Oncorhynchus gorbuscha (pink salmon): 123999642
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Entry
123999642 CDS
T07892
Name
(RefSeq) roundabout homolog 2-like isoform X1
KO
K06755
roundabout, axon guidance receptor 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123999642
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
ROBO family
123999642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
fn3_4
Izumo-Ig
CBX7_C
Motif
Other DBs
NCBI-GeneID:
123999642
NCBI-ProteinID:
XP_046161555
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All DBs
Position
LG16:complement(54322492..54458648)
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AA seq
1413 aa
AA seq
DB search
MEFRLTLDTLPVIFALIGFVFGSRPRLEDAPPRIVEHPSDLIVSKGEPATLNCKAEGRPS
PMVEWYKDGERVETDREDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEA
VSRNASLEVAILRDDFRQTPSDVVVAAGEPAVMECIPPRGHPEPTISWKRNNMKVNDHDE
RITIRGGKLMISNTRKSDAGMFVCVGTNMVGERDSDPAELVVFERPMFVKRPVNQVVLAD
DMVDFLCEAHGDPAPTIRWRREEGELPRGRSEIRSDHSLRLTQVRAEDEGTYTCVSENSV
GKAEASGSLQVHVGPFMPPQIVVRPRDQITGQGRTVTFLCGTKGNPPPAVFWQKEGSQIL
LFPIQEAAQSGRYSVSLSGELTITDVLSEDSGYYICQAISVAGSILTKALLEVESAPSDR
VPPIIRQGPANQTLAPGSTAQLQCHVMGNPLPSIQWEKDGQRILGDERVSMMEKGTFQIT
NLQETDSGAYTCVASSSSGETTWSGVLTVKESGGSSVPQASEPFQLPGPPQKPVVTDVTR
NSVTLTWQPNAHEGGAAVTSYIIEAFSQSAGSTWQTVADLVKLEKHTVSGLFPNTIYLFI
VRAVNAYGLSDPSPISEPVRTQDVSPTGQGVDHRQVQKELGEVAVQLQDPVTLTASSVQV
SWMVDRQSQYIQGYRILYRPRGGTWQLQDVKAPSERLAVVADLLKGTEYEIKIRPYFDEF
QGMDSRLLLVRTPEEVPSAPPKAVTVVTVKLSNSSSISVSWEPPPAEMQNGIIQEYKVWC
VGNDTQTRYHINTTVDGTFLSTVLKGLLPGILYQVEVAAVTSAGVGTHSQPVSILIKLPA
EAPSVPSEDSDEGSVSLAEQITDVVKQPAFIAGIGGACWAILMGFSVWIYCRRKKRKELS
HYTASFNYTPAVGFPHGEASGLNGRPGMLGGNMGNYPWLADSWPTTNLVHSGKEAVNCCT
SKHDTAERYYNEAGISNYLNQTEKYSTGDSTEGPIYSTIDPTAEDLRSFNSPYSSTTPYA
STPIMPFTNQALQGSHSPTEQDGGHWITQPAGPSSQYAQPDRCRTDSGKPKQKSMGKAVK
TPSMNWTEALPAPPSFGELEQCVVEDLPIDDHEDMELGSDEEEWCPPLPDRTYLTEGCED
GPAPPLRGGVSSPTTSYSHQSTATLTPSPREESHHPPHDTAHLHHHDGQQLARRLPCGPV
PVPLVPSPPLTQSNPNLSAQQHSEDTEGGTPLRNGSNHRRDFTEGETLSADNISSTTPTR
ALPSPADNTQAPPGQKSRVKKKTSKGGAYRREVLNQGDLPPPPEPPPENGAVRGSAGTVE
CGNTSLDREGGPGTLSSMERKEGERSTPNRKGSGQRRQDDEDLISYGKPSYLVGRGGHMS
SNCSTTGSSSSRGSTGSRGGHCPGRKCNEERRK
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcgcctcacgttggataccctaccggttatttttgcgcttattggtttcgtt
tttggatcccgacccaggttggaggatgcccctccgcgaatcgtggagcacccctctgac
ctgatcgtgtccaagggcgagccggccaccctcaactgcaaagcagaggggcgtcctagc
cccatggtggagtggtacaaagatggcgaacgagtggagacggacagggaagatccgcgc
tcccaccgtatgctgctgcccagcggctccctgttcttcctgcgtatcgtccatggtcga
cggagcaaacccgacgagggggtctatgtgtgcgtggcacgcaactacctaggcgaggcc
gtcagtcgcaacgcatcactggaagtggcaatcttgagggatgacttcaggcagacaccc
agtgacgtagtcgtggcggcaggggagccggcggtcatggagtgcatccccccgcggggc
catccggagcccaccatctcctggaagaggaacaacatgaaggtcaacgaccacgatgag
aggatcaccatccgaggaggaaagttgatgatttcaaacacgaggaagagcgatgcgggc
atgtttgtgtgtgtgggcaccaatatggtgggagaaagggacagcgacccagcagaactt
gtggtgtttgagcggcccatgttcgttaagcgtccagtgaaccaggtggtgctggcagat
gacatggtggacttcctgtgtgaggcccatggagaccccgcccccaccatccgctggagg
agagaggagggagagctgccccgtggcaggtcagagatccgcagtgaccacagcttgcgt
ctgactcaggtccgggccgaggacgagggcacctacacgtgtgtgtctgagaacagcgtg
ggaaaggcagaggcatcgggcagcctgcaggtccacgtgggtccatttatgccccctcag
atcgttgttcgaccccgggaccagatcacaggccagggtcgcaccgtaaccttcctctgt
ggcaccaagggcaaccctccacccgctgtgttctggcagaaagaaggcagccagatcctg
ctgttccccatccaggaagctgcccagtccggccgatactctgtgtctctgagcggggag
ctgaccatcacagacgtcctcagtgaggactcgggatactacatctgtcaggccatctct
gtggccgggagcatcctcaccaaggccctgctggaggtcgagagtgcaccctccgaccga
gtcccgcccatcatccgccaagggccagccaatcaaacgttggcaccaggctccaccgct
cagttgcagtgccacgtgatgggcaaccctctgcccagcatccaatgggagaaggatggc
caaaggatacttggcgacgagcgtgtcagcatgatggagaagggaacgtttcagatcaca
aacctgcaggaaaccgactcaggggcctacacctgcgtggcttccagctcgagcggagag
acgacatggagcggagtactcacggtgaaagagagtggaggttcgtctgtcccccaggca
tcagaacctttccagctgccaggaccgccccagaagcctgtggtgaccgacgtgacgcgc
aacagtgtcaccctcacctggcagcccaacgcccacgagggaggcgccgccgtcacctca
tacatcatcgaggccttcagccaatcagcaggcagtacatggcaaacggtggctgacttg
gtcaagttggagaaacacacggtcagtggtctcttccccaacaccatctacctattcatc
gtccgagcggtcaacgcttatggcctgagtgaccccagccccatctctgagcccgtccgc
acacaagatgtaagtcccaccggccagggagtggaccacaggcaggtccagaaagagctg
ggagaggtggccgttcagcttcaggatcccgtcacactcactgcctccagtgttcaagta
tcatggatggtggaccgtcagtcccagtacatccagggctaccggattctctaccggccc
aggggtggcacctggcagctgcaggatgtcaaggccccgtcggagcgcctggctgtggtc
gctgatctgctcaaaggcactgagtacgagatcaagatccggccctatttcgacgagttc
cagggcatggacagccggctgcttctggtcagaacaccagaggaagtcccgagtgcccct
cccaaagcagtcaccgtggttacagtgaagctgagcaacagctccagcattagtgtctcc
tgggagcctccccccgccgagatgcagaatggaatcatccaggagtacaaggtgtggtgt
gtaggcaacgacacccagacccgctaccacatcaacaccaccgtagatggcaccttcctc
tccactgtgctcaaggggctgctgccaggcattctgtaccaggtggaggtggcagcagtg
accagcgccggagtgggcacccacagccagcctgtgtccatcctcattaagctgccagcg
gaggcaccttcagtgcccagcgaggacagtgatgaaggcagcgtgagcctggccgagcag
atcactgatgtggtgaagcagccggcgttcatcgctgggatcggcggggcctgctgggcc
atcctcatgggtttcagtgtgtggatctactgccgccgcaagaagagaaaggaactgagt
cactataccgcatcgttcaactacacacctgcagttggctttccacatggagaggcatct
ggactcaatggaaggcctggcatgctgggtggcaacatgggcaattacccatggctggca
gactcatggcccaccaccaacctggtccatagtggcaaagaggccgtcaactgctgcacc
tccaaacacgacactgcagagagatactacaatgaagcgggcatatccaactacctaaac
cagacagagaagtacagcacgggcgattccaccgaaggccctatctacagcaccatcgac
cccaccgccgaggacctccgcagctttaacagcccctactcctccaccacgccctacgcc
agcactccaatcatgcccttcaccaaccaggcactccaggggtctcacagccccacagag
caagatggcggccactggatcacccagcccgccggaccttcctcccagtacgcccaaccc
gaccgctgcaggacggacagcggtaaacccaagcagaagtcaatgggcaaggcggtgaaa
accccctctatgaactggactgaagccctgccagcgcccccctcctttggggagctggag
cagtgtgtggtggaggatttgcccatagatgaccatgaggacatggagctagggtctgat
gaggaagagtggtgcccgccccttccagacaggacctatctgaccgagggatgtgaggat
ggtcccgcccctcccctcaggggtggtgtctcgtcccccaccacttcctacagtcaccag
tccactgctactctcacgccatcgccccgagaggagagccaccatccaccccacgacaca
gcacaccttcaccaccatgacgggcagcagctagcacgtagattaccttgtggtcccgtc
ccagtgcccctggtgcccagccctcccctcacccagtccaaccctaacctctcagcccag
cagcacagtgaggacaccgaggggggcacaccgctccgcaatggctcgaatcatcgccgt
gacttcactgagggggaaacgctgagtgccgacaatatcagctccaccacacctacaaga
gctctgccatccccagcagacaacacacaggctccccctggccagaagtcgcgagtgaaa
aagaagacctccaagggcggcgcttacagaagagaggtgctgaaccaaggagacctcccc
cctccaccagagccacctccagagaacggagcagttcggggctcagcagggactgtagaa
tgtggcaacacgtccctggacagagaggggggccctgggaccttgtcctccatggagagg
aaagaaggagagcggagcactcccaacaggaagggatcgggacagcgacgccaagacgat
gaggacctgatctcatatggcaaacccagctacctggtggggcgggggggtcatatgtcc
agcaactgctccaccacaggaagctcctcatcgcggggctccacagggtcacgagggggt
cactgcccgggcaggaaatgcaacgaggagcggaggaaatga
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