KEGG   Oncorhynchus gorbuscha (pink salmon): 123999096
Entry
123999096         CDS       T07892                                 
Symbol
polr2eb
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03020  RNA polymerase
ogo03420  Nucleotide excision repair
ogo04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123999096 (polr2eb)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123999096 (polr2eb)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    123999096 (polr2eb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogo03021]
    123999096 (polr2eb)
   03400 DNA repair and recombination proteins [BR:ogo03400]
    123999096 (polr2eb)
Transcription machinery [BR:ogo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     123999096 (polr2eb)
  RNA polymerase III system
   RNA polymerase III
     123999096 (polr2eb)
  RNA polymerase I system
   RNA polymerase I
     123999096 (polr2eb)
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123999096 (polr2eb)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N
Other DBs
NCBI-GeneID: 123999096
NCBI-ProteinID: XP_046160457
LinkDB
Position
LG02:21281143..21283295
AA seq 210 aa
MDDDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEELSELLLRYKLKESQLPRIQQGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgatgaagaaacatataggctatggaaaattcggaaaaccatcatgcagctg
tgtcatgacagaggctacctggtgacccaagatgagttggaccagaccttggatgagttt
aaaagtcagtttggggacaaacccagcgagggtcgcccacgacggacagatctcactgtc
ctggtagcacacaatgatgaccccacagaccagatgtttgttttctttcctgaggagcct
aaagttggtattaagaccatcaagatgtactgccagcggatgcaggaggaaaacatcaca
cgtgcctgcattgtagttcagatgggaatgacaccttcagctaagcagtctctagttgat
atggcccccaaatacatcctggaacagtttctgcagcaggagcttctaataaacatcact
gagcatgagctagttcctgaacacatagtcatgacgaaagaggaactgtctgaattgctg
ttacgatataaactgaaggagagccagctgcctaggatccaacaaggagatcctgtagcc
cggtactttggattgaaaagaggccaggtagtaaagataatcagacccagtgagactgct
ggacgatacatcacctacaggctggtccagtga

DBGET integrated database retrieval system