Oncorhynchus gorbuscha (pink salmon): 123999180
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Entry
123999180 CDS
T07892
Name
(RefSeq) TBC1 domain family member 8B-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123999180
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123999180
Endosome - Golgi transport
Rab GTPases and associated proteins
123999180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
123999180
NCBI-ProteinID:
XP_046160632
LinkDB
All DBs
Position
LG16:complement(71294515..71310784)
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AA seq
1130 aa
AA seq
DB search
MWLKPEEILLKNALKLWVAEKGNEYFVLQRRRGYGEGGGGLTGLLVGTLDTMMDSTSKVA
PFRILHQTPDSQIYWSIACGGTKEEINQHWEWLEKNIMRTLSVFDSSDDITSFVQGKIRG
LIAEEGKVSGVQEDDPEKFREALLRFEKWFDLPQKEKLVTYYSCSYWRGRVPCQGWLYLS
TNFLSFYSYLLGSEVKLVVSWNEIWRLEKTSNVILTESIHVLANGEDHYFSMFLHLSETF
LIMEQLADYSIKRLFDKETFQEEPSLSDPLQITKRGLETNARNEQFRAFFRLPKEENLLE
VYESFLWVPFSHFNTLGKICLSESYLCFASQDGSQCHVIIPMREVIGVEKPDRSSRALTV
CVRGKRALRFSEVRDFERLGNAIRRRCGMTASPQHSASTEGIRGECQNLINHFVDNPEEV
AMMVGQKESGKTVSNEALMTVFHPQDAENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFCT
KKTRDLIVRGVPEALRGELWMLFSGAVNDMAVNPGYYSEIVDKSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEELIRMHLTQLTEHMTDLTFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEGLISSHDDAEAVTILSKFFDNVTNKD
SPLPQTVQQNSVGNNDKASSLSKVDISDLIKEAYEKYGDMKSEEVERMRKRNKLYVIQTL
EDTTKQNVLRVVSQEVKFSAPQLDNLYALFKRQHFLSCYWTMNSPVLLHHDPSLAYLEQY
QLGFHQFRVLFSLLEPWSLCSGNDALFLWAFRLLDENQDGLVNFKEFCCALDILYSGTFT
NKLKFLFKLHQPPAFTGSPFHSKGQRLPHFIPMTDDLSHLSRLTVSDLPEDGVIRKSPER
GKGKVDLQAYLKQWQDEILKKEESIKDLPRINQAQFIQFSKTLYNLFHGDPEEESLYRAV
ARVTSLLLRMEEVGRRLQEPTSPTQAAPEEALLNREAYSTPERSSDTPCATITLEAGSIP
QEVEWSFAFEQILASLLNEPVLVRFFERPVDIQARLDHAKGAQLKAKTNK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaaacctgaagagatattgctgaaaaatgcattaaagttatgggtggcagaa
aaaggcaacgaatatttcgtattacaaaggaggcgaggatatggagaaggaggaggaggt
ttgacaggtcttctggttggaactcttgatacgatgatggattccacgtctaaggtcgct
ccatttcgcattctacaccagacaccggactctcagatctactggtcaatagcatgtggt
ggcaccaaggaggagatcaaccaacactgggagtggctggagaagaacatcatgagaacc
ctgtctgtgtttgactccagcgatgacatcaccagctttgtgcagggcaagatcagaggg
ctgattgctgaggaagggaaggtgtcaggcgtgcaggaggacgaccctgagaagttccgt
gaagcactgctgaggtttgagaaatggtttgacctccctcagaaggagaagctggtcacc
tactactcctgtagctactggaggggccgcgtgccctgccagggctggctctacctcagc
accaacttcctgtccttctactcatatctgctggggtctgaggtgaagcttgtagtctcg
tggaatgagatctggaggctggagaaaacgtccaatgtcattctgacggagagcattcat
gtgttggccaatggggaggaccactacttctcgatgttcctacacctcagtgagaccttt
ctgatcatggagcagcttgctgactactccatcaaacgcctatttgataaggagaccttc
caggaagagccctccctctcagacccattacagatcaccaagagaggcttggaaactaat
gctagaaatgagcaattccgggccttcttcaggctgcctaaagaggagaacctgctggag
gtttatgagagcttcctatgggttccattcagccacttcaacacccttgggaagatctgt
ctgtctgagagctacctgtgtttcgctagccaggatggcagccagtgccacgtcatcatc
cccatgagagaggtgattggtgtggagaaaccggaccgtagcagcagggctttgactgtg
tgtgtgcggggtaagagggctctgaggttctctgaagttcgggactttgagcgtctcggc
aatgcaatccgcaggaggtgtgggatgactgccagtcctcaacactctgcatcaactgag
ggcatcagaggggagtgccaaaacctcatcaatcactttgtggacaacccagaggaggtg
gctatgatggtgggacagaaggagagcggcaagactgtcagcaatgaggccctcatgact
gtgttccacccccaggatgctgaaaacctggatcccaaaatgctaaaggagaagatgaag
gagcagtcatggaacatccacttctcagaatatggccgtggcaccagtatgttctgtacc
aagaagacacgagacctgattgtgcgtggtgtccctgaggccttaagaggagagctctgg
atgctcttctcaggtgcagtcaatgacatggccgttaaccctgggtattacagtgagata
gtggataagtctctggggaccagcacccttgccactgatgagatagagagagacctgcac
cgctccctaccagagcaccctgccttccagagcgacacaggcatctctgccctgcgcaga
gtcctcactgcatatgcctacaggaaccccaaaatcggctattgccaggccatgaacatc
ctgacgtcggtcctgttgctctatgctaaagaggaggaggctttctggctgctagtggct
gtctgtgagaggatgctgcctgactactttaaccgcaggatcattggtgccctggtggac
caggcggtgtttgaggagctgatccgaatgcacctcacccagctgacggagcacatgaca
gacctgaccttcttctcctctgtgtccctgtcctggttcctcaccctgtttatcagtgtc
ctgcccatagagagtgctgtcaacgtggtcgactgcttcttctacgacggcatcaaagcc
atcctgcagctgggcctggctgtgctcgactacaacatggagggtttgatcagctcccat
gacgacgctgaggcagtcaccatcctcagcaagtttttcgataatgtgaccaataaggac
agtcctctaccacaaacagtgcagcaaaactcagtggggaacaacgacaaagcatcatcc
ctctccaaggtggacatcagtgatctcatcaaagaagcctatgagaaatatggagacatg
aaatcagaggaagtagagcgcatgcggaaaagaaacaaactgtatgtaatccaaacatta
gaggatactactaaacaaaatgtgctacgggtagtgtcacaagaagtaaagttcagtgct
ccccagcttgataacctttatgcattgttcaagaggcaacatttcctcagctgctactgg
acgatgaacagcccagtgctgctacaccacgaccccagcctggcctatctggagcagtac
cagctgggcttccatcagttcagggtgctcttctccctcctggagccatggtccctctgc
agcggcaacgatgccctcttcctctgggccttccgcctgctggatgagaaccaggatggc
cttgtcaacttcaaagagttctgctgtgccctggacattttgtacagtggcactttcacc
aacaaactgaaattcctgttcaagcttcatcagccaccagctttcacagggagtcctttc
cactcaaaaggccaaagacttcctcactttattccaatgactgacgacctatcccacttg
agtcgattgactgtgtctgatctcccagaagatggcgtgatcaggaaaagccctgaaaga
ggcaaagggaaagtggatctgcaggcctacctgaaacaatggcaagatgagatactaaag
aaagaggagagcatcaaggatttacccagaattaaccaggctcagttcatccagttctcc
aaaacgctctacaatctgttccatggtgacccagaagaggagtctctgtaccgtgctgtg
gctcgtgtcaccagtcttctgctgaggatggaagaagtagggcgcaggctccaggagccc
actagccccacccaggctgccccagaggaggctctactcaacagggaggcctacagcacc
cctgagagaagctcagacaccccttgcgctaccatcactctggaggcaggctccatccca
caggaggtggagtggtcattcgcctttgagcagatcttggcatcgctgctcaacgagcct
gtccttgtgcgcttctttgagaggcctgtggacattcaggcccgactggaccatgccaag
ggtgctcagttgaaagctaagacaaacaagtga
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