KEGG   Oncorhynchus gorbuscha (pink salmon): 123999725
Entry
123999725         CDS       T07892                                 
Name
(RefSeq) integrin alpha-1-like
  KO
K06480  integrin alpha 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04810  Regulation of actin cytoskeleton
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    123999725
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    123999725
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    123999725
   04810 Regulation of actin cytoskeleton
    123999725
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    123999725
   04515 Cell adhesion molecules [BR:ogo04515]
    123999725
   04090 CD molecules [BR:ogo04090]
    123999725
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   123999725
Cell adhesion molecules [BR:ogo04515]
 Integrins
  Integrin alpha subunits
   123999725
CD molecules [BR:ogo04090]
 Proteins
  123999725
SSDB
Motif
Pfam: VWA Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 Integrin_A_Ig_1 VWA_2 FG-GAP_3 FG-GAP_2 Cupin_7
Other DBs
NCBI-GeneID: 123999725
NCBI-ProteinID: XP_046161707
LinkDB
Position
LG16:84341732..84433806
AA seq 1195 aa
MVRQMQYLKFATALVLLPCVLSFNVDDKNGETFNGPLEDMFGYSVQQFENSEGKWVLIGS
PLAGQPAKRTGDVYKCRVGQGPNPRCIKLELPENTTIPNLHEVKENMTMGTTLVTNPQGG
FLACGPQYGYMCGQQTYISGVCTNVSSTFQVLNSIAPAVQECAKELDIVMVLDGSNSIWP
WTSIIDFLVKFLKNIEIGAKLSQVGIVSYGEKVTHNVNLSQFDTTQSLLAKVAKLPQQTG
FKTMTALGIDTARKEAFTVERGARPGVKKVMIIVTDGESHDFYNLDKVIKECEEDDIERF
GIAVLGDYNRNNRSLKEVKKFIEEIQSISSDPVGDHFFNVSDEFALLNIVDALGSRIFAL
EATSGNYTSSFEMEMSQAGFSAHTSKEGVMLGAVGAYEWNGTVVMHTNQGTVVPLNADFQ
DPLDEKKESLAEYVGYAVQSASTPNGELYITGAPRYNHTGRVIVYKLDGEIITVTQVLKG
EQIGSYFGSVLQTVDVDQDSYTDILLVGAPMFMGPEREEQGQVYVYKLNEGLFEHQTTLK
PDNQTCCTSAHSNGCTIVNTNGPCGARFGTAIAEVSDLDLDGNRDVAIGAPLENDHKGAV
YVYHGAKKTIKGKYVQRIPGPGDGVKTKFFGQSIHGVMDLNGDGIIDITIGGLGGASLFW
SKDVAELYANMTFDPNKINLQQPSEDCVLGERATVCVKTRVCFSYSVKSEKDHTNLGTAI
KYNLTLDSLRAKSRAAFVNPDEKSERKVQVTANIIDALCLEHSFAMKANLDFRDPIMISL
EFGLAEDTGPVLDGDLPTSLNKTIPLVDCGSDDKCIADLSLKAVPSIQSLVIKANKEKFH
VLITIRNSQDNAYNTKVMLSFTENINYVKVKANDKVCSLNNTKVECAVGYPFLKSNVEEV
FEILFEVNPAHIWKEIQINVTATSDSEELKTTLHDNSVRISIPVKYEAGLRFTADRHMKE
DHIIVKEGEQYPSIFNHTSVIGEEVTSVIGEEVKIIYTVKKDVNMETPPLKLRVMYPYLS
PRENILLYLTHVTSSQDVRCHIRDLINPLKINNNNTHTINPKKETLSVFLVGCKDHPCKS
FICSIPHVNNSQVNVTFRVWKPTFIKAEFSSLHMIVNATLENLNTDLFVLSATNYARDVK
IQVSKEALGGIPLWIIIVSILIGLLILALVIFALWKAGFFKRKSIEDMENEDMKN
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggtccggcaaatgcaatatttgaaattcgcgacagcactcgtgttgctaccgtgtgtg
ttgtcatttaacgtggatgacaagaatggggagactttcaatggtccgctggaggacatg
tttggatactcagtccagcagtttgagaacagtgaggggaagtgggtgctgattggttct
cccctggccggccagccagccaaacggactggagatgtctacaaatgccgtgtgggtcaa
ggaccaaaccctagatgtatcaaactggagctgcctgaaaacacaacaattcctaattta
cacgaagtcaaggaaaacatgaccatgggaacgacgttggttaccaaccctcaaggaggc
tttctggcctgtggtccacagtatggctacatgtgtggtcagcagacatacatctctggg
gtctgtaccaatgtcagctcaaccttccaggtgctcaactccatcgccccggctgtgcaa
gagtgtgccaaagagcttgacattgtcatggttcttgacggctccaacagtatctggccc
tggaccagcatcattgatttcctggtcaagtttctgaagaatatcgaaattggagctaaa
ctgtcccaggtgggcattgtgtcgtatggagagaaagtcactcacaatgtcaacctcagc
cagtttgataccactcaatccctcctggccaaagtggcgaaacttccccagcaaacaggt
ttcaagactatgaccgccctgggaattgacacggcgaggaaagaggccttcactgtggag
cgaggggcgcggccgggggtcaagaaggttatgataattgtgacggacggagagtcacat
gacttttataacctcgacaaggtcatcaaagaatgtgaggaggacgatatcgagaggttc
ggtatcgctgtgcttggtgattacaacaggaacaacagaagcctcaaggaggtgaagaaa
ttcattgaggagatccagtcgatctccagcgatcctgtgggagatcacttcttcaacgtg
tcggatgagtttgccttgctgaacatcgtagacgccctgggcagcaggatctttgccttg
gaggcaacgtcaggtaactacacctcgtcttttgaaatggagatgtcccaggctggattt
agtgcccacacctctaaagagggtgtgatgctaggtgctgtgggggcgtatgagtggaac
gggacagtagtgatgcataccaaccagggtaccgtggttcctctaaacgcagacttccaa
gaccccctggatgaaaagaaggagagcctggcggagtacgtgggttatgccgtacagtca
gcatcaacccctaatggtgaattatacatcacaggagcaccgcggtacaaccacacaggc
agagtcatcgtctacaaactggatggggaaatcatcacagtcacacaagtactgaaagga
gagcagattggctcctactttggcagcgtgctccagacggtggatgttgaccaggactcc
tacacagacatcctgctggtgggagctcctatgttcatgggcccagagagggaggaacag
ggacaggtgtacgtctacaaactcaatgagggcctatttgagcaccagaccacgctgaag
ccagacaaccagacgtgttgtacctcggcccactccaacggttgcaccatcgtcaacacc
aacggcccgtgtggcgcccgcttcggcaccgccatcgcagaggtcagtgacctagacctg
gacgggaaccgggacgtggccatcggggcgccactggagaacgaccacaaaggggcagtc
tacgtctaccatggagccaagaagaccatcaagggaaaatatgtgcagcgtatcccaggc
cctggagacggggtgaagactaagttctttggccagtcgatccacggagtcatggatctg
aacggagacggaattatagacattaccatcggagggctgggaggggcttctctgttctgg
tccaaggatgttgctgagctttatgccaacatgacctttgacccaaacaagatcaaccta
cagcagccctctgaagactgtgtgctgggtgaaagagccaccgtgtgtgtgaagaccagg
gtctgctttagctacagtgtcaagtctgagaaggaccacactaacttgggaacagccatt
aagtacaacctgactctggactctctgagggcaaagtcgagggcagcatttgtcaaccct
gacgagaagagtgagaggaaggtccaggtcaccgccaacatcatagacgctctgtgtctg
gaacattcctttgccatgaaggctaatctggacttcagagaccccatcatgatctccctt
gagtttggtctggctgaggacacaggccccgtcctggatggagacttaccaacgtcactc
aacaaaacgattcctttggtggattgtgggagcgatgacaagtgcatagctgacctatcc
ctgaaggctgtgccaagtatacaaagtcttgtgatcaaagccaacaaggaaaagttccat
gtgctcattaccattagaaacagtcaagacaatgcctacaataccaaagtcatgctcagc
tttactgaaaacataaactacgtcaaagtcaaggccaatgacaaagtctgcagtctgaat
aataccaaagttgagtgtgctgtgggatatccattcctcaaaagcaatgtagaggaggtg
tttgagatcctgtttgaagtcaaccctgcacacatctggaaagagattcagatcaacgta
actgcaaccagtgacagtgaggaattgaagaccaccctccatgacaactctgtgagaatc
tccatccctgtgaagtacgaggctggactcagattcactgctgacagacatatgaaggag
gaccacataatagtgaaagagggagaacagtaccccagcatcttcaaccacaccagtgtg
ataggagaagaggtcaccagtgtgataggagaagaggtcaagatcatctatacggttaaa
aaggatgtgaatatggaaactcctcctctaaagctgagggtgatgtacccgtacctatca
cctagagagaacatcctgctatacctgacacatgtcacctcctcacaggatgtgagatgt
cacatcagggacctgattaaccctttaaagatcaacaacaacaacacacacaccatcaat
cctaaaaaagagaccctcagtgtcttcctggtgggctgtaaggaccacccgtgtaagtca
tttatctgctccatccctcacgtcaacaacagccaggtcaatgttaccttcagggtgtgg
aagcccacctttatcaaagcagagttctccagccttcacatgattgttaatgccactctg
gagaacctgaacactgatctcttcgtgttgagtgccaccaattacgccagagatgtgaag
atccaggtctctaaagaggctttgggaggtataccactgtggatcattatagtcagtatc
ctcataggactgctgattctggcactggtcatcttcgctctatggaaggctggatttttc
aagagaaaatccatagaggacatggagaacgaggacatgaagaattaa

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