Oncorhynchus gorbuscha (pink salmon): 123999856
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Entry
123999856 CDS
T07892
Name
(RefSeq) desmin-like
KO
K07606
vimentin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123999856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123999856
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
123999856
04147 Exosome [BR:
ogo04147
]
123999856
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
123999856
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
123999856
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123999856
Exosomal proteins of other cancer cells
123999856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Spc7
CC_Bre1
DUF1664
DivIC
HH_AprE
TPR
COLEC12
TPR_MLP1_2
DUF4407
Motif
Other DBs
NCBI-GeneID:
123999856
NCBI-ProteinID:
XP_046161820
LinkDB
All DBs
Position
LG16:88009465..88012368
Genome browser
AA seq
725 aa
AA seq
DB search
MRGSSYSQKSQSLQVSGARSSMRVQSPSPSRCRGSSYNNRGRSGYQDGHVSSAVELGTEI
HQVHANEKEAMQELNVRFAGYIEKVQALEQRNALLMAELAALQGRFKGGPTGIGEEYNLK
FKEMRELIEALTNEKGAADIERGYIEEEVEVWRMKLEEELALKEEAEMILREFRQDVDNA
TLQKAELEKSVEQLVAEIEFLKKLHDEEVADLMKQIEDSKVTAEVDGDRPDLAAYLRNMR
AEIETVAAKNVQEAEKWYKGKFETLKEVAGKKEEQMKSMKEEITTFHNQVTDLQNQIDGL
RARNAALEQQLEDMEMAHMDKVGGLEGIIAQLEHQLCETKMEMGKYLADYQELLHIKLKL
DAEIAVYRKLLEGEESRLGISLSQRTTSMSCSVETHQLPDGLPEHPTFSPTTKLVNSPYL
HSSVPPTRPPYQPPPSFCPYTLSTPSTFHHTFPTSPPVNLPPPPPSPARPCQPPTTTSSQ
PAHPSTPPPHPSPARPCQPPTTTSSQPTHPCQPHPLLPTSPPLSTPPPPPNQPAPVSPPP
PPPPKQPAPVSPPPPPPNKPTPVNPTSSSQPACPCQPHHLLPSSPPLSAPHHPLLPTSPP
LSAPHHPLLPTSPPLSAPHHPLLPTSPPLSAPHHPSSQPARPCQPPTTPSSQPARPCQPP
TTPSSQPARPCQPPTTPSSQPARPCQPPTTPSSQPARPCQPPTTPSSQPARPCQPLSCHA
VLPYG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagaggatcttcctattcccagaaatcccagtccctgcaggtgagtggggcacgcagc
agtatgcgagttcagagcccctctccctcccggtgccgtggatcctcgtacaacaaccgt
ggacgctccggatatcaggacggccacgtgtcctcggctgtggagttgggcacagagata
caccaggtccatgccaacgagaaggaggcgatgcaggagctaaacgtgaggtttgcaggc
tacatcgagaaagtccaggcccttgaacagaggaacgccctgctgatggccgagctggct
gcgctacagggccgcttcaagggaggccccaccggtatcggagaagagtacaacctcaag
ttcaaggagatgagggagctgatcgaagccttgaccaatgagaagggagctgctgatatc
gagaggggatacattgaggaggaggtggaggtgtggagaatgaaactggaagaggagctg
gcactgaaagaggaggcagagatgatcctgagggaattccgtcaagacgttgacaatgcc
actctgcagaaggctgagctcgagaagagtgtcgaacagctggtggccgagattgagttc
ctcaagaagttgcatgacgaggaagttgccgacctcatgaagcagatcgaggactccaag
gtgaccgcggaagtcgacggtgaccgccccgacctcgccgcctacctccgcaacatgcga
gccgagatcgagactgtggcggccaagaacgtccaggaagccgagaagtggtacaagggc
aagtttgaaaccctcaaagaagtcgctggcaagaaagaagagcagatgaagtcgatgaaa
gaagagatcaccaccttccacaaccaggtgacagacctccagaaccagatcgacgggctg
agggcgagaaacgcagccctggagcagcagctggaggacatggagatggcccacatggat
aaggttggaggcctggagggcatcattgcccagctggaacaccagctctgcgagaccaag
atggagatgggcaagtacctggccgactaccaagagctgctgcacatcaagctgaagctg
gacgctgaaatcgccgtctacaggaagctgctggagggagaggagagcaggctggggatc
tctctgtcacagaggaccacctcaatgtcctgcagtgtggagactcaccagctgccagac
ggtctgcctgagcaccccacgttctcccctaccaccaagcttgtcaactccccctacctt
cactcctctgttccacctacccgcccaccctatcagcccccaccctctttctgcccctac
acactgtcaacccctagcacattccatcacaccttcccaaccagcccacccgtcaacctc
ccaccacctcctcccagtcctgcccgcccctgtcagccccccaccaccacctcctcccaa
ccagcccacccgtcaaccccaccccctcatcccagtcctgcccgcccctgtcagcccccc
accaccacctcctcccaaccaacccacccctgtcaaccccaccccctcctcccaaccagc
ccacccctatcaaccccaccacctcctcccaaccagcccgcccctgtcagccccccacca
ccacctcctcccaaacagcccgcccctgtcagccccccaccacctcctcccaacaagccc
acccctgtcaaccccacctcctcctcccaaccagcctgcccctgtcagccccaccacctc
ctcccatccagcccacccctgtcagccccccaccaccccctcctcccaaccagcccgccc
ctgtcagccccccaccaccccctcctcccaaccagcccgcccctgtcagccccccaccac
cccctcctcccaaccagcccgcccctgtcagccccccaccacccctcctcccaaccagcc
cgcccctgtcagccccccaccaccccctcctcccaaccagcccgcccctgtcagcccccc
accaccccctcctcccaaccagcccgcccctgtcagccccccaccaccccctcctcccaa
ccagcccgcccctgtcagccccccaccaccccctcctcccaaccagcccgcccctgtcag
ccccccaccaccccctcctcccaaccagcccgcccctgtcagcccttgtcatgtcacgct
gtgctgccgtatggttaa
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