Oncorhynchus gorbuscha (pink salmon): 123999655
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Entry
123999655 CDS
T07892
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123999655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123999655
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123999655
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
123999655
NCBI-ProteinID:
XP_046161577
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All DBs
Position
LG16:complement(68344997..68359136)
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AA seq
1272 aa
AA seq
DB search
MIAAQELHTEFQFPHETDTQLSSDTDLEDPDVKNAKLGKGKGGRKGKKAPGEKGKGGGVK
GTGLGGVNGHHQENGMESMTLFEVVKMGKSATQSIVDDWIESYKSDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
VRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLRCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMALDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHGGPEEEGMPRRGRQSLNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLLEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYIILWHLAKVSEGSSTKGNMVTLRKQMRAFCLMCQRYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSGREQLEALIYTPDSPLQAELLNFILDHVFIDQDDDNNST
DGQQDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRSSSIRTKKAKPASTGKRK
LPEAEESSSCSTDTVWMNQEQNVQMPVMMPSPHLTSTVLRDPKKMRPEESYMGVYAMTSE
QQHQQLPPQQHHHQTPMDYNTQVTWMLAQRQQAEARQQQERASMQYAKMRSHMQNAIRRG
SGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSS
IMDDSVLNVSMF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaagagttgcacacagagtttcagtttcctcacgagaccgatacacag
ttatcctctgacacagaccttgaggaccctgatgtcaagaatgcaaagcttgggaaagga
aagggtggaaggaaggggaagaaagcccctggagagaaggggaagggtggtggagtgaag
ggtactggccttggcggggtgaatggccatcaccaggagaatgggatggagagcatgacc
ctgttcgaggtggtgaagatggggaagagtgccacacagtccatcgttgatgactggatt
gagtcttacaagagtgatcgagacattgcactcctggacttgatcaactttttcatccag
tgctccggttgtaaaggtgctgtcagtgcagagatgttcagacacatgcaaaactctgag
atcatcaggaagatgacagaggaatttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgacgagtacatgatggacacagtcatctcgctg
ctcacgggcctgtctgactcacaggtccgagccttcagacacaccagcacactggcagcc
atgaaattgatgacagccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtatgaggcagagaggaacaaggtcatggccaagagggccaatgatagg
ctagagctcctgttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgatttttaaaggcgtgtttgttcacagatatcgcgatgctatagctgag
gtccgggcaatctgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgttggatggaccatgcatgacaagcaaggagaagtg
cgcctcaggtgtctgactgcgctccaaggcctgtactataaccgggagctcaacactcga
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatggctctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgcccatcgacct
gtggctgtggctgcaggagagttcctctataagaagctcttcagtcatggaggtccagag
gaggaagggatgcccaggaggggcaggcagagcctcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagcctg
tgggagtgtgcaggggagctgctcaaagactgggagagcatgatcagcctgctactggat
gagcccatgccaggggaggaagccctgacagaccaccaggagactgctctgatagagata
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcagaggcactggg
aagagggtcctgacagcgaaagaaaagaaaacccagctggatgaccggacgagaatcact
gagatcttcgctgtggcgttgcctctgttgttggccaagtactccgttgatgctgagaag
gtgaccaacttactgcagctaccgcagttctttgacctagaaatctacaccactggtcga
ttggaaaagcacttggagtcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagaccgacgtgctggaggcgtgctccatgacctaccacgctctctgcaacgaggagttc
accatcttcaacagggtggacatcgccaggtcccagctactggacgagttggtggacaag
ttcaacagactcctggaggacttcctgctggagggtgaggaaccagatgaggatgatgcc
taccaggtcctgtccacactaaagaggatcactgctttccacaatgcacatgacctctct
aaatgggacctgttcaccagcaactataagctattaaacacaggacttcagaatggagat
atgcctgagcagattgtaattcatgcgatgcagtgcacacactacatcattctgtggcac
ctagccaaggtctcagagggcagctccacaaaggggaacatggtcaccctgaggaagcag
atgagggccttctgtctgatgtgtcaacgctacctcaccagtgtcaacaccactgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagatagtgtcg
tcgggccgggagcagctggaggctctgatctacactccagactcccccctacaggcagag
ctgctcaacttcatcctggaccacgtctttatcgaccaggacgatgacaacaacagcaca
gatgggcagcaagatgatgaagccagtaaaatcgaggctttacacaagagacgtaacctg
ctggcagcgtactgcaaactgatcatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaatgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaaccttgccttcctggacattctcagc
gagttttcctccaaacttctccgtcaggacaagaagactgttcacctctacctggagcgg
ttcatgaccttccagatggccctgcaacgagaggactgttggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtctgtcatcagcggctacagc
agccgaagttccagcatcaggaccaagaaggccaagccagccagcaccggaaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagacacagtgtggatgaaccaggag
cagaacgtgcagatgccagtgatgatgccctcgccacatctaacctccactgtcctgagg
gaccccaagaaaatgaggccagaggagagctacatgggtgtctatgctatgacatcagag
cagcagcaccaacagctgcccccccaacagcaccaccatcagacccccatggactacaat
acccaggtgacctggatgctagcccagagacagcaggcagaggcccggcagcaacaggag
cgagccagcatgcagtatgccaagatgaggagccacatgcagaatgcaatccgccgcggt
tcaggactcatggaggatgatgaggagccaatagtagaggatgtaatgatgtcatcagag
gaccgtttggaagatctcaacgagggcatggattttgacactatggatattgatctgcca
ccatctaaaaatcgcagagagagatcagagctgaagccagactacttcgatccttcttcg
atcatggatgattcggtcctcaatgtttcaatgttctaa
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