Oncorhynchus gorbuscha (pink salmon): 123999925
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Entry
123999925 CDS
T07892
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123999925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
123999925
Transporters [BR:
ogo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123999925
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123999925
NCBI-ProteinID:
XP_046161921
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Position
LG16:complement(50058388..50072502)
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AA seq
576 aa
AA seq
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MNVETREGKREQWSSKTEFLLTVCGNVVGLGNVWRFPYLCYKNGGGAFLLPYLLYVGLCG
LPLFLLETSIGQYTQQGIVTCWRSLCPLAEGVGRAELLILIYDSIIYLVILAWTLFYLVF
SFSSQLPWASCGNTWNTDQCVDFTSLNHTANCTSNITTTSASTEFWERRVLAISGGIEEV
GSVRWELMLCLLACWAVCYFCIWKGIRYSGKVVYFTATFPYLMLLVLLVRGLTLPGAWEG
IQFYLYPDPVRLADPQVWMEAGTQVFFSYCIGRGSQTVLGSFNKYNNNCYMDSFWLCLLN
GCTSFVAGFAVFSVLGFMAQKQGVSVAMVAESGPGLAFIAFPQAAAMMPLPQLWTVCFFI
MLLLLGIDTQFVIMEGVITSFTDLFPVTLRRPRYREGFVLLFCLSCFLIQLTLITEGGIF
VFQLIDYYGCSGACVLFVAVFESLAVGWIFGADHMEDAIKDMTAQKPCVLFRLCWRYFTP
LVSLSSFILHMVDYKPLKFNRWYMYPDWAYALGWAMALSSILLVPLWGIGKICIGTGSLR
QRLAVLCHPDDDLPLNRQGKCQNSEMETLQDINKHI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggagactcgggaagggaagagggaacagtggagctctaaaacagagttcctc
ctcacagtttgtggtaacgtggtcggcctgggaaatgtatggaggttcccctatctctgc
tataagaacggtggaggtgccttccttctgccctacctgctgtacgttgggctatgtggt
cttcctctgttccttctcgagacatcaattggtcagtacacccaacagggcattgtcaca
tgctggaggagcttatgtccgcttgctgaaggtgttggcagggcagagcttctcatcctg
atctatgattctatcatttacctcgtgatcctggcctggactctcttctacctggtgttc
tctttcagttctcagctaccctgggccagctgtggtaacacctggaacacagatcaatgt
gtggatttcacttcactaaaccatactgccaactgtacctccaacatcaccactacttct
gcttccactgagttctgggagcgtcgtgtgttggctatctctggaggcattgaagaggta
ggcagtgtaagatgggagctgatgctctgtctcctcgcctgttgggctgtctgctacttc
tgtatctggaaaggaatcaggtactcaggaaaggtggtgtatttcactgccacatttccc
tatctgatgctcttggtgttgctggtgagagggttgactttacctggagcttgggagggg
attcagttttacctgtatccagacccagtccgccttgcagacccccaagtctggatggaa
gcaggaacgcaggtgttcttctcctactgtattggacggggaagtcaaactgttttggga
agcttcaacaaatacaacaataactgttacatggacagcttttggctgtgtctgctgaat
ggttgtaccagttttgtggctggatttgcagtcttctcggtgctgggattcatggcacag
aaacagggtgtttctgttgcgatggtggcagagtcaggtcctggtttggcattcatcgcc
ttcccccaggcagcagccatgatgcccttgccacagctctggacggtctgcttcttcatt
atgcttcttctgctgggaattgacacacagtttgtcataatggagggagtgataacatct
ttcacagacttatttcctgttacactgcgaaggccccgatatcgagagggctttgtgctc
ctcttctgtctctcctgcttccttatacagctgactctgatcacagagggtgggatcttt
gtgttccagctcattgattactacggctgcagcggagcgtgtgttctctttgtggctgtg
tttgagtcactggcagtgggatggatctttggggcagatcacatggaggatgccattaag
gacatgactgcacagaaaccgtgtgtcctcttcagactgtgctggcgttacttcacccca
cttgtgtctctgagttcctttattttacacatggtggactataaacctctcaagtttaac
cgctggtacatgtacccagactgggcctatgcactgggctgggccatggccctctcctcc
atcctcctggtgccactgtgggggattggcaagatctgcattggcacaggcagcctcaga
cagcgcttggctgtcctttgtcaccccgatgacgacctccctctaaaccggcaggggaaa
tgccaaaactcagaaatggagacattgcaagatattaacaagcacatttga
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