Oncorhynchus gorbuscha (pink salmon): 123999389
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Entry
123999389 CDS
T07892
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04144
Endocytosis
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123999389 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123999389 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
123999389 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123999389 (nedd4l)
04121 Ubiquitin system [BR:
ogo04121
]
123999389 (nedd4l)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123999389 (nedd4l)
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
123999389 (nedd4l)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
HECT type E3
123999389 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
123999389
NCBI-ProteinID:
XP_046161093
LinkDB
All DBs
Position
LG16:89206445..89326404
Genome browser
AA seq
1142 aa
AA seq
DB search
MPHNGNRQPTEPVQPKRRVFCVTPQDGSNSSGQVSSAMSNGNGGSPGISIGGFHISRNSS
DGSEVQQFRIGYGSGNQGAGPCRWSVQQQNSDPGQPGTTQRRLVFQLGQQDQARQANNIN
LVATSEPTDLGFTGSKGGRVVRFPKIRLERSSSHQRLPRGNHQTFGDVGDPQGIEGNPSE
MDGQSMDIEDGCTFNIRREPRKQQPHFKISFSQNGDPPTVQDISLGNGQTRDDFLGQVDV
PLNHLPTEDPTMERPYTFKDFLLRPRRSVPDYRRSHKSRVKGYLRLKMAYLPKTGSPEEE
TTEGITREEAEGWEVNDSADPSVQRPQAVQPPLPPGWEEKVDNLGRTYYVNHNNRYTQWK
RPSNVDDVSEVENDNQQRANSIQAHRVFRSRRHISEDLENEHTEPRDMEDSWEPITEESP
DGPLPVPSSSMATAIPQTPAPPPLQEFSEEINLHLSLSPTPSGPPPDINGEVAAPSHASA
VQSHLTSRLRSSSMTDGVSDQAQPPPPASSQTRRTRALTVTGVEEPMSQSTAYALTTPGL
PPGWEERKDAKGRTYYVNHNNRCTTWTKPILQHTEDEASTSDSGAAAEAASTSSSANNNS
HLIEPQIRRARSLSSPTVTLSSPLEGAANNIAVRRAVKDTLSNPQSPQPSPYSSPKSGHQ
SQQSFLPPGWEMRIAPNGRPFFIDHNSRLTTWEDPRLKYPVHMRTKASLDPGDLGPLPPG
WEERVHADGRTFYIDHNTKATQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPAD
IPNRFEMKLHRTNIFEESYRRIMSLKRPDILKARLWIEFESEKGLDYGGVAREWFFLLSK
EMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVFHGKLLDGFFIR
PFYKMMLGKQITLKDMESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPS
GGDMVVTNHNKMEYIDLVIQWRFVNRVQKQMNAFLEGFTELTLIDLIKIFDENELELLMC
GLGDVDVNDWRQHTVYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGF
AELYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPTYESFDDLRERLLMAVENAQGFEG
VD
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataatgggaatcgacagcccacagagccggttcaacctaagcgaagggttttc
tgcgtcacaccccaagatggctcaaactcaagcggtcaggtcagctcagctatgtctaac
ggaaatggaggctcaccgggaatcagcatcggaggcttccacatctcaaggaactcctca
gatggatctgaagtccagcagttcaggatcggctatggctctggcaatcaaggagctggg
ccctgccgctggtccgtccagcagcagaactctgacccgggccaacctggcaccactcaa
aggcggcttgtgttccagcttggacagcaggaccaagccagacaggccaacaatataaac
cttgtggccactagtgagcccaccgatctgggtttcactggctccaagggagggcgtgtg
gtacgtttccccaagatacggctggagagaagctcttcgcatcagcggctgccccgtggg
aaccaccagacattcggtgatgttggggatcctcagggcattgaaggaaacccttcagag
atggacggtcaaagtatggatattgaagatggctgtactttcaacatcaggagagaaccc
cgcaagcagcagcctcacttcaagatttctttcagtcagaatggtgatccccctaccgta
caggatataagcctgggaaatggtcagacgagggacgatttcctgggacaggtcgatgtg
cctctcaatcatttaccgaccgaggaccctacgatggagcggccgtacacgtttaaagat
ttcctcctacggccacgaaggtcagttcccgactaccgacgaagccacaagtcccgggtg
aagggttatctacggctaaagatggcctacctgccgaagactggaagtccggaggaagag
accactgaagggattaccagggaggaggcagagggctgggaggtgaacgactctgccgat
cccagcgtccagaggccccaggctgtccagcccccactgcccccaggatgggaggagaag
gttgataacctgggcagaacctactacgtcaaccacaacaaccgctatacacagtggaaa
cgacccagtaacgtggatgatgtttcggaggtggagaatgacaatcagcagcgggcgaac
agcatccaggcccaccgggttttcaggtctagacgacacatctctgaagacttggagaac
gaacacacagaacccagagacatggaagattcgtgggagccaatcaccgaagagagtcca
gacggccccctacctgtcccctcctcctcaatggcgacggccatcccccaaacgcctgcc
cccccacccctccaggagttctcagaggagatcaacttgcacctctctctctctccaacc
ccatccggccccccgcctgacatcaacggagaggtggccgcccccagccacgcttctgct
gtgcagagccatctgacctccaggctgcgctcctccagtatgacagatggggtcagtgac
caggcccagcctcctcctccagcgagctcccagaccagaagaaccagagctctaacagtc
actggagttgaggagcccatgtctcagtcgacagcctatgccctgaccacaccaggccta
cctccaggatgggaggagaggaaggacgccaagggacgcacgtattacgtcaatcataac
aaccgctgcaccacctggaccaagcctatcctccagcacactgaagacgaagcgagtacc
tctgactccggggctgcagctgaagccgcctccacctcttcctcagccaacaacaatagt
catctgattgaaccgcaaatacgccgcgcccgtagtctcagttcccctaccgttaccctg
tcctcccccttagagggggcggccaacaacatagctgtgcgtcgggcggtgaaggacacc
ctctccaacccccagtccccccagccctccccctacagctccccaaaatcaggacatcag
tcccagcagagcttcctgcccccggggtgggagatgaggatagcacccaacggaagaccc
ttcttcattgaccacaacagcaggctcaccacatgggaggacccgaggttgaagtatcca
gtccacatgagaacaaaagcctctctggaccctggtgacctggggcctcttcctcctggc
tgggaggaacgcgtgcatgcagatggcaggaccttctacattgaccacaacaccaaagcc
actcaatgggaggatcctcgtctacagagtcctgctatcacagggcctgctgtgccatac
tctagagaattcaaacagaaatacgattacttcagaaagaagttgaagaaaccggcggac
atccctaacaggtttgagatgaagctgcacaggaccaacatctttgaggagtcgtatcgc
cgtatcatgtctctgaagagaccagatatcctgaaggcccgcctctggatcgagtttgag
tcagagaaggggctggactacggaggtgtggccagggagtggttcttcctgttgtctaag
gagatgttcaacccttactatggactcttcgaatactcagccacagataactacacacta
cagatcaaccctaactctgggctgtgtaacgaggaccacctctcatacttcaagttcatt
ggtcgagtggcagggatggccgtgttccatgggaagctattggacggcttcttcatccga
ccattctacaagatgatgcttgggaagcagatcacactgaaagacatggaatcagtggac
agtgaatactacaactctctgaagtggatcctggagaatgatcctactgagctggacctg
cggttctgtatcgatgaggataactttggacagacgtatcaggtggatctgaagcccagt
ggtggggacatggtggtgaccaaccacaacaaaatggaatacatcgatcttgtcattcag
tggaggtttgtgaaccgggtccagaaacagatgaatgccttcttggagggattcactgaa
ctcactctcatcgacctcatcaagatatttgatgaaaacgagcttgagctgttgatgtgt
ggtctgggtgacgtggatgtgaatgactggcgacaacacaccgtctacaagaacggttac
tgccccaaccacccagttatacagtggttctggaaggctgtcctgctgatggatgctgag
aagaggatccgtctgcttcagtttgtcaccgggacatccagagtccctatgaacggcttc
gctgagctctatggttccaatgggcctcagctgttcaccattgagcagtggggaacgcct
gataagctgcccagagcacacacctgcttcaacaggctggacctgcctacctacgagtcg
tttgatgacctccgagagaggctgctgatggctgtggagaacgctcagggctttgagggc
gtcgattaa
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