KEGG   Oncorhynchus gorbuscha (pink salmon): 123999234
Entry
123999234         CDS       T07892                                 
Name
(RefSeq) protein SMG8-like
  KO
K18734  protein SMG8
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    123999234
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     123999234
SSDB
Motif
Pfam: Smg8_Smg9 DGR1 DUF2794
Other DBs
NCBI-GeneID: 123999234
NCBI-ProteinID: XP_046160740
LinkDB
Position
LG16:57560300..57564316
AA seq 931 aa
MALPVSVGALLESEVIEDPLYKDEGLCVLGIFGKTAMLPGSPKEFLINTLADKHIYPLFG
LDETDNHNSGSLIHAYYSQENRVLYLVLTSVCDNRQLLWACESLSTGVGHSEAHEFWKGA
DKQHCLALLYLFSLCHVLLLVHPTCCFDVTYDRLFRALDALRQKVLPLLRAAIKDSTISK
EWKVNCRPCPPRLLFVFQMNGALRSYGGNGSDPSGGNADKPKKHSPRRRLQHALEDQIYR
IFRKSRVLTNQSSNCLFTVPANQAFVYVVPGPEEDPVAAVLGQLRSNCALRENDTSTSVS
GPRRYQQMRHSARQPSFNVESSSFSGGQLVDCNLKEFLWQHVELVLTKKGFDDSVGRNPQ
PSHFELPTYSKWAQVAYRLHQIMIANTEEETAELAVKVQSQLKFLEGFLDADAKFSENRC
QKALPLAHSAYQSNLPHNYTTTVHKNQLTQALRVYSQHARGVAFQRYALQLHEDCYKFWS
NGHQLCEERSLTDQHCVHKFHLLPQPDEKPEMDRNPPILNHNSRGRSTSSCNCGRKQAPR
EDPFDIQAANYDFYQMFEEKCCGKLERIDFPVFQPSTPDPAPACEEAPRPTEVAAPVPVP
LPEPGSGPSEGERLKESIPASHPVSHTPGESTSLSLALSLGHSTDSLGPYGDGGGGEGQE
KRHSLVDRQASTVEYLPGMLHSGCSKGLLPKFSSWSLVKLGPAKTYNPHTGLEQPGFLPG
SSFLLPWDVVIRSRSEEEVGLTEPLDGGPSSWPAPNKTVAGKRGSAGGLGRGRRRDDVAR
AFVGFEYEDSRGRRFLSSGPDKVVKVLGPGGAKEPATRALNTDMPLYIPSPAQGRGLKTH
YAQLARLYIVVPDAPLEITLNPQVQPGPPPCPVFHPERTELVLPSDGLWVLRFPYSYVTD
RGPCYPPKENQPLASYKVLRGILRANPLPPQ
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggcgttgcccgtgagtgtgggagcgcttctagaatcagaagtaatagaggatccatta
tacaaagatgaaggtctctgtgtacttggtatattcggtaagactgcaatgctacccgga
tcaccgaaagagtttctaatcaacacgctcgcggacaagcacatctatccactatttgga
ctggatgagacagacaatcacaacagtggaagcttgattcatgcgtactacagccaagaa
aaccgcgtattgtatctggtgcttacttcagtttgtgacaaccgacagcttttgtgggcg
tgtgagtctttgagtacgggcgtcggacactcggaggcgcacgaattctggaaaggagcg
gataaacagcattgcttagcattgctttacctattctcgttgtgccatgtcctgctactg
gtccatcctacatgctgttttgatgtcacctatgaccgattgttccgtgctctggatgca
cttcgccagaaagttctgccactactacgtgctgcaatcaaggattccaccatatccaaa
gaatggaaggtgaactgccggccctgtcctcctcgcctgctattcgtattccagatgaat
ggagccttgcgaagctatggtggaaatggttcagacccttctgggggaaatgctgataag
cccaagaaacactcgccaaggagacgcctccagcatgcattggaagaccagatatatcgc
attttccggaaaagtcgggtcctcaccaaccagagcagtaattgcttattcactgtccct
gctaaccaagcgtttgtttacgtggtgcctgggccagaggaggacccagtggcagccgtg
ctagggcagctgcgctccaactgtgccctgagggaaaatgacaccagcacctctgtgtct
ggacccaggcgctaccaacaaatgcgtcactctgcaagacaaccatccttcaatgtagaa
agcagcagcttctcaggggggcaactagtagactgtaatttgaaggagttcctttggcag
catgtcgaactggtgttgaccaagaaaggctttgatgacagcgttggtcgcaatccgcag
ccttctcattttgagctgccaacctactccaaatgggcacaagtggcctacaggctgcat
cagatcatgatagccaacacagaggaggaaactgcagagctggccgtcaaggtgcagagt
cagcttaagtttttggaaggtttcctggacgcagatgccaagttctctgagaaccgctgc
cagaaagccctgccactggcacatagtgcctaccagtctaaccttccccataactatacc
accactgtgcataaaaaccaactgacacaagcacttcgggtctacagccagcatgcacgc
ggtgtagcttttcagcgctatgccttgcagttgcatgaggactgctacaagttctggagt
aatgggcatcagctatgtgaagagcgcagtctgacagaccaacactgtgtgcacaagttt
cacctgctgcctcagccagatgagaagccagagatggaccgcaacccgcccatcctcaac
cacaacagcagggggcgttccactagctcgtgtaactgtggccggaagcaagcccctcgt
gaggacccctttgacatccaagctgccaactacgacttctaccaaatgtttgaggagaaa
tgctgcgggaagctggagaggatcgactttcctgttttccagccaagcaccccagatcca
gccccggcctgtgaagaagcacccagacccactgaggtggctgccccagtcccagtccca
ctgccagagcctgggtcagggccatcagagggggagaggctaaaggagagcatcccagcg
tcccacccagtgtcccacacccccggagagagcaccagcctcagcctggccctcagcctg
ggccattccactgacagcctagggccttatggagatggagggggcggtgagggccaggag
aagaggcacagcctggtggatcgccaggcctccactgtggagtaccttccaggcatgctc
cactcaggctgctccaaaggtctgctgcctaagttctccagctggtcgctggtcaagctt
ggccctgctaagacctacaacccccacactggcctggagcagccaggcttcctgcctggc
tcctccttcctcctgccctgggatgtggtgattcgctcccgctctgaagaggaggtgggc
ttaactgagcccttggatgggggaccctcttcctggccggcccccaacaaaaccgtggcg
gggaagcgagggagtgcagggggccttggtcggggacgcaggcgggatgacgtggcccgg
gcctttgtgggctttgagtacgaggacagtaggggccggcgtttcctcagctcaggacct
gataaagtggtgaaagtgctggggcctggaggggccaaagagccagccaccagggccctg
aacacagacatgcccctgtacattccctctccagcccaggggcgtggcctaaagacccac
tacgcccagctggcgcgcctctacattgtggtccctgacgcccccttggagataacactc
aacccacaggtccaacccggcccccctccatgtccagtgttccaccccgagcggacagag
ctggtgctgccctccgatggcctgtgggtcctacgtttcccctattcctatgtcacagac
cgtggcccatgctacccacctaaagagaaccagcccctggccagctacaaggtcctcaga
ggcatcctgcgtgccaaccctcttcctccacagtaa

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