Oncorhynchus gorbuscha (pink salmon): 124000032
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Entry
124000032 CDS
T07892
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04060
Cytokine-cytokine receptor interaction
ogo04217
Necroptosis
ogo04620
Toll-like receptor signaling pathway
ogo04621
NOD-like receptor signaling pathway
ogo04622
RIG-I-like receptor signaling pathway
ogo04623
Cytosolic DNA-sensing pathway
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124000032
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124000032
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124000032
04621 NOD-like receptor signaling pathway
124000032
04622 RIG-I-like receptor signaling pathway
124000032
04623 Cytosolic DNA-sensing pathway
124000032
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124000032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ogo04052
]
124000032
Cytokines and neuropeptides [BR:
ogo04052
]
Cytokines
Interferons
124000032
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
DUF4635
Motif
Other DBs
NCBI-GeneID:
124000032
NCBI-ProteinID:
XP_046162075
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All DBs
Position
LG16:complement(30410173..30413685)
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AA seq
175 aa
AA seq
DB search
MYTMQNWTCIFLIICSMQSVCHCCDWIRHHYGLLSAEYLSLLDQMGGDITKQNAPVLFPT
SLYRHIDDAEFEDKVIFLKETIYQITKLFDGNMKSVTWDKKNLDDFLNILERQLENLNSC
VSPAMKPERRLKRYFKKLNRKVLRKMNYSAQAWELIRKEMKRHLQRLDILAAQMY
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaatgcagaattggacgtgcatttttcttattatttgcagtatgcagagcgtg
tgtcattgctgtgactggatccgacaccactacggcctcttgagcgcagaatacctttcc
ctgctggaccagatgggaggagatatcacaaagcagaatgccccagtccttttcccaaca
tcactttacagacatatagatgatgctgagtttgaggacaaagtcatattcctgaaagag
accatctatcaaatcacaaaactgtttgatgggaatatgaaatctgtcacctgggacaag
aaaaacctggacgatttcctcaacattctagaacgccaattggagaaccttaattcctgt
gtatcacctgccatgaaacctgagaggagactgaaacggtacttcaagaagttgaatagg
aaggttctgagaaaaatgaactacagtgcacaggcgtgggagctcatcaggaaagagatg
aaacgtcatctgcaaagattggatatccttgcagcacagatgtactga
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