Oncorhynchus gorbuscha (pink salmon): 123999098
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Entry
123999098 CDS
T07892
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123999098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123999098
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
123999098
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
123999098
NCBI-ProteinID:
XP_046160465
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All DBs
Position
LG16:76888968..77033887
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AA seq
688 aa
AA seq
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MNSNYSVSLGGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSVGDVVLSIDGIATN
GMNHLEAQNKIKACTDNLNLTLQKASSVPKADTPKDEPLEIIKPVPITHPAPPFTSPSPQ
PGAAYNKTARPFGGGSSVGAVTSSLTAPKVASIPSASSAFTPAAPSSQQPQPPFPLASRS
PAPPSTAPPPRPDSGRSPFTTPSSTSSSSASSSPARVTAPSSQQPQPPFPLASRSRSPAP
PSTAPPPRPDSGRSSFTTPSSTPSSSASSSPARVTAPSSNPGAPQSSCYNTPINLYSNAN
ACEVAIGQRRGLLEAQGVVVDQIKEQFNGVPPKTGPRRNRVEPDLTHASPLSEASKKRLI
EDTEDWHPRTGTSQSRSFRILAQITGTEKDQAQENSAGKNKVVENAQPSGHITTSVKTMT
KVPGAPRNGSSVPPPTSKTPSAQVKPSWPAGGSTGFSKGGAAPSFGRVSNTAPVPTVPKV
SDRPAPQAHPKDQNSLVQRAEHITAGTRTPMCGHCDKVIRGPFLVAMGMSWHPEEFNCSH
CHMSLVESGFVEERGTVYCAHCYEKFFAPTCTSCKQKVLGEVINALKQTWHVYCFLCASC
QQPIGNNTFHLEDGLPYCERDYYQLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCAV
CNTSLEGQAFFSKKDKALCKKHANTVQI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaactacagcgtctccctgggtggccccgccccctggggcttcagactgcag
ggaggaaaggacttctgtctgcccctcactatctcacggctgaccgatgggggcaaagca
gccaaagccaaaatgagtgtgggagatgtagttctgtctatcgacggaatcgccaccaac
ggcatgaaccacctggaggcccagaacaagatcaaagcctgcactgacaacctcaacctc
accctgcagaaagcttccagtgttcccaaggctgatacaccaaaggacgagccactggag
atcattaagcctgtgccaatcacccatccagcgccgcccttcaccagcccctccccccaa
cccggtgctgcctacaacaagacggcccgcccctttggcgggggcagcagtgtgggtgca
gtcacttcctccctgaccgccccaaaggtggcctccatcccctctgcatcgtctgctttc
acccccgccgccccctcctcccagcagccccagcctcccttcccactagctagccgctcc
ccagccccaccaagcacggccccaccccccagacccgactctggccgttcccccttcacc
accccctcctccacttcctcctcttctgcctcatcctccccggccagagtgacagccccc
tcctcccagcagccccagcctcccttcccactagctagccgctcccgctccccagcccca
ccaagcacggccccaccccccagacccgactctggccgttcctccttcaccaccccctcc
tccactccctcctcttctgcctcatcctccccggccagagtgacagccccctcctccaat
cccggtgctccgcagtcctcttgctataacacgccaataaacctgtactccaatgccaat
gcctgtgaggtggccataggacagaggcggggcctgttggaagcccagggtgtggtggtc
gaccagatcaaagaacagtttaatggagtccccccaaagactggccctaggaggaacaga
gttgaaccagacttgacccacgcctcgcccctcagcgaggccagtaagaagcgtctgatc
gaggacacagaggactggcatcctcgcaccggaacctcccaatccaggtccttcagaatc
ctggctcagatcaccggcacagagaaagaccaagcccaggagaacagcgctggaaagaat
aaagttgttgagaatgcccagcccagtggccacatcacaacatcagtgaagaccatgacc
aaagtcccaggagcccccaggaatggcagcagtgtcccgccacccacctccaagaccccg
tctgcccaggtcaaaccctcctggccagctggaggctcaacaggtttctctaagggtggc
gctgcgccctcttttgggagggtcagcaacactgcaccagtacccacagtacccaaagtt
tctgaccgccctgccccccaggcgcaccctaaggatcagaactccctggtacagcgggcc
gaacacatcacagcgggaacacgcacgcccatgtgtggccactgtgacaaggtcatcaga
ggtcctttcctggtggccatgggcatgtcctggcaccctgaggagtttaactgttcccac
tgccacatgtctctggtggagtctggctttgtggaggagaggggaacagtgtactgtgct
cactgctatgagaagttctttgcccctacctgcaccagctgcaagcagaaggtcctgggg
gaagtcatcaatgccctgaagcagacatggcatgtgtactgcttcctgtgtgcgtcctgc
cagcagccaatcggaaacaacaccttccacctggaggacgggctgccatactgtgaaaga
gactactatcaactctttggtaccagttgccatggttgcgactttcccatcgaggcagga
gacaagtttctggaggcgttgggattcacctggcatgatacctgcttcgtgtgtgcagtc
tgcaacaccagtttggagggccaagccttcttctctaaaaaggacaaggctctgtgcaag
aaacatgccaatacagtccagatctga
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