Oncorhynchus gorbuscha (pink salmon): 123999801
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Entry
123999801 CDS
T07892
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123999801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123999801
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
123999801
Endosome - Golgi transport
Arf GTPase associated proteins
123999801
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
123999801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_6
RA
PH_3
GAP1-M
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
123999801
NCBI-ProteinID:
XP_046161779
LinkDB
All DBs
Position
LG16:68411305..68426509
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AA seq
1134 aa
AA seq
DB search
MNELFVSDVMADQEDSLRAMQNCFRSQFSMEEVECEDIEASRTTSSVDEDSIYLACTLSR
SYDLGDSDLHHTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIAI
LFVTDVLNVGEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQRRSSMEMSLMNFSF
TSGQRDSGVSLISKQGYLEMNGLRSKVYVVICADRVFLYGNAEEHSQGVGITYIEMNVGT
VKSTDKRAFNLTTFYRTFSFLAESAQQRDQWVEALQDCVSRSLSSDVVAQKIWAVEANQR
CADCGAPHPDWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDEKVWTDNLIQVFLLGN
NRVNLFWAANTPPSEALQPSSDSEKRQRFVSAKYCQGKYRRYHALFGQQEALNKALCSTV
QTDDVLETLSLVFCGADVNCYTGDPELPSPVSVAQHYGQILQVEFLTHNHNTDLPGSRAG
NHTLLEAALPVSHTGYLFKTASSIRPVTECKAKGDFSRRWCSLNQGNFSYYESEKSSSQS
GGMKMSDVLCLLVNPPGKHGYAHSFELYHDSGRVYLFGEDSSDKVKGWIKAIAKALVPSA
AEDLVCWPFARVGRLSYTEGQSHHSPLLGWFSLGAPDCSYSSTEQIEWRTSTSMEQEAGA
GAVVLVDGGRSLRVEGDRRPDFQGWLSGLQQGSGRGDGPLDQQQLTDTDVPVIVDRCMSY
ITQHGLKSEGIYRRCGVNSKIAALLFFLRQNARQVRLNEGERQVDDVANVLKRFLREVGE
GVFNGHEASLPWLHTTTVSEMSERVSQYQALLHSLPRVNRATLGAVINHLYCVQCFADEN
QMNMHNLAIVFGPTLFQTDGTDNSAGQVVEDLIQNYQDIFNVDAEQFQRQLDMISHVIKA
QKEHTEEGSPSPLTICGVYLERKEEGSELLVQISQEVSAEELVCKVLRRRNIPPQQGDYW
SCFLVDNNQEIERPLHYQEQALTIYFSLGKDCHLVVKKNCYMEAILTYIAGRVDVSRNGL
IKFCEEKGQRGKGTFSRRLCVLSGLSLRLYKDVKSSQPERECQIHALKVYCGIKRKLQPP
SCWGMTVVCEKAVRDIQQWYLCCESKSELIEWLATFMSLRHDGDLWPAASRLDS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttattcgtctcagatgtcatggcagaccaggaggattcattgagagctatg
cagaactgcttccgcagtcagtttagtatggaggaggttgagtgtgaagacattgaagcg
agcaggacaacatcatcggttgatgaagacagtatctatcttgcctgcacactgtcacga
tcatacgacctcggagactctgatcttcaccatactcctgttatcaagatgggctggctg
gacaagaccccacctcaggggagccttattttccagaagcgttgggtgatgttggatgca
cagtacctgcgatactttcaaaatgagaaggaggtctactcaaagcggatcatagccata
ctgtttgtcactgacgtgcttaacgttggagagcagaagtttgaggtggtgacaaggaac
aggactttcttgttccgtgcagaaaacaacactgtcagggaggaatgggtgtcagtactg
aaagaaactattcagcagcgtcgtagcagcatggagatgtcccttatgaacttcagtttt
actagtggacagcgtgatagtggagtctctctcattagtaaacaaggatacctggagatg
aatggactgcgctccaaggtctatgtagtcatctgtgctgacagggtcttcctctacggg
aacgctgaggagcacagccagggtgttggcatcacctacattgagatgaatgtgggtact
gtgaagagcacagacaaacgggccttcaacctcaccaccttctacagaacattcagtttc
ctggccgagtcggcgcagcagagggatcagtgggtggaggccctgcaggactgtgtcagt
cgctctctgtccagcgatgtggtggcccagaagatctgggctgtggaggccaaccagcgc
tgtgcagactgtggcgccccccatccagactgggcctctgtcaacctctgtgtggtcctt
tgcaaatgctgtgcaggcgtgcacaggggtctgggccagagtgtgtccaaagttcgcagt
ctgagaatggatgaaaaggtgtggactgataaccttattcaggtgttcctgttaggtaac
aacagggtaaacctgttctgggcagctaacacaccaccaagcgaggcgctccaaccatca
agtgatagtgagaagcgccagcgctttgtctctgctaagtactgtcaggggaaatatcgc
cgctaccatgctctgtttggccaacaggaggccctcaacaaagctctgtgcagtaccgtt
cagacggatgatgtattggagactctgtctctggtgttctgtggagcagatgtgaactgt
tatacaggtgatccagagttgcccagccctgtgtctgtggcccaacactatggacagata
ttacaggtggagttcttaactcacaaccacaacacagatctgccagggtctagggctgga
aatcacacactcctagaggctgctctccctgtctcacacactggttatctcttcaagacc
gcttcttcaatacggccagtaacagagtgcaaagcaaaaggagattttagccgtcgctgg
tgctctctgaaccaaggtaacttcagctactatgagagtgagaagagctccagtcagagc
ggcgggatgaagatgagtgatgtcctgtgtctgttggtcaatcccccagggaaacatggt
tatgcccattcctttgagctgtaccatgactctgggagagtctatctatttggagaagac
tcatctgacaaagtgaaagggtggatcaaggccatcgccaaggcgctggtcccctctgca
gcagaggacctggtgtgctggccctttgcgagggtgggtcggttgagctacactgagggc
cagagccaccatagccccctcctgggctggttctccctgggggctccagactgctcctac
tcctccacggagcagatcgagtggagaacatcgacctccatggagcaggaggctggtgct
ggtgctgtggtgctggtggacggaggcaggagcctgcgtgtggagggggacaggaggcct
gacttccagggctggctgagtgggctccaacagggctcagggagaggagatggccccctg
gaccagcagcagctcactgacacagacgtccctgtcatcgtggaccgctgcatgagctac
atcacacagcatggtttgaagtcagagggcatctatcggaggtgtggtgtgaactccaag
atcgccgccctgctgttctttctccgccaaaacgcccggcaggtccgtctgaatgaaggg
gagcgccaggtggatgacgtggcaaacgtcctgaagaggttcctcagggaagtgggagag
ggggttttcaatggccatgaggcctctctgccatggctccacaccactactgtcagtgag
atgagtgagagagtgtcccagtaccaggccctcctccacagcctcccccgagtcaacaga
gccactctgggggctgtcatcaaccacctctactgcgtccagtgctttgcagatgagaat
cagatgaacatgcacaacctggccattgtgtttggtcccacgctcttccagacggacggc
actgataacagcgcaggacaggtggtagaggatctcatccagaactaccaggacatcttc
aatgtggatgcagagcagtttcagagacagttggacatgatctcgcatgtcatcaaagca
cagaaggaacacacagaggagggaagcccctcacctctcaccatctgcggggtttacctg
gagaggaaggaggagggctctgagctgctggttcagatctcccaggaagtgagtgctgaa
gagctggtatgtaaggtcctgagacgcaggaacatccctccacagcagggggactactgg
agctgcttcctggtcgacaacaaccaggagatagagcgtccattgcactatcaggagcaa
gcgctgactatctatttctctctgggtaaagactgccatctggtggtcaagaagaactgc
tacatggaggccattcttacctacatagcaggcagggtagatgtctcccgaaacggcctg
atcaagttctgtgaagagaaaggtcaaaggggtaagggaaccttcagcagacgcctctgt
gtgctcagtggcttgtctctaaggctgtacaaagatgtgaagagttctcagcctgagagg
gagtgtcaaatccacgctctgaaggtctactgtggtatcaagaggaagttacagccaccg
tcatgctgggggatgactgtagtgtgtgagaaggcagtacgagacatacagcaatggtac
ctgtgctgtgaatcaaagagcgagctgatcgagtggctggccacttttatgagcctccgg
catgatggcgatctgtggccagcagcttccaggctagattcctga
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