Oncorhynchus gorbuscha (pink salmon): 123999056
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Entry
123999056 CDS
T07892
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04310
Wnt signaling pathway
ogo04520
Adherens junction
ogo04916
Melanogenesis
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123999056
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123999056
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
123999056
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123999056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123999056
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
123999056
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123999056
NCBI-ProteinID:
XP_046160358
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All DBs
Position
LG16:43453759..43522779
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AA seq
511 aa
AA seq
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MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDGVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSMSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPQGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHSTGIPHPAI
VPPSGKQDHHDHYDRNVYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYEAGLREGAGEK
NKADWGKKKRRKREKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWC
ASPTSSDGSAIDSPPSPVDGVPPQHPSLPSSPSPASPSHIPLHPQPSKQHTPRILSKPKT
TELSLKALIESSQQHDNLNHHHHDCTLPKSH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagcggcggaggagatgatctcggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgatcaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatccgagacgaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catctcgacggcgtttccaaacatcaagatggagggatgtacaaaacagcgtatccgggg
tacccgtttctcatgctgcctgacccatacatccccaacggatccatgtccccatcttcc
aacaaagtttcggtggtccagcagtctcacgggatgcaccccctgacgtccctgttgccg
tacagcaatgaccacttcaaccccagcccccctcacctgcccacagacatgagccagaaa
ggcgttcacaggccccagtcccaggacatctcaggcttctactccctacctcagggcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctagggccaggcatgcactcaacagggatcccccatccagccatc
gtgccaccttcaggcaaacaggaccatcatgaccattacgacaggaacgtgtacgctaag
ccacaccaggagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacgctg
aaggagagcgctgccatcaaccagatacttggcagaaggtggcacgctctgacccgggag
gaacaggctaaatactatgagctggccaggaaggagcggcagctacacatgcagctctac
cccagctggtccgccagagacaactacgaggcgggccttagagagggcgcgggggaaaag
aataaagctgattggggcaagaagaagagaagaaaaagagagaagcagcaggactccacc
acagaccctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggac
tggtgtggtccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgc
gccagccccacttcttccgatggaagcgctatagactcgcccccctcccccgtcgacggc
gtcccccctcagcacccctccctgcccagctcgccctcgcctgcttccccctcacacatc
cctctgcacccccagcccagcaaacaacacacaccccgtatcctctcaaaacccaagacc
acagaactctctctcaaagctttaatagaatcatcccaacagcacgacaatctcaatcat
catcatcatgactgtaccctgcccaagtctcactag
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