSYSYQQTPSRGGYEPQPPLQGIPTPQETHPKYQ
HFSQPQQNYCLSELSVRSPEQYYQTCSPASSHSPARSVGRSPSYSSTPSPLMTNPESFQY
SQPPMTPGAASSSSSSSAGLQDQGLLMPPRSHPSSSPNVAHPTPQHSYTQGVSMKERFSE
KLLANPSLWSLNALTSQVENISNNVQQLLLSEAMVANKKGAKRSSIGSSGGSSSKKEEVY
KGVPGGPEGQHGGGPMQDPYSTNQHQLVPMEMQEGGYSSSSDEQLERGYYYCGQGRSPAQ
APNNTHLGLDTASSCSMTSPDDMSTRSGDSVSGLQSVASRDNMTPDPRSQGGHEPRQTPM
KSVGDERSPVSVTIPSPMKQESQSPPDIQRLGLPLKENFEELAWTEKIADYEDVGVKKTS
DSESDRRASDNVTDTSEKREKWPEDEKGPALYSKINKAVTEGKSYCYDENMYHKIQNKHD
RGKGDSADKSPSLSDSSHKGDLGQEIKSEAFKSESPTDSESSVKTSPYISRGDLDQDQYL
TEKEDSSENTSPTPRGEALDQRLSASEKRESREEEEEDEEGEEERNQKSMSSPLSAEERE
GEESESLPSTEKDLNNRTSPQEEPSGELCSRTEGQILAEPQPYSNTESAEPESQAAQPDA
TAAAAESPESGSAICDTPPQSHSAMMVFSALSEIATPPAPSHTRDHIDHSDSNVLEPDSP
QLPGKSILHSSPSWANTPPSPKKGDEDMEPGISCPSAVTPSAKPEPVAPSAHPQAFGRKH
SRGRRRLMHSGVEFRRQLSVEREGESAPSPPQKPCMPSSKSALFSDQLDMAAHQDIITTS
ETPKLLVEGTRSRMCTRSFNAQDTPPKDPQPPERPKPGRKPGSKPGPKPGPKSGLKPGPK
PGLKPGPKPGSKPSLKPGPKPGLKPDSKPSPKPGLKPGPKPGPKTVLKPGPKTGPKPGPK
PGPKPTEGAPRGRPRGTGSKSKLAEQEGPIQPITGGPGRGQKSLSINSQQGDGKQEVKAP
GKDGKNMVLRSRKPPQDKLPKEKEKAQSEGILTQTLTGITKPNAVLQNEERMSIEPAIPV
FPNQTDTSITDTSVTDSSKPDTSVTDVSVTDTSKPDTSVTDTSVTDTSVTDTSKPDTSVT
DTSVTDTSVTDTSKPDTSVTDVSVTDTSKPDTSVTDVSVTDTSKPDTSVTDTSVTDTSKP
DTSVTDTSVTDTRVTDTSVSDPNVTDTSVTDTRVTDTRVTDTSVSDPNVTDTSVTDTSVT
DTRVTDTSVSDPNVTDTSVTDNSVTDISIPVAPPEKLKEPAVAVPLETAPVPPLKRKPSP
LPLEPPVKKKRGPKPKPKLQQPQPETPHSDQANQPPLVKPKEMGVRGPKRRLKRGRHIKA
SLITVLTKDNPPPTMADGDVVSEMPSVPSQCPTKTKYLPPRKGRGLKYEAMVQKINSGTG
SKKHPPTPQPESTEATVDEVTSKPVSLPVSVESEAPVAAVSAPDVSREELARDVGSSTGA
QNTEQERRVQQNTGEGVQPEPLPSGVPDAAAASGANKPTRTKRRKWAMVESTDATVVAME
TGSLIINTPRLAKQRAIKNNHEMHLKQRRRKRKGGQPSEGPVADEEVETTTAEQQTETPT
DTALTTTLALPAGPGEITDRPQVITTEMIQPPPSKRGRKPSSSPSKKRGRAPGEQQSSKP
LRVHKKPGPKKGIKDAMEVIEAVVKAAGREARLKKKKWKKESPAVSEEKQPEPSLKQVLS
KTPKSRIKHSFCPYVRMDSSRDFTSLCTIVNRRDEEMKMVLQKPRKKSPDKIKNPVTVAK
AITSSLAMLQGPLVNKTLIDRCLTCCLCGKPANYRELGDLCGPYFPEDSIPRKILSARHI
ETQRENREKISSNSSIREPSSSTPTSEGDPGFKKEVSKKVDMETVTKEGSSSSGGSYHHQ
PHPHHWRPRRAERAPAEGGSTHRPTLRDRFRRMQKLQGERRAAEATAGGQEGGNGGGGLL
QRLQGEAEAKEHWAHENCAIWTNGIIMVAGRLYGLKEAVHTSTETSCSKCQRVGASISCC
WKGCPNKYHYMCAKEIGCMFQDDNFSLKCPKHKTDRQG
NT seq
6417 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggtccccctgggtcctcccagtatctggaccagaacatgctggctcactcc
cagagccagtgtcaccagccccaccaggcctctgctccggtctacaccagcccacaccac
cagccccatcccgcaaacccaggccagtccccgttgatgtacccccagagccacctccac
tacccccaacacccctcgtccccctcgccttcctcctcctcctacatggagaagggggga
taccgcccgccaccccagaacagttacagctaccaacagactccctccaggggtggctac
gagccccagcccccactacaaggcattcccactccccaggagacccaccccaaataccaa
cacttcagccagccccagcagaactactgtctgtccgagctgtctgtcagatcccctgag
cagtactaccagacatgtagtcccgcctccagccactcccctgcacgctctgtaggccgc
tcgccctcctacagctccaccccttcccctttgatgaccaatccagagagcttccagtac
agccagccaccaatgaccccaggggcggcttcttcgtcctcctcttcctcagcgggtctg
caggaccagggcttgctgatgccgccgcgctcccacccgtcctcgtcccccaacgtggcc
cacccaaccccgcagcacagctacacacagggggtttccatgaaggagcgcttctctgag
aagctgcttgccaaccccagcctgtggagcctgaatgccctcacctctcaggtggagaac
atctccaacaatgtgcagcagctgctgctctccgaggccatggtcgccaacaagaagggg
gccaagcgcagcagcattgggagcagtggaggcagctcctccaagaaggaagaggtttac
aaaggagtgccaggaggccccgagggtcagcacggtgggggtcccatgcaggacccctac
agcaccaaccagcaccagctcgtccccatggagatgcaggagggggggtactccagtagt
tctgacgagcagctggagagggggtactactactgcggccagggcaggagcccagctcag
gcccccaacaacacacacttgggcctggacacggcctcatcctgctccatgacctctccg
gatgacatgtccacccggtctggcgactctgtgtccggcctgcagagcgtggcttccagg
gacaacatgacccctgaccccaggtcacaggggggacacgaaccccgacaaacccccatg
aagagtgtgggggatgagaggtcccccgtgagtgtgacaattcccagccccatgaagcag
gagagccagtcccctccagacatccaacgtcttggcttgccactgaaggaaaactttgag
gagttggcctggacagagaaaatagcagactacgaggatgtaggcgtgaaaaagacctcc
gacagcgagagtgaccgcagagccagcgataatgtcacagatacctctgagaagcgggag
aaatggccagaggacgagaaaggcccagcactgtatagcaagatcaacaaagcagtgacc
gagggaaagagctactgctacgacgagaacatgtaccacaagatacaaaacaaacatgac
cgaggcaaaggggactcggcagataagtccccaagcctctcagactccagccacaaggga
gacctgggccaggagattaaatcggaggccttcaaatccgaatctcccactgactctgag
agctcagtgaagacatccccctatatttccaggggtgaccttgaccaagatcaatattta
acagagaaggaagacagctcggagaacacatcccctaccccgcggggcgaggctttggac
cagaggctctccgcctcagagaagagagagagcagagaggaagaggaggaggatgaggag
ggggaggaggagagaaaccagaagtccatgtcttctcctctttctgctgaggagagagag
ggagaagagagtgagagcctgccatcaactgagaaggacctcaacaatagaacgagccca
caggaggagccttctggagaactgtgcagcagaacagaaggccagatcctggctgagcct
cagccttacagtaacacagagtctgcagagccagaaagccaagcagcacaaccggatgca
acagcagcagcagcagaatccccagaaagtgggtcagccatttgtgacactccaccccag
tctcactcagccatgatggttttctcagctctcagcgagatagcaacacctccagctccg
tctcacaccagggaccatattgatcacagcgattccaacgtgctggagcctgactcccct
cagctgccggggaagtccatactgcactcatcgccctcctgggccaacaccccaccctcg
ccaaagaaaggcgatgaggacatggagccgggcatcagctgcccaagcgctgtgaccccc
tcagccaagccagaacccgtggccccatctgcacacccgcaggctttcggccggaagcac
agccgaggcaggaggagactgatgcactcaggtgtggaattcaggagacagctgagtgtg
gagagagagggggagagtgccccctcgccaccgcagaaaccctgcatgccctccagcaag
agtgctctgttctccgatcagctagacatggccgctcaccaggacataatcacaacgagc
gagacacccaaactgcttgttgagggcacccgctccagaatgtgcactcgctcattcaac
gcgcaggacactcctcctaaggatccccagccccctgaaagaccgaaaccagggcggaaa
ccaggttcgaaaccaggcccaaaaccaggcccgaagtcagggttaaaaccagggcctaag
ccaggactaaaaccagggccaaaaccaggttcaaagccaagtcttaaaccaggaccaaaa
ccaggtttgaaacccgattcgaagcccagcccaaaaccaggtttaaaacctgggcctaaa
ccaggcccaaaaacagttctaaaaccagggcctaaaacaggtccaaaaccaggaccaaaa
cctggtccaaaaccaactgaaggagcaccccgtggtcgtcccaggggtacgggctctaag
tcgaagttggcagaacaggaaggtcccattcaacccataacagggggtccaggaagaggc
cagaagagcttgagcatcaacagtcagcaaggtgatgggaaacaggaagtgaaagctcca
ggtaaggacggaaagaacatggtcctgagatccagaaagcccccccaggataagcttcca
aaggaaaaagagaaggcgcaatcagagggaatcctgactcaaaccctgacaggtataaca
aagcccaatgcagtattacaaaatgaggaacgtatgagcatagagccagccatccctgtc
tttcctaaccagacagacacaagtataacagacaccagtgtaacagactccagtaaacca
gacaccagtgtaacagacgtcagtgtaacagacaccagtaaaccagacaccagtgtaaca
gacaccagtgtaacagacaccagtgtaacagacaccagtaaaccagacaccagtgtaaca
gacaccagtgtaacagacaccagtgtaacagacaccagtaaaccagacaccagtgtaaca
gacgtcagtgtaacagacaccagtaaaccagacaccagtgtaacagacgtcagtgtaaca
gacaccagtaaaccagacaccagtgtaacagacaccagtgtaacagacaccagtaaacca
gacaccagtgtaacagacaccagtgtaacagacaccagagtaacagacactagtgtatca
gatcccaatgtaacagataccagtgtaacagacaccagagtaacagacaccagagtaacc
gacactagtgtatcagatcccaatgtaacagacaccagtgtaacagacaccagtgtaaca
gacaccagagtaacagacactagtgtatcagatcccaatgtaacagataccagtgtaaca
gacaacagtgtaacagacattagtatacctgttgctccacctgagaaacttaaagaaccg
gctgtagctgtacctcttgaaactgcacctgtacctccactcaaaagaaaacccagtcct
ctgcctctagagcctccggtgaagaaaaagcgaggtccaaaaccaaaaccaaaactacaa
cagccccagcctgaaactccccattctgaccaggccaaccagcctccattagtcaaaccc
aaggagatgggtgtccgagggcccaagagaaggctaaagagaggcagacacatcaaggcc
tctctgatcactgtgctgaccaaagataaccctcctcccactatggctgacggtgatgtg
gttagtgaaatgcccagtgtcccttctcagtgtcccactaaaaccaagtacctccccccg
cgcaaaggcaggggtctgaaatacgaggccatggttcagaaaataaactcgggcaccggt
tcgaagaaacacccgccaacaccacagcccgagagcacagaggcgacagtagatgaagtg
acgtcaaagcctgtgtcgctgcccgtctcggtggagagcgaggccccagtggcggcggtg
agcgcccctgatgtgtcacgggaggagttagcaagggacgtggggagctccacgggggcc
cagaacacagaacaggagagaagggtgcagcagaacaccggggagggggtgcagcctgag
ccactcccatcaggggtgccagacgctgcagcggcgagcggcgccaacaaacccaccagg
accaagaggaggaaatgggccatggtagagagcacggacgccacggtggtcgccatggag
acggggagcctgatcatcaacacgccgcggctggccaagcagagggccatcaaaaacaac
cacgagatgcacctgaaacagaggaggaggaagaggaaaggaggacagccttcagagggg
cctgtggctgatgaggaggtagagacaacaacagcagaacagcagacagagacacccact
gacacagcgttaacaacaacgctcgctctaccagccggcccaggtgagatcacagacagg
ccgcaggtgatcaccacagaaatgatccagccgcctccctccaaacgagggaggaagccc
tcttcatccccctccaaaaagagagggagagcaccaggtgaacagcagagcagcaaacct
ctgagggttcacaaaaaacctggtcctaaaaagggaatcaaagacgccatggaggtgatt
gaagcggtggtaaaggctgcagggagggaggccagactcaagaagaagaaatggaaaaag
gaaagccctgcagtgtcagaggaaaagcagccagagccctctctcaaacaggtactgagt
aagactcctaaaagcagaatcaaacactccttctgtccatatgtgcgtatggacagctcc
agagacttcacctctctctgtaccatcgtcaacaggcgcgatgaagagatgaagatggtg
cttcagaagccccggaaaaagagcccggacaaaattaaaaacccagtcacagttgccaag
gcgataaccagctccttagctatgctccaggggcccttggttaacaaaacgttaattgac
aggtgtctaacgtgttgcctgtgtggaaagccagcaaattaccgtgagctgggggatttg
tgtgggccctacttcccagaggatagcatcccccgcaaaatcctgtcagcaagacatata
gaaacccagagggaaaaccgagagaaaataagctccaacagtagcatcagggaaccaagc
agcagcaccccaacaagcgaaggagaccccggcttcaaaaaggaagttagtaaaaaggtg
gatatggagacagtcacaaaggagggcagtagtagtagtggtgggagttatcatcatcag
ccccacccccaccattggcgccccaggagggcagagagggcaccagcggagggcggaagc
acgcaccggcccaccttacgggatcggttcaggaggatgcagaagctccagggggagagg
agggctgcggaggccacagctggtggtcaggaagggggcaatggagggggaggcctcctt
cagagactgcagggggaggctgaggctaaggaacactgggcccatgagaactgtgctatc
tggaccaatgggatcatcatggtggccgggaggctgtacggcctgaaagaggctgttcac
acctctacagaaacaagctgttccaagtgccagagagtgggcgcgtccatcagctgctgc
tggaaaggctgccctaacaaataccactacatgtgcgccaaggagataggctgcatgttc
caagacgacaacttttcactgaaatgtccgaaacacaagactgacagacaagggtga
DBGET
integrated database retrieval system