Oncorhynchus gorbuscha (pink salmon): 123999590
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Entry
123999590 CDS
T07892
Name
(RefSeq) procollagen galactosyltransferase 2-like isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo00514
Other types of O-glycan biosynthesis
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
123999590
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
123999590
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
123999590
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
123999590
Glycosyltransferases [BR:
ogo01003
]
O-Glycan biosynthesis
O-linked Gal type
123999590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
123999590
NCBI-ProteinID:
XP_046161456
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All DBs
Position
LG16:85925020..85955694
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AA seq
590 aa
AA seq
DB search
MFLWILVLGAFVSRSECYFSEEKYPEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKARISVWAATDHNADNTTAVLREWLTVMQQFYHYVEWRPMEHPTSYPGEMGPKYWSTGR
YEYLMKLKQAALNFAKTRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHLDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSISFSHLILEATIDG
PPMAPSKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNRNLQAFSTRPLLVQPAQ
YAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQPDMLQTSYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttggattttagttttaggggccttcgtttctagatcagaatgttacttttcg
gaggagaaatatccagaagaatcgaaaatgcagccgccaacggttgttattgcgatcatt
gctcggaacgcggcgcattccttgccgtactacctcggagcattggagagactgaactat
cccaaagcacgcatttctgtttgggcagcgacagatcacaatgctgacaacactactgct
gttctgagagaatggctgacagtcatgcaacagttttatcactacgtggaatggaggcct
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaccggcaga
tatgaatacctgatgaaactcaaacaggctgctctcaacttcgccaagacacgctgggct
gactacatactgtatgctgacacagacaacatcctgaccaacccagagactctgaacctt
ctgatagcagagaacaagtctgttgtggcccccatgctggactctcagggagcttactcc
aactactggtgcggcatcactccccaaggttactaccggcgtacagctgagtatttccct
accagacagcgccaccggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggtatgaagaagctggccttccaccctcctcacctggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgccgcgtctcagaggtgcag
atgtacctgtgtaacaaggtgaggtatggttacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcagctttagtcatctcatcctggaggccaccatcgatggc
ccccccatggccccctccaaatacgtgagcctcttccccaaacagagagacctcatgggc
ttcgatgaggtgtacctgatcaacctgcgtcgtcgccaggaccgtagagacaggatgctg
tattctctcaatgagctagagatagatgtcaaggtggtggacgccatcgatggaggagct
ctgaacagcagtgatataaagattctgggagtggacatactgcctggttactatgacccg
ttctctcgccgtaccctgacaaaaggagaggtgggatgcttcctgagtcattactatatc
tggaaggagatggtagaccagcagatggacaaggcgctgatcttcgaggatgacgtgcgt
ttccaggccaacttcaagcggcgtgtacttcgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccaggtgatgaggaggtg
gtggaaaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctatgcc
atctctctccagggtgcccagaaacttctcaacgctgaacccctctccaagatgctgccc
gtcgacgaattcttacccatcatgtacgacaaacacaccaatgagaactacaagtcccac
tatcctaaccgtaacctgcaggcgttctccacacgccccctactggtgcaaccagcccaa
tacgccggggaccccaagtgggtgagcgacacagagacctccacgctgtgggacgacgac
aacgtgcggacagactggaggggctcccacaagacgctgaagggggctccccaacccgac
atgctgcagacgtcatataaagatgagctgtag
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