Oncorhynchus gorbuscha (pink salmon): 123999996
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Entry
123999996 CDS
T07892
Symbol
srebf1
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
123999996 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123999996 (srebf1)
04131 Membrane trafficking [BR:
ogo04131
]
123999996 (srebf1)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
123999996 (srebf1)
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
123999996 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
123999996 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
123999996
NCBI-ProteinID:
XP_046162018
LinkDB
All DBs
Position
LG16:5630046..5667563
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AA seq
1172 aa
AA seq
DB search
MNLSFDDQSLDNLDPTISLNDPSDIDTALLNDIDDMLQLINTQDMVEFNQDMAGLFDPPQ
FTGVTPTQDLPALSLPHSTTSPPSNTSSILSSSPHLDALLGPPIIRSSSPPDKAFXPPTF
QQSPLAQVTTSTPVPLPRPQPAPQQGSPSAQAAQGLRQPKVDLPLPVLSPAPVPVQLPPP
ASSPHTVPGQSPVFSAAPQALFTSPALQQSQAHTQQIRINYSTQNGYKAVNHQGGPAQPM
VSLPSSPSGVQPMTIQALTTTAPILTTSASPPAQTIASHHIQQVLLQPQFIKAESLLLTT
LNRDPCMVTTVASPCITSLATTTSQTTHSLQALMSGGTFLTTVPVMMDSDKLPINRITIS
SKPMGLPPKGEKRTAHNAIEKRYRSSINDKILELKDLVAGTEAKLNKSAILKKAIDYIRY
LQQSNQKLKKENMALKMSAQKNKSLKDLVAMEVDGPQTDVKSELPTPPPSDVGSPTSYSH
CGSDSEPDSPMGEDSKPAVNLMDTSASTPGSAGMLDRSRMALCTFTFLFLSLNPLAAMLC
GGMGSSTTANNQAVHPGTGRIMLGLDNAADSWGWMDWVLPTLLVWLLNGVLVAGVLVRVL
VYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLAC
AALWALLRLCLQRLGVGRWLAARAGGLRARGLREDARMSSRDGALVYHRLHQLHMTGKLG
GSHLSAVHMALSAVNLAECSGSCLPVATLGEIYVSAALRVKASLPRLLHFSSRVFLSSAR
QACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAVRSTPKDSIYSQAGNTVDPLAQVTQAFR
EHLLEKALYCVAQPRGEKIPSDGEGEYADALEYLQLLTSASDAAGANTQSFAIGSNMATV
TGCDLHSKWWSSVAVVIINWLQGDDAAAERLYPAAEHLPRSLQTAESPLPKASLNTFRAV
RAMLTKPENCQLSLSHSERASGLLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNVWR
LQQSSSPGGLSLQASPAELHGFQQDLSSLRKLAQSFRPAMRRLFLHEATARLMAGASPTR
THQLLDRSLRRRATPGAKTEECEMRPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLADA
ARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtcttttgacgatcagtcactggataatctggatccaaccatatccctaaat
gaccccagcgatattgacacggctctgctcaatgacatagatgacatgctgcagctcatc
aacacacaggacatggtggagttcaaccaggacatggcgggtctctttgacccccctcag
ttcacaggggtcacccctacccaggacctccctgccctcagcctgccccactccaccacc
tcccctccatccaacacctcctcaatcctgagcagcagcccccaccttgatgctctcctg
gggccccccatcatccgcagttcctcccccccagacaaggccttcncaccccccaccttc
cagcagtcgcccctggcccaagtcaccacctccacccctgtaccactgcctaggccgcag
ccagctccccagcagggctctccatcagcccaggctgctcagggtctcaggcagcccaag
gttgacctgcccctgccggtcctctcccccgcccctgttccagtccagcttcctccccca
gcctcctccccccatactgtacccggccagagccccgtgttcagcgccgccccccaagcc
ctgttcacctctcctgccctccagcagtctcaggcccacacccagcagatacggattaac
tacagcacccaaaatggctacaaagctgtcaatcatcaaggaggccccgcccagcccatg
gtcagcctgccgtcgtccccttccggtgttcagccaatgaccatccaggctctgaccacc
acggcccccatcctgaccacctcagcaagccccccagctcagaccatcgcatcacatcac
attcaacaagtattgctccagccccagtttatcaaggctgagtctctgctgctgaccacc
ctgaaccgtgacccctgtatggtcactactgtggcctctccatgcatcacctccctggcc
accaccacatcccagaccacccactcactgcaggctctgatgagtggtggcaccttcctg
accacagtgccagtgatgatggactctgacaagctgcccatcaaccgtatcacaatcagc
agtaaacctatgggcctgccccccaagggcgagaagcgcaccgcccacaacgccatcgag
aagcgctaccgctcatccatcaacgacaagatccttgagcttaaagacctggtggccggg
actgaggccaagctcaacaagtcggcaattctgaagaaggcaatagactacatccgctac
ctgcagcagtccaaccagaaactgaaaaaagagaacatggccctgaagatgtctgcccag
aagaacaagtctctgaaggacctggttgccatggaggtggatggcccacagacggacgta
aagagcgagctacccaccccgccgccatccgacgtgggctctcccacctcctactcccac
tgtggcagcgactcagaacccgacagccccatgggggaagacagcaagccggcggtcaat
ctgatggacacgtccgcgtccactccgggcagtgctggcatgctggaccgctcccgcatg
gcgctgtgcacattcaccttcctcttcctctccctcaatcccctggctgccatgctgtgt
ggagggatgggctccagcaccaccgctaacaaccaagcagtgcatcctgggacaggcagg
atcatgctgggcctagacaacgcagctgactcgtggggctggatggactgggtgctaccc
actctgttggtgtggctgctgaatggtgtgctggtggctggggttctggtcagagtgttg
gtctatggagagccagtcaccaggccccactctggatcctccgtgctgttctggaggcac
cgcaagcaggcagacctcgacctggcacggggagactttgcccaggccagtcagaaccta
tggacctgcctcaaggccctgggtcgccccttacccacctctcagttggacctggcctgt
gctgccctgtgggccctgctccgcctctgcctccagcgactaggggtgggtcgctggttg
gctgccagggctggggggctccgtgccagggggctccgggaggatgctcgcatgagcagt
cgcgacggtgccctggtctaccaccgcctgcaccagctgcacatgaccggtaagctgggc
ggtagccacctgtctgcggttcacatggctctgagtgctgtaaacctggccgagtgttca
ggctcctgtctccccgtggccacgctaggagagatctacgtctctgcagccctaagagtc
aaagccagcctacccagactccttcacttctcctcccgtgtgttcctgagcagtgcccgc
caggcttgtctctcctccagcggcagtgtccccccggccatgcagtggctctgtcaccct
ctgggccaccgcttctttgtggacggggactgggccgtccgcagcacccccaaagatagc
atctacagccaggcagggaacacagtggaccctctggcccaggtgacccaggcctttagg
gaacaccttttggagaaggctctatactgtgtggcccagccccggggggagaagatcccc
agtgatggagagggggagtatgcggatgctctggagtacctgcagctgttgactagtgca
tcagacgccgccggagcaaacacccagtcctttgccatcggatccaacatggccaccgtc
actggctgtgaccttcattccaaatggtggtcgtcggttgccgtggtgatcattaactgg
ctccaaggagacgacgcagcggctgagagactgtaccccgccgccgagcacctgccccgt
agtctacagactgcagagagtccgttgcccaaggcgtctttgaacacgttccgagcggtg
cgcgccatgctgaccaaaccagagaactgtcagctgagtctgagccacagtgagagggcc
agcggcctgctgagagacagcctcaacctgggaccacactgtcacagcagcagcctagac
aaggtggtccagttgctgctgtgtgacctgctgctggtgatgcggactaacgtgtggcgt
ctgcagcagagctccagtcccgggggtctctccttgcaggcctccccggccgagctgcac
ggcttccagcaggacctctcctccctcaggaagctggcccagagcttcaggcccgccatg
cgcaggttgtttcttcatgaggcaaccgccaggctgatggctggggccagtcccacgcga
acacatcagctcctggaccgctcgctcagacgcagagccacccccggagccaagacggag
gagtgtgagatgcgtcctggccagagggagcaggctgaggcggtgatgttggcgtgtcgc
tacctgcccccctccttcctgtcggcaccgggccagcgggtgggcatgctggcggacgca
gcccggacactggagaagctaggggacaagcgcaccctccacgactgccagcagatgatc
attaagctgggcagcggcaccactgtcacctctgcctag
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