Oncorhynchus gorbuscha (pink salmon): 123999726
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Entry
123999726 CDS
T07892
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123999726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
123999726
Transporters [BR:
ogo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123999726
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123999726
NCBI-ProteinID:
XP_046161708
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Position
LG16:42160155..42184837
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AA seq
612 aa
AA seq
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MNYNEKKDPKLQMMPSTANGQAKLKELEVRGNWGSKAEYILTVMGAIIGPGNVWRFPYLC
YKNGGGVFFIPYVLFLVTCGIPLFFLETSLGQYTSQGGITCWRKMCPLFEGMGYACNLVI
SFSAISYIVILAWAFFYLFSSFSAELPWASCGNWWNTDSCMDDSKQNRSTNLTSRQNTTL
PVMEFWERRVLNISGGIEEMGNIRWELALCLLLTWVICYFCVWKGIKSTGKATYFTATFP
YAMLLVLLIRGVTLPGAIDGIIFYIYPDISRLTDPQVWMDAGTQIFFSYAISLGFLTSLG
SYNSYNNDCYKDCFYLCLLNSGTSIVSGFAIFSVLGFMTYEQGVSIEEVAESGPGLAFIV
YPRAVAMMPMSQIWSACFFIMIILLGLDSQFVGLECLMTSVVDLFPTYLRREFRRELLLL
AICTIGFILGLALVTEGGMYLLQLLDHHVCSGTTLLLLAFCQSVCIAWVYGAERFYGNIS
DMIGYRPLPLMKYCWLYITPTVCTATFIFSIVKYSPLKFSNTYVYPVWANIIGWFIATIS
LSFIPLWMVYKMANSNGTLRQRFSVLCRPVDDLPANRTCRTDGPLHLATSDVMSSSMELK
PLSFTAGDKDAL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaacgagaagaaagaccccaaactgcaaatgatgcccagcacagccaatggc
caagcaaaactaaaggagctggaagtgcggggaaactgggggagtaaagccgagtatatt
ttaacggtgatgggagctataattggacctggaaacgtgtggagattcccttacttgtgt
tacaaaaacggagggggtgtgttcttcattccatatgttttgttcttggtgacgtgcggg
atcccgctattcttcctggagacttctctgggacaatacaccagccagggaggaatcaca
tgttggaggaagatgtgtccgctatttgagggtatgggctacgcctgtaaccttgtcatc
tcattcagtgccatctcctacattgtgatcttggcatgggcctttttctatctcttctcc
tccttcagtgcagagctaccctgggcaagctgcggaaactggtggaacactgactcatgc
atggatgacagcaagcagaatcgcagcaccaacctgacatcaagacaaaataccacacta
ccagtcatggagttttgggagcgcagggtgctgaacatttccggggggatcgaggagatg
ggcaacatcagatgggagctggcgctgtgtctccttctcacctgggtcatctgttacttc
tgtgtctggaagggaattaagtccacaggcaaggctacttactttacggccacattccca
tatgccatgctcctggtcctgctgatccgcggtgtcactctgcctggagccatagacggc
atcatcttttacatttaccctgacatctctcgcctcacagacccacaggtgtggatggat
gcaggcacacagattttcttctcctatgctatcagcttgggctttctcacatccctgggc
agctacaacagttacaacaacgactgctacaaggactgtttttacctgtgtcttctaaac
agtggcaccagcatcgtgtcaggcttcgcaatcttctctgttttgggcttcatgacctat
gaacagggggtgtccattgaagaggtggctgagtcaggtcctgggctggcatttattgtg
taccctcgagcagtagccatgatgcccatgtctcagatctggtctgcctgtttcttcatc
atgatcatccttctgggtctggatagtcagtttgttgggctggagtgtttgatgacatct
gttgtggatctgttccctacctatctgcgccgtgagttcaggagagagctgctgttgctg
gctatctgcacaataggcttcatactggggcttgccctggtcacagagggagggatgtac
ctgcttcagctgctagaccaccatgtgtgcagtgggaccaccctgctactgctggccttt
tgtcagtctgtctgcattgcctgggtctatggtgctgaacgtttctatggtaacatcagt
gatatgattggctacagacctctgcctttgatgaagtactgctggctctacatcactcct
acagtgtgcacagctaccttcatcttctccatagtcaagtactcaccattgaagttcagc
aacacatatgtttatcctgtctgggctaacatcattggctggttcattgccactatctcc
ctctccttcatcccactatggatggtctacaaaatggccaacagcaatggaaccctgcgc
cagcgattctctgtgctctgtcggcctgtagacgacctccccgcgaaccgcacatgcaga
acagatggccctcttcatctggcgacctctgacgtcatgagctccagcatggagctgaag
cctctgtccttcacagcgggagataaggacgcactgtga
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