Oncorhynchus gorbuscha (pink salmon): 123999112
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Entry
123999112 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 23-like
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123999112
Membrane trafficking [BR:
ogo04131
]
Endosome - Golgi transport
Others
Others
123999112
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
123999112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
123999112
NCBI-ProteinID:
XP_046160485
LinkDB
All DBs
Position
LG16:27211441..27290318
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AA seq
1752 aa
AA seq
DB search
MNGVAFCLVGIPPFPENEAKGWRDGLSSAGDNPRPAMGAGGEGVGFGWQGPRTLLLQKNS
QGFGFTLRHFIVYPPESALHTSLKDEENGNGKGRSRLEPMDTIFVKNVKERGPAHQAGLC
TGDRLVKVNGESVLGKTYSQVIALIQNSESVLEVSIMPKGEDVLQLAYSQDAYLRGNEPY
TGGARNLPVPPPLCYAPRAKSQPPSGAPALMGQNQLDNWSCWAGSASPLSPLDNRSTVGS
TASWQEGWGGHSSPPHRAEEIQCGVTGQQPTGQTRGRSYSSSSSSGGPLSSPLRVHYVNH
NATATTASSQPRKGSQAWASPLQPSPSRSHHCQQALSEWYYNQAAEQRQGRSGSMHQRHR
SYSQDRLCETGPGRHRRGPGGWPHSASQDTLMLLQQSGPGPHGDPSWTYRDWEGARDQSH
HSSYGSRARSENLLVQYDRNGHSLEMLGSPRFERPAWLQQASQQAPRTEAYQRQGNHYGV
APAPSMGRLTQPHHKTQSQSHPHTQPQPQQPVPQSRRLPTGQSLDDQPVGYRSYSPSFNR
KTGRIMQQPSFRDPSYLGPHLSWAPTPKTSPPEGVVPSVPSPLASTTPEPLDKAYRPTNH
DRGAVEGQVEVVAQAQEVKLRQKPPRGEGAPTPCATPTTPPVDGTEPPVFPPDPHNAAPA
PRPSGDGAPHRTNGNLAPLSVEDDAMASIPFIDEPTSPSADLRARHVPASSVVSSGMSSA
PTIVTSPASPTFTFPLTRLFSHDCSSIKSSRRSSYLLAITTERSKSCDEGLNTFREEGRV
FSRLPKRVKSFFTDGSLDSLGAAEEVRSKRHSTSELGSISYSDIWREGWLHYKQILTEKG
KKVGSGMRPWRRVFSVLRSHSLFLYKDKREAVLRGATLGGDADEEQPISIRGCLVDIAYS
ETKRKHALRLTTQDFCEYLLQAEDREDMLDWIKVISENSKTDNEELGFSRQALISKKLND
YRKQSPTGNKPDSSPRVSRAKPSFLLAKMENPTGGKDESSPPKSPWGINIMKKSKKSGPK
AFGVRLEDCQPAANNKFIPMIVEICCGLVEDMGLEYTGIYRVPGNNAVVSSLQDQLNKGS
DINPAEEKWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIDANRMENAGDRLKTMKKLIR
DLPDHYYHTLKFLVGHLKTVADHCEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDR
YKIVETLIQHYIWFFSEDQDKDEKTPVDTKDLVPAPNIDHLLSNIGRTALLGEASDSTNS
DSAKSKGSWGSKRDLTAKDFLTLSIMSAVTGRKRRNRHNGRLVGSSTDDDSEHEPIKASH
LGAEEGEEAGLVVAGTDTAPRAEGEDEEDEEEEEEESVVERVREKVEEVIVPSMPCGSEK
VKAGQMVMLLSEEEAVTAEVKGRVWRGPEDARSIVSGYSTLSTLGRSLTSEGRCDEADDE
RSELVSETDNESGFASRSLTQERPEKHSPASITPTLTPPTPTQTPTAAQRSFLYTHYKPH
PVSPTTQHTTPTPTPSTHTQDPGERSEGGARSTTPSSSSSSTTHRLHPRPSFNSHKLIQC
DTLARKKLKNRGKTKAHSLDLPGPSGEEGAGVPGAQRNRSRTNPSSGSSQESLRPPRPKE
ALPPSEAASFTPSGTGQGQGRGSLADQVRARLLGSADDLRIVGLRKPLSPETRRKRRAWR
RHTVVVSPTESGDKRPALATNKFPMSLATSNQGKPQGSPLDHQELDPRHPLPLGQNPPVT
RRAPASRFHQYL
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttgctttctgcctcgttggaatcccacccttcccagagaacgaagcaaag
ggttggagagatgggctctcctcggccggtgacaaccctcggcctgcgatgggggcggga
ggagagggggttggctttggctggcagggtccccggacgctactactccagaagaactca
cagggcttcggcttcacgctgcgccacttcatcgtctacccaccagagtctgccctgcac
accagcctcaaggacgaggagaacgggaatggaaaggggagaagtaggttggagccaatg
gacaccatatttgtcaagaatgtgaaagagcgaggtcccgctcaccaggctggcttgtgt
acaggggatcggctggtgaaggtgaatggagagagtgtcctggggaaaacctactcccag
gtgatcgccctcatacagaacagtgagagtgtgttggaggtctctataatgccaaaaggt
gaagacgtgctgcagctggcatactcccaggatgcctacctgaggggcaacgagccttac
acagggggagcccggaaccttccggtacccccgcccctctgctacgctccccgcgccaag
tcccagcctccctctggggccccggccctcatgggccagaaccagctggacaactggagc
tgctgggcaggctccgccagccctttgtcccccctggacaaccgctccaccgtgggcagc
acggccagctggcaggaggggtggggcggacacagtagccccccccacagggcggaggag
atccagtgcggtgtgaccggacagcagcctacgggacagaccaggggccgctcctactcc
tcatcttcctcctcaggagggcccctcagcagccctctgcgtgtccactacgtcaaccac
aatgccaccgccaccaccgcctcttctcagccccggaaaggcagccaggcctgggccagc
cctctccagcccagccccagccgcagccatcactgccaacaggccctgtctgagtggtac
tacaaccaagctgctgagcagcgccagggccgcagtggcagcatgcaccaacgccaccgc
agctactctcaggacaggctgtgtgagacaggccccgggcgccaccgacggggtccgggc
ggctggccccacagcgcctcccaggacaccctgatgctactgcaacagtcaggccccggc
ccccacggggacccttcttggacctacagagactgggagggggcccgggaccagagtcac
cactcctcctacggcagcagagcccggtcggagaacctgctggtacagtatgaccgcaat
ggccactcgctggagatgctggggtcaccccgtttcgagaggcccgcctggctgcagcag
gcctcacagcaagcacccagaactgaggcctatcagcggcaggggaaccattacggtgtt
gcgccggccccctctatgggccgtctaacacagccgcaccacaaaacccaatcacagtcc
cacccacatacccagccccagccccaacagccagtcccccagagcagacgtctgcccacc
ggacagagcctggacgaccagccagtaggttaccgcagctacagcccctccttcaaccgc
aagacaggccgtatcatgcagcaaccctccttcagggacccctcctaccttggcccccac
ctcagctgggcccccacccccaaaaccagcccccctgagggtgttgtcccctcagttcca
tcccccctggcctccaccacccctgagccccttgacaaggcctaccgccccaccaaccat
gacagaggggcagtggaaggccaggtggaggtggtagctcaggcccaggaggtcaaactg
agacagaaacccccacggggcgaaggagcgcccacgccatgcgccacccccactacaccc
cctgtagatggcacggaaccccctgtgtttccccctgacccccacaacgctgcccccgcc
cctcgcccctcaggagatggtgccccgcaccgtaccaatggcaacctggcccccctgtct
gtagaggatgacgcaatggcctccattccctttatagatgagccgacgagccccagcgct
gacctccgtgcccgccacgtgcccgcctcctctgtggtgtccagcggcatgagctcagct
cccaccatcgtcaccagccccgcctcccccaccttcaccttccctctaaccaggctcttc
tcacacgactgcagcagtattaaatccagtcgccgttcctcctatcttctagccatcacc
acggagcgctccaagtcatgtgacgagggactcaacaccttcagagaggagggccgcgtc
ttctcgaggctgccaaagagagtgaagagtttcttcactgatgggtctctggacagtctg
ggggcagcggaggaggtgcgctccaaacgccactccacctcggagctgggcagtatcagc
tacagtgacatatggagagagggatggctgcactacaaacagatcctcacggagaagggc
aagaaggtgggcagcggcatgcgtccgtggaggcgggtcttctcagtgttgcgctcccat
tcgctcttcctttacaaggacaagagggaggcggtcctgcggggcgccactctgggaggc
gatgccgacgaggagcagccaatcagcatccggggctgcctggtggacatagcgtacagc
gagaccaagcgcaagcacgcgctgcgtctgaccactcaggacttttgtgaatacctgctg
caggccgaggacagagaggacatgctggactggatcaaggtcatcagcgagaacagcaag
accgacaatgaggagctgggattctcaagacaggctctgatcagtaagaagctcaatgac
tacaggaaacagagtccaacaggcaacaagccggactcctctcccagggtgtcccgtgcc
aagccttccttcctgctggccaagatggagaaccctaccgggggcaaagatgagagcagc
ccccctaagtcaccatgggggatcaacatcatgaagaagtccaagaagtcagggcccaag
gcttttggagtgcggctagaagactgccagccagccgccaacaacaagttcatccctatg
atcgtggagatctgctgtgggctggtggaggacatgggtctggagtacaccggcatctac
agggtcccagggaacaacgcagtggtgtccagccttcaggaccagctcaacaaggggtcg
gacatcaaccctgcagaggagaaatggcaggacctgaacgtgatcagcagcttgctcaag
tctttcttcaggaaacttccggagcccctcttcactgacgataagtacaatgactttatc
gacgcaaaccggatggagaatgccggggaccggctaaagaccatgaaaaaactgatccgt
gacttaccagaccattactaccacactctcaagttcctggttggccatctgaagacggta
gctgaccactgtgagaaaaacaagatggaacctcgtaacttggccctggtgttcgggccc
acgctggtgcggacgtctgaagacaacatgacagacatggtgactcacatgcctgaccgc
tacaagatagtcgagacgctcatccaacactatatctggtttttcagtgaggaccaggac
aaggatgagaagactccagtagacacgaaggacctggtgcctgcccccaatatcgaccac
ttgctctccaacatcggcaggaccgctctgctaggggaggcgtcagactcaaccaacagt
gactcagctaaatctaagggttcgtgggggtcaaagcgagacctcactgccaaggacttt
ctgaccctgtccatcatgtccgccgtcaccggacgcaagcgcaggaatcgccacaacggc
cgcctcgtgggcagcagcacagacgacgactcggagcacgagccaatcaaagccagccac
ctgggggcagaggagggagaagaggcggggctggtggtggcaggaacagacaccgcccca
cgagcagagggagaggatgaggaagatgaggaggaagaagaagaagagtctgtagtagag
agagtgagagagaaggtagaggaggtgatagttcccagtatgccatgcggtagtgagaaa
gtgaaagcagggcagatggtgatgctgctctctgaggaagaggcggtgacagcggaggtg
aagggcagggtgtggcgggggccagaggatgctcgctctatcgtctccggttactccacc
ctttccacactggggcggagcctgacgtctgagggccggtgcgatgaagctgacgacgag
cgcagcgagctggtgagcgagacagacaatgagagcggattcgcctcacgctcccttacc
caggagagacctgagaaacactcccctgcatctattacacccaccctcacacccccaacc
cccacacagacccccacagcagcacaacgaagcttcctctacacacactacaaaccccac
cctgtctcccctacgacccagcacaccacccccacccccacgccctccacacatactcag
gaccctggggagaggagcgagggtggggcgcgatccaccaccccctcctcctcctcctcc
tccaccacccacagactacaccccaggccctccttcaactcccacaagctgatccagtgt
gacacgctggccaggaagaagctaaagaacagagggaagaccaaggctcattctctcgac
ctccctgggccttcaggagaggagggagctggggtaccaggggcccagaggaaccgatcc
aggaccaacccttcctcagggagcagccaggagagcctacgtccaccccggccaaaagaa
gccctgccccccagcgaggctgcctctttcacccccagcgggacagggcagggtcaaggg
cgagggtctctggctgaccaggtgcgtgcacgcctgctgggctcggctgatgacctacgc
atcgtggggctgaggaagccactctccccggagacgaggaggaagagacgggcctggaga
agacacactgtggtggtctcacctaccgagtcgggcgacaagaggcctgcgctagccacc
aacaagttccccatgtcgctggccacttccaaccagggcaaaccacagggatcacccctc
gaccaccaggagcttgacccaagacaccctcttcccctgggccagaatccccccgtcaca
cgccgagcacccgcctccaggttccatcagtacctgtaa
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integrated database retrieval system
