Oncorhynchus gorbuscha (pink salmon): 123999913
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Entry
123999913 CDS
T07892
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03020
RNA polymerase
ogo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123999913
09124 Replication and repair
03420 Nucleotide excision repair
123999913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
123999913
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123999913
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123999913
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123999913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
123999913
NCBI-ProteinID:
XP_046161899
LinkDB
All DBs
Position
LG16:58783331..58786598
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIRQQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccaccggcattcgagtcatttctgttgtttgaaggggaaaagaaaatcaca
atcatcaaggacacaaaagtccctaacgcctgcctcttcacgttgaacaaagaggatcac
acgcttggtaacatcatcagacaacaacttctgaaagacccccaagtgctatttgctggc
tacaaggtccctcatccgctggagcacaagattgtgatccgtgttcagaccacaccagac
tacagtcctcaggaggctttcactaatgcaatcactgacctcatcagtgagctgtccttg
ttggaggagcgattcagggttgcaattaaagacaagcaagaaggaattgaatga
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