Oncorhynchus gorbuscha (pink salmon): 124000026
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Entry
124000026 CDS
T07892
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04060
Cytokine-cytokine receptor interaction
ogo04217
Necroptosis
ogo04620
Toll-like receptor signaling pathway
ogo04621
NOD-like receptor signaling pathway
ogo04622
RIG-I-like receptor signaling pathway
ogo04623
Cytosolic DNA-sensing pathway
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124000026
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124000026
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124000026
04621 NOD-like receptor signaling pathway
124000026
04622 RIG-I-like receptor signaling pathway
124000026
04623 Cytosolic DNA-sensing pathway
124000026
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124000026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ogo04052
]
124000026
Cytokines and neuropeptides [BR:
ogo04052
]
Cytokines
Interferons
124000026
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
124000026
NCBI-ProteinID:
XP_046162071
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All DBs
Position
LG16:complement(30451003..30452030)
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AA seq
187 aa
AA seq
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MTLQTVTWMSAFLCLAQVCSMPMPCQLQGQLVRITHNLLRDMGGNFPLECLQENVFVAFP
ATAFATSGAPQLSSSGAKAIYETLKNIDTLFGADDLPTKWDQQKLENFQNIVYRQIEESK
CMMGSVDTSDYLIRTEGLKTYFGNIAAVLKEKNCSYCAWEVVRKELLYSLQFILEHNSDC
LLWANRT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcagactgtcacttggatgagcgccttcctctgcctcgcgcaagtttgctcc
atgcccatgccttgccagctacaaggacagctggtgcgaataacccacaacctactgaga
gacatggggggtaattttcctctggagtgcctgcaggagaatgtcttcgtggcattccca
gccaccgcatttgcaacctccggtgcgccacagttgagtagcagtggtgctaaggctatt
tatgagacattgaagaacatcgacacattgtttggagctgacgacctgcctactaagtgg
gatcaacagaagttggagaattttcagaatattgtataccgccagattgaagagagtaaa
tgtatgatgggcagtgtggataccagtgattatctcatcaggacagaaggactgaagacg
tactttgggaacattgcagcagtcctaaaagaaaagaattgcagttactgcgcctgggaa
gtggttcgaaaagagctcctgtacagcctacagttcattctggaacacaactctgattgc
cttctgtgggccaacagaacatga
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