Oncorhynchus gorbuscha (pink salmon): 123999725
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Entry
123999725 CDS
T07892
Name
(RefSeq) integrin alpha-1-like
KO
K06480
integrin alpha 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123999725
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123999725
09142 Cell motility
04820 Cytoskeleton in muscle cells
123999725
04810 Regulation of actin cytoskeleton
123999725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
123999725
04515 Cell adhesion molecules [BR:
ogo04515
]
123999725
04090 CD molecules [BR:
ogo04090
]
123999725
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123999725
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin alpha subunits
123999725
CD molecules [BR:
ogo04090
]
Proteins
123999725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
Cupin_7
Motif
Other DBs
NCBI-GeneID:
123999725
NCBI-ProteinID:
XP_046161707
LinkDB
All DBs
Position
LG16:84341732..84433806
Genome browser
AA seq
1195 aa
AA seq
DB search
MVRQMQYLKFATALVLLPCVLSFNVDDKNGETFNGPLEDMFGYSVQQFENSEGKWVLIGS
PLAGQPAKRTGDVYKCRVGQGPNPRCIKLELPENTTIPNLHEVKENMTMGTTLVTNPQGG
FLACGPQYGYMCGQQTYISGVCTNVSSTFQVLNSIAPAVQECAKELDIVMVLDGSNSIWP
WTSIIDFLVKFLKNIEIGAKLSQVGIVSYGEKVTHNVNLSQFDTTQSLLAKVAKLPQQTG
FKTMTALGIDTARKEAFTVERGARPGVKKVMIIVTDGESHDFYNLDKVIKECEEDDIERF
GIAVLGDYNRNNRSLKEVKKFIEEIQSISSDPVGDHFFNVSDEFALLNIVDALGSRIFAL
EATSGNYTSSFEMEMSQAGFSAHTSKEGVMLGAVGAYEWNGTVVMHTNQGTVVPLNADFQ
DPLDEKKESLAEYVGYAVQSASTPNGELYITGAPRYNHTGRVIVYKLDGEIITVTQVLKG
EQIGSYFGSVLQTVDVDQDSYTDILLVGAPMFMGPEREEQGQVYVYKLNEGLFEHQTTLK
PDNQTCCTSAHSNGCTIVNTNGPCGARFGTAIAEVSDLDLDGNRDVAIGAPLENDHKGAV
YVYHGAKKTIKGKYVQRIPGPGDGVKTKFFGQSIHGVMDLNGDGIIDITIGGLGGASLFW
SKDVAELYANMTFDPNKINLQQPSEDCVLGERATVCVKTRVCFSYSVKSEKDHTNLGTAI
KYNLTLDSLRAKSRAAFVNPDEKSERKVQVTANIIDALCLEHSFAMKANLDFRDPIMISL
EFGLAEDTGPVLDGDLPTSLNKTIPLVDCGSDDKCIADLSLKAVPSIQSLVIKANKEKFH
VLITIRNSQDNAYNTKVMLSFTENINYVKVKANDKVCSLNNTKVECAVGYPFLKSNVEEV
FEILFEVNPAHIWKEIQINVTATSDSEELKTTLHDNSVRISIPVKYEAGLRFTADRHMKE
DHIIVKEGEQYPSIFNHTSVIGEEVTSVIGEEVKIIYTVKKDVNMETPPLKLRVMYPYLS
PRENILLYLTHVTSSQDVRCHIRDLINPLKINNNNTHTINPKKETLSVFLVGCKDHPCKS
FICSIPHVNNSQVNVTFRVWKPTFIKAEFSSLHMIVNATLENLNTDLFVLSATNYARDVK
IQVSKEALGGIPLWIIIVSILIGLLILALVIFALWKAGFFKRKSIEDMENEDMKN
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggtccggcaaatgcaatatttgaaattcgcgacagcactcgtgttgctaccgtgtgtg
ttgtcatttaacgtggatgacaagaatggggagactttcaatggtccgctggaggacatg
tttggatactcagtccagcagtttgagaacagtgaggggaagtgggtgctgattggttct
cccctggccggccagccagccaaacggactggagatgtctacaaatgccgtgtgggtcaa
ggaccaaaccctagatgtatcaaactggagctgcctgaaaacacaacaattcctaattta
cacgaagtcaaggaaaacatgaccatgggaacgacgttggttaccaaccctcaaggaggc
tttctggcctgtggtccacagtatggctacatgtgtggtcagcagacatacatctctggg
gtctgtaccaatgtcagctcaaccttccaggtgctcaactccatcgccccggctgtgcaa
gagtgtgccaaagagcttgacattgtcatggttcttgacggctccaacagtatctggccc
tggaccagcatcattgatttcctggtcaagtttctgaagaatatcgaaattggagctaaa
ctgtcccaggtgggcattgtgtcgtatggagagaaagtcactcacaatgtcaacctcagc
cagtttgataccactcaatccctcctggccaaagtggcgaaacttccccagcaaacaggt
ttcaagactatgaccgccctgggaattgacacggcgaggaaagaggccttcactgtggag
cgaggggcgcggccgggggtcaagaaggttatgataattgtgacggacggagagtcacat
gacttttataacctcgacaaggtcatcaaagaatgtgaggaggacgatatcgagaggttc
ggtatcgctgtgcttggtgattacaacaggaacaacagaagcctcaaggaggtgaagaaa
ttcattgaggagatccagtcgatctccagcgatcctgtgggagatcacttcttcaacgtg
tcggatgagtttgccttgctgaacatcgtagacgccctgggcagcaggatctttgccttg
gaggcaacgtcaggtaactacacctcgtcttttgaaatggagatgtcccaggctggattt
agtgcccacacctctaaagagggtgtgatgctaggtgctgtgggggcgtatgagtggaac
gggacagtagtgatgcataccaaccagggtaccgtggttcctctaaacgcagacttccaa
gaccccctggatgaaaagaaggagagcctggcggagtacgtgggttatgccgtacagtca
gcatcaacccctaatggtgaattatacatcacaggagcaccgcggtacaaccacacaggc
agagtcatcgtctacaaactggatggggaaatcatcacagtcacacaagtactgaaagga
gagcagattggctcctactttggcagcgtgctccagacggtggatgttgaccaggactcc
tacacagacatcctgctggtgggagctcctatgttcatgggcccagagagggaggaacag
ggacaggtgtacgtctacaaactcaatgagggcctatttgagcaccagaccacgctgaag
ccagacaaccagacgtgttgtacctcggcccactccaacggttgcaccatcgtcaacacc
aacggcccgtgtggcgcccgcttcggcaccgccatcgcagaggtcagtgacctagacctg
gacgggaaccgggacgtggccatcggggcgccactggagaacgaccacaaaggggcagtc
tacgtctaccatggagccaagaagaccatcaagggaaaatatgtgcagcgtatcccaggc
cctggagacggggtgaagactaagttctttggccagtcgatccacggagtcatggatctg
aacggagacggaattatagacattaccatcggagggctgggaggggcttctctgttctgg
tccaaggatgttgctgagctttatgccaacatgacctttgacccaaacaagatcaaccta
cagcagccctctgaagactgtgtgctgggtgaaagagccaccgtgtgtgtgaagaccagg
gtctgctttagctacagtgtcaagtctgagaaggaccacactaacttgggaacagccatt
aagtacaacctgactctggactctctgagggcaaagtcgagggcagcatttgtcaaccct
gacgagaagagtgagaggaaggtccaggtcaccgccaacatcatagacgctctgtgtctg
gaacattcctttgccatgaaggctaatctggacttcagagaccccatcatgatctccctt
gagtttggtctggctgaggacacaggccccgtcctggatggagacttaccaacgtcactc
aacaaaacgattcctttggtggattgtgggagcgatgacaagtgcatagctgacctatcc
ctgaaggctgtgccaagtatacaaagtcttgtgatcaaagccaacaaggaaaagttccat
gtgctcattaccattagaaacagtcaagacaatgcctacaataccaaagtcatgctcagc
tttactgaaaacataaactacgtcaaagtcaaggccaatgacaaagtctgcagtctgaat
aataccaaagttgagtgtgctgtgggatatccattcctcaaaagcaatgtagaggaggtg
tttgagatcctgtttgaagtcaaccctgcacacatctggaaagagattcagatcaacgta
actgcaaccagtgacagtgaggaattgaagaccaccctccatgacaactctgtgagaatc
tccatccctgtgaagtacgaggctggactcagattcactgctgacagacatatgaaggag
gaccacataatagtgaaagagggagaacagtaccccagcatcttcaaccacaccagtgtg
ataggagaagaggtcaccagtgtgataggagaagaggtcaagatcatctatacggttaaa
aaggatgtgaatatggaaactcctcctctaaagctgagggtgatgtacccgtacctatca
cctagagagaacatcctgctatacctgacacatgtcacctcctcacaggatgtgagatgt
cacatcagggacctgattaaccctttaaagatcaacaacaacaacacacacaccatcaat
cctaaaaaagagaccctcagtgtcttcctggtgggctgtaaggaccacccgtgtaagtca
tttatctgctccatccctcacgtcaacaacagccaggtcaatgttaccttcagggtgtgg
aagcccacctttatcaaagcagagttctccagccttcacatgattgttaatgccactctg
gagaacctgaacactgatctcttcgtgttgagtgccaccaattacgccagagatgtgaag
atccaggtctctaaagaggctttgggaggtataccactgtggatcattatagtcagtatc
ctcataggactgctgattctggcactggtcatcttcgctctatggaaggctggatttttc
aagagaaaatccatagaggacatggagaacgaggacatgaagaattaa
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integrated database retrieval system