Oncorhynchus gorbuscha (pink salmon): 123999716
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Entry
123999716 CDS
T07892
Name
(RefSeq) YTH domain-containing protein 1-like isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123999716
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123999716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
123999716
NCBI-ProteinID:
XP_046161684
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All DBs
Position
LG16:95908951..95948605
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AA seq
733 aa
AA seq
DB search
MAVDKRDEKEGELNVLDDILTEAPDQDDELYNPESEQHVNQKKGSKRKNNRGDNHVLKRL
RPTAHTRQATKRSAPLAGASGKKPVDSRRGRHPSEYDTDSYYEDRKTHPIRDGGAQRGEP
PKAAHLDKPLGRRKTHPMRDGGAQRGEPPKAAHPDKPLGRRREPDRHRIMPELTTEKQSP
PSEERKVSPSKEETEEEGASDQETGSTAESSEGHRSNVDEEGEEDEEEGEEEEYEVQEVD
QRAKNAPNDYDIRSEVSDSQSESVSFSEGESVLSGSASEASGSEKTHEKLSSSVRAVRKN
QNSKLKYVIRDARFFMIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSDRSVILVFSV
KESGKFQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLSN
SWNEHKPVKIGRDGQEMEPGCGMQLCVTFPQDESINLFQVIHKMRHKRRMPSEPRSRGRP
PHREPTRGDMGSLPNSCRGRPEENAIHNRKRQRIDYPAEFPQRPGFTLDPRNPPVDRRFP
TGVRRDVFLNGSYNDYMREFHHTVGQPTPWQGMAPYPGMEQQPHHPFYQHHPPPPQSHPP
YAGQHPVPHDARFREPVPHEARFREPVPHDARFREPVPHEARFREPVPHEARFREKRLVR
SYSSSVHDYDMRVDDFLRRTQAVVTSRRSRPRERDRQRERERPRDARRDRDRGRDRERDR
DREKEKERGHYRR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgacaaacgagatgagaaagagggagagctcaacgtgctggatgacatcctc
accgaggcccctgaccaggatgacgagctctataaccctgagagtgaacagcacgtcaac
cagaaaaaagggtctaagaggaagaacaaccgaggggataaccacgttctgaagcgtctg
cgacccacggctcacaccagacaggctactaagagatcggcccccttggctggggccagc
gggaagaagccagtcgactccaggaggggacggcacccctccgagtacgatactgatagt
tactatgaggacaggaagacccatcctataagagatggtggggcgcagagaggggagcct
cccaaagcagcccaccttgacaagcccctgggccgcaggaagacccatcctatgagagat
ggtggggcgcagagaggggagcctcccaaagcagcccaccctgacaagcccctgggccgc
aggagagagccagacagacacaggatcatgcctgagctcaccaccgagaagcagagtcct
cccagcgaggagcgcaaggtcagcccctctaaggaagagacagaagaagagggggcatca
gaccaggagacgggcagcacggccgagtcctccgagggacaccgatccaacgtggatgag
gagggagaagaagatgaagaggagggcgaggaggaagaatatgaggtgcaggaagtggat
cagagagccaagaatgctccaaatgattacgacattcgcagtgaagtcagtgactcccag
tctgagtctgtgtccttctctgagggggagtctgttctctccggctctgcctcggaggct
tcaggttctgagaaaacgcatgagaaactgtcgtcgtctgtccgcgccgtccgcaagaac
cagaacagcaagctgaagtacgtcatacgagacgcccgcttcttcatgatcaagagcaac
aaccacgagaacgtgtccctggccaaggcgaagggtgtgtggtccactttgcctgttaat
gagaagaagctgaacgccgccttccgttccgatcgcagtgtcatcctggtcttctccgtc
aaggagagtggcaagttccaaggttttgccaggctgtcctctgagtctcatcatggaggg
tctcccatccactgggtcctgcctgctgggatgaacgccaagatgctgggtggggtgttc
aagatcgactggatctgcagacgggagttgccgttcactaaaacggctcacctctccaac
tcgtggaacgaacacaagcctgtaaagatcggacgagacggacaggaaatggagccaggg
tgtgggatgcagctgtgtgtgacgttcccccaggacgagagcattaacttgtttcaagtt
attcataaaatgcgacacaagaggaggatgccttcggagccgcgctctcgaggacgcccg
ccgcacagagagcccacccgaggcgacatgggaagtttgcctaattcatgtaggggtcgg
ccagaggaaaatgccattcacaacaggaaacggcagaggattgattatccagcagagttt
ccacagagaccaggctttacactggaccctcgcaacccgccagttgaccggcggttcccc
actggagtgaggagagatgtttttctcaatgggtcctacaatgattacatgagagagttc
caccacaccgttgggcagcctactccttggcaaggaatggcaccgtaccctgggatggag
cagcaacctcaccacccgttctaccagcaccatcctcctcctccccagtcacacccaccc
tatgctgggcaacaccctgtaccacacgacgcccgcttcagagaacctgtaccacacgaa
gcccgcttcagagaacctgtaccacacgacgcccgcttcagagaacctgtaccacacgaa
gcccgcttcagagaacctgtaccacacgaagcccgcttcagagagaagagacttgtccgc
tcctatagctccagtgtgcatgactatgatatgcgtgtggatgacttcctgagacggacc
caggccgtggtgaccagtcgccgcagccgtccacgggaacgagacaggcaaagggagcga
gaacggcccagagatgcccgccgggaccgagatcgtggacgcgaccgggagagagacagg
gacagggagaaggagaaggagagggggcactacaggagataa
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